{"id":"https://openalex.org/W3012180500","doi":"https://doi.org/10.1117/12.2549742","title":"A deep learning approach to assess the predominant tumor growth pattern in whole-slide images of lung adenocarcinoma","display_name":"A deep learning approach to assess the predominant tumor growth pattern in whole-slide images of lung adenocarcinoma","publication_year":2020,"publication_date":"2020-03-16","ids":{"openalex":"https://openalex.org/W3012180500","doi":"https://doi.org/10.1117/12.2549742","mag":"3012180500"},"language":"en","primary_location":{"id":"doi:10.1117/12.2549742","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2549742","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2020: Digital Pathology","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076314803","display_name":"\u017baneta \u015awiderska-Chadaj","orcid":"https://orcid.org/0000-0003-2115-9822"},"institutions":[{"id":"https://openalex.org/I108403487","display_name":"Warsaw University of Technology","ror":"https://ror.org/00y0xnp53","country_code":"PL","type":"education","lineage":["https://openalex.org/I108403487"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL","PL"],"is_corresponding":true,"raw_author_name":"Zaneta Swiderska-Chadaj","raw_affiliation_strings":["Radboud Univ. Medical Ctr. (Netherlands)","Warsaw Univ. of Technology (Poland)"],"affiliations":[{"raw_affiliation_string":"Radboud Univ. Medical Ctr. (Netherlands)","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"Warsaw Univ. of Technology (Poland)","institution_ids":["https://openalex.org/I108403487"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008111236","display_name":"Karolina Nurzy\u01f9ska","orcid":"https://orcid.org/0000-0001-5137-5732"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Karolina Nurzynska","raw_affiliation_strings":["Silesian Univ. of Technology (Poland)"],"affiliations":[{"raw_affiliation_string":"Silesian Univ. of Technology (Poland)","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059029192","display_name":"Bart\u0142omiej Grala","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bartlomiej Grala","raw_affiliation_strings":["Military Institute of Medicine (Poland)"],"affiliations":[{"raw_affiliation_string":"Military Institute of Medicine (Poland)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051650713","display_name":"Katrien Gr\u00fcnberg","orcid":"https://orcid.org/0000-0003-1164-4365"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Katrien Gr\u00fcnberg","raw_affiliation_strings":["Radboud Univ. Medical Ctr. (Netherlands)"],"affiliations":[{"raw_affiliation_string":"Radboud Univ. Medical Ctr. (Netherlands)","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091439943","display_name":"Lieke van der Woude","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Lieke van der Woude","raw_affiliation_strings":["Radboud Univ. Medical Ctr. (Netherlands)"],"affiliations":[{"raw_affiliation_string":"Radboud Univ. Medical Ctr. (Netherlands)","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112471593","display_name":"Monika Looijen-Salamon","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Monika Looijen-Salamon","raw_affiliation_strings":["Radboud Univ. Medical Ctr. (Netherlands)"],"affiliations":[{"raw_affiliation_string":"Radboud Univ. Medical Ctr. (Netherlands)","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017705483","display_name":"Ann E. Walts","orcid":"https://orcid.org/0000-0002-6893-5748"},"institutions":[{"id":"https://openalex.org/I1282927834","display_name":"Cedars-Sinai Medical Center","ror":"https://ror.org/02pammg90","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1282927834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ann E. Walts","raw_affiliation_strings":["Cedars-Sinai Medical Ctr. (United States)"],"affiliations":[{"raw_affiliation_string":"Cedars-Sinai Medical Ctr. (United States)","institution_ids":["https://openalex.org/I1282927834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062762062","display_name":"Tomasz Markiewicz","orcid":"https://orcid.org/0000-0001-6652-1915"},"institutions":[{"id":"https://openalex.org/I108403487","display_name":"Warsaw University of Technology","ror":"https://ror.org/00y0xnp53","country_code":"PL","type":"education","lineage":["https://openalex.org/I108403487"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Tomasz Markiewicz","raw_affiliation_strings":["Military Institute of Medicine (Poland)","Warsaw Univ. of Technology (Poland)"],"affiliations":[{"raw_affiliation_string":"Military Institute of Medicine (Poland)","institution_ids":[]},{"raw_affiliation_string":"Warsaw Univ. of Technology (Poland)","institution_ids":["https://openalex.org/I108403487"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002905948","display_name":"Francesco Ciompi","orcid":"https://orcid.org/0000-0001-8327-9606"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Francesco Ciompi","raw_affiliation_strings":["Radboud Univ. Medical Ctr. (Netherlands)"],"affiliations":[{"raw_affiliation_string":"Radboud Univ. Medical Ctr. (Netherlands)","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012620880","display_name":"Arkadiusz Gertych","orcid":"https://orcid.org/0000-0002-3107-602X"},"institutions":[{"id":"https://openalex.org/I1282927834","display_name":"Cedars-Sinai Medical Center","ror":"https://ror.org/02pammg90","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1282927834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arkadiusz Gertych","raw_affiliation_strings":["Cedars-Sinai Medical Ctr. (United States)"],"affiliations":[{"raw_affiliation_string":"Cedars-Sinai Medical Ctr. (United States)","institution_ids":["https://openalex.org/I1282927834"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5076314803"],"corresponding_institution_ids":["https://openalex.org/I108403487","https://openalex.org/I145872427"],"apc_list":null,"apc_paid":null,"fwci":0.1101,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.46955932,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"12","last_page":"12"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10202","display_name":"Lung Cancer Diagnosis and Treatment","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cribriform","display_name":"Cribriform","score":0.9236915707588196},{"id":"https://openalex.org/keywords/concordance","display_name":"Concordance","score":0.7497553825378418},{"id":"https://openalex.org/keywords/adenocarcinoma","display_name":"Adenocarcinoma","score":0.5983426570892334},{"id":"https://openalex.org/keywords/lung","display_name":"Lung","score":0.5246567726135254},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.5217077136039734},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.44565463066101074},{"id":"https://openalex.org/keywords/lung-tumor","display_name":"Lung tumor","score":0.41501671075820923},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4042922258377075},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3915584087371826},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.17760097980499268},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.13707765936851501},{"id":"https://openalex.org/keywords/carcinoma","display_name":"Carcinoma","score":0.1369883418083191}],"concepts":[{"id":"https://openalex.org/C2909818935","wikidata":"https://www.wikidata.org/wiki/Q5184902","display_name":"Cribriform","level":3,"score":0.9236915707588196},{"id":"https://openalex.org/C160798450","wikidata":"https://www.wikidata.org/wiki/Q4230870","display_name":"Concordance","level":2,"score":0.7497553825378418},{"id":"https://openalex.org/C2781182431","wikidata":"https://www.wikidata.org/wiki/Q356033","display_name":"Adenocarcinoma","level":3,"score":0.5983426570892334},{"id":"https://openalex.org/C2777714996","wikidata":"https://www.wikidata.org/wiki/Q7886","display_name":"Lung","level":2,"score":0.5246567726135254},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.5217077136039734},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.44565463066101074},{"id":"https://openalex.org/C3018373657","wikidata":"https://www.wikidata.org/wiki/Q15124212","display_name":"Lung tumor","level":3,"score":0.41501671075820923},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4042922258377075},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3915584087371826},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.17760097980499268},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.13707765936851501},{"id":"https://openalex.org/C2777546739","wikidata":"https://www.wikidata.org/wiki/Q33525","display_name":"Carcinoma","level":2,"score":0.1369883418083191}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2549742","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2549742","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2020: Digital Pathology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1601684588","https://openalex.org/W4224255738","https://openalex.org/W2747512347","https://openalex.org/W2388915439","https://openalex.org/W2066500467","https://openalex.org/W4389519690","https://openalex.org/W3044398268","https://openalex.org/W4392247863","https://openalex.org/W2363881220","https://openalex.org/W4211185973"],"abstract_inverted_index":{"When":[0],"diagnosing":[1],"and":[2,54,66,68,121,175,189],"reporting":[3],"lung":[4],"adenocarcinoma":[5],"(LAC),":[6],"pathologists":[7],"currently":[8],"include":[9],"an":[10,122],"assessment":[11,183],"of":[12,32,58,146,184],"histologic":[13],"tumor":[14,42,60,134,155,192],"growth":[15,20,43,61,135,156,165,193,204],"patterns":[16,62],"because":[17],"the":[18,29,111,115,118,127,132,161,199],"predominant":[19,133,191,202],"pattern":[21,44,136],"has":[22],"been":[23],"reported":[24],"to":[25,37,52,126],"impact":[26],"prognosis.":[27],"However,":[28],"subjective":[30],"nature":[31],"manual":[33],"slide":[34,73,113],"evaluation":[35],"contributes":[36],"suboptimal":[38],"inter-pathologist":[39],"variability":[40],"in":[41,71,130],"assessment.":[45],"We":[46,80],"applied":[47],"a":[48,82,107,144],"deep":[49],"learning":[50],"approach":[51],"identify":[53],"automatically":[55],"delineate":[56],"areas":[57,70],"four":[59],"(solid,":[63],"acinar,":[64,188],"micropapillary,":[65],"cribriform)":[67],"non-tumor":[69],"whole":[72],"images":[74],"(WSI)":[75],"from":[76,87],"resected":[77],"LAC":[78],"specimens.":[79],"trained":[81],"DenseNet":[83,119,128,182],"model":[84,95,120],"using":[85,98],"patches":[86],"109":[88],"slides":[89,149],"collected":[90,105],"at":[91,106],"two":[92],"institutions.":[93],"The":[94],"was":[96,137],"tested":[97],"56":[99],"WSIs":[100,185,200],"including":[101],"20":[102],"that":[103,150,181],"were":[104,151],"third":[108],"institution.":[109],"Using":[110,143],"same":[112],"set,":[114],"concordance":[116],"between":[117],"experienced":[123],"pathologist":[124],"(blinded":[125],"results)":[129],"determining":[131],"substantial":[138],"(kappa":[139],"score":[140],"=":[141],"0.603).":[142],"subset":[145],"36":[147],"test":[148],"manually":[152],"annotated":[153],"for":[154,163,198],"patterns,":[157],"we":[158],"also":[159],"measured":[160],"F1-score":[162],"each":[164],"pattern:":[166],"0.95":[167],"(solid),":[168],"0.78":[169],"(acinar),":[170],"0.76":[171],"(micropapillary),":[172],"0.28":[173],"(cribriform)":[174],"0.97":[176],"(non-tumor).":[177],"Our":[178],"results":[179],"suggest":[180],"with":[186,201],"solid,":[187],"micropapillary":[190],"is":[194],"more":[195],"robust":[196],"than":[197],"cribriform":[203],"which":[205],"are":[206],"less":[207],"frequently":[208],"encountered.":[209]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
