{"id":"https://openalex.org/W3131681028","doi":"https://doi.org/10.1117/12.2580907","title":"Synthetic atrophy for longitudinal surface-based cortical thickness measurement","display_name":"Synthetic atrophy for longitudinal surface-based cortical thickness measurement","publication_year":2021,"publication_date":"2021-02-13","ids":{"openalex":"https://openalex.org/W3131681028","doi":"https://doi.org/10.1117/12.2580907","mag":"3131681028","pmid":"https://pubmed.ncbi.nlm.nih.gov/34873357"},"language":"en","primary_location":{"id":"doi:10.1117/12.2580907","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2580907","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2021: Image Processing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8643351","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082563118","display_name":"Kathleen E. Larson","orcid":"https://orcid.org/0000-0002-1997-0248"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kathleen Larson","raw_affiliation_strings":["Vanderbilt University, Nashville, TN, USA","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Vanderbilt University, Nashville, TN, USA","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020532873","display_name":"\u0130pek O\u011fuz","orcid":"https://orcid.org/0000-0002-1403-2420"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ipek Oguz","raw_affiliation_strings":["Vanderbilt University, Nashville, TN, USA","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Vanderbilt University, Nashville, TN, USA","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5082563118"],"corresponding_institution_ids":["https://openalex.org/I200719446"],"apc_list":null,"apc_paid":null,"fwci":0.1375,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.4464066,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"11596","issue":null,"first_page":"125","last_page":"125"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9836000204086304,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ground-truth","display_name":"Ground truth","score":0.7702213525772095},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6609528660774231},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6284862160682678},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5944569706916809},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5517647862434387},{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.48987147212028503},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3882206678390503},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.3215215802192688}],"concepts":[{"id":"https://openalex.org/C146849305","wikidata":"https://www.wikidata.org/wiki/Q370766","display_name":"Ground truth","level":2,"score":0.7702213525772095},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6609528660774231},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6284862160682678},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5944569706916809},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5517647862434387},{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.48987147212028503},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3882206678390503},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.3215215802192688}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1117/12.2580907","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2580907","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2021: Image Processing","raw_type":"proceedings-article"},{"id":"pmid:34873357","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34873357","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8643351","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8643351","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8643351","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8643351","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3027020613","https://openalex.org/W2016533837","https://openalex.org/W3167885074","https://openalex.org/W2892386716","https://openalex.org/W1998563493","https://openalex.org/W4306164210","https://openalex.org/W4313316311","https://openalex.org/W4362608745","https://openalex.org/W2383143032","https://openalex.org/W1997160662"],"abstract_inverted_index":{"Difficulty":[0],"in":[1,8,100,125],"validating":[2],"accuracy":[3,73,158,170],"remains":[4],"a":[5,41,55,65,101,131],"substantial":[6],"setback":[7],"the":[9,19,80,106,112,122,157],"field":[10],"of":[11,21,75,96,121,135,160],"surface-based":[12,50,76],"cortical":[13,61,98,162,172],"thickness":[14,47],"(CT)":[15],"measurement":[16],"due":[17],"to":[18,32,63,90,115,153],"lack":[20],"experimental":[22],"validation":[23,74,159],"against":[24,171],"ground":[25,67],"truth.":[26],"Although":[27],"methods":[28],"have":[29],"been":[30],"developed":[31],"create":[33,64],"synthetic":[34,60],"datasets":[35],"for":[36,44,58,72,156],"this":[37,117],"purpose,":[38],"none":[39],"provide":[40],"robust":[42],"mechanism":[43],"measuring":[45,169],"exact":[46],"changes":[48],"with":[49],"approaches.":[51],"This":[52],"work":[53],"presents":[54],"registration-based":[56],"technique":[57],"inducing":[59],"atrophy":[62,99,118,136],"longitudinal,":[66],"truth":[68],"dataset":[69],"specifically":[70],"designed":[71],"CT":[77,154],"measurements.":[78],"Across":[79],"entire":[81],"brain,":[82],"we":[83,128],"show":[84,144],"our":[85,146,175],"method":[86,147,176],"can":[87,129,148],"induce":[88,116,130],"up":[89],"between":[91],"0.6":[92],"and":[93,164,183],"2.6":[94],"mm":[95],"localized":[97],"given":[102],"gyrus":[103],"depending":[104],"on":[105,179],"region's":[107],"original":[108,123],"thickness.":[109],"By":[110],"calculating":[111],"image":[113],"deformation":[114],"at":[119],"400%":[120],"resolution":[124,133],"each":[126],"direction,":[127],"sub-voxel":[132],"amount":[134],"while":[137],"minimizing":[138],"partial":[139],"volume":[140],"effects.":[141],"We":[142],"also":[143],"that":[145],"be":[149],"extended":[150],"beyond":[151],"application":[152],"measurements":[155],"longitudinal":[161],"segmentation":[163],"surface":[165],"reconstruction":[166],"pipelines":[167],"when":[168],"landmarks.":[173],"Importantly,":[174],"relies":[177],"exclusively":[178],"publicly":[180],"available":[181],"software":[182],"datasets.":[184]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
