{"id":"https://openalex.org/W2922105036","doi":"https://doi.org/10.1117/12.2512986","title":"Semi-automatic segmentation of JIA-induced inflammation in MRI images of ankle joints","display_name":"Semi-automatic segmentation of JIA-induced inflammation in MRI images of ankle joints","publication_year":2019,"publication_date":"2019-03-15","ids":{"openalex":"https://openalex.org/W2922105036","doi":"https://doi.org/10.1117/12.2512986","mag":"2922105036"},"language":"en","primary_location":{"id":"doi:10.1117/12.2512986","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2512986","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2019: Image Processing","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100378997","display_name":"Anqi Wang","orcid":"https://orcid.org/0000-0002-3369-1499"},"institutions":[{"id":"https://openalex.org/I3019423309","display_name":"Fraunhofer Institute for Computer Graphics Research","ror":"https://ror.org/04gmsar03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I3019423309","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I31512782","display_name":"Technische Universit\u00e4t Darmstadt","ror":"https://ror.org/05n911h24","country_code":"DE","type":"education","lineage":["https://openalex.org/I31512782"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Anqi Wang","raw_affiliation_strings":["Fraunhofer-Institut f\u00fcr Graphische Datenverarbeitung (Germany)","Technische Univ. Darmstadt (Germany)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer-Institut f\u00fcr Graphische Datenverarbeitung (Germany)","institution_ids":["https://openalex.org/I3019423309"]},{"raw_affiliation_string":"Technische Univ. Darmstadt (Germany)","institution_ids":["https://openalex.org/I31512782"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042407205","display_name":"Andreas Franke","orcid":"https://orcid.org/0000-0002-7504-9015"},"institutions":[{"id":"https://openalex.org/I31512782","display_name":"Technische Universit\u00e4t Darmstadt","ror":"https://ror.org/05n911h24","country_code":"DE","type":"education","lineage":["https://openalex.org/I31512782"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Franke","raw_affiliation_strings":["Technische Univ. Darmstadt (Germany)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technische Univ. Darmstadt (Germany)","institution_ids":["https://openalex.org/I31512782"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077049258","display_name":"Stefan Wesarg","orcid":null},"institutions":[{"id":"https://openalex.org/I3019423309","display_name":"Fraunhofer Institute for Computer Graphics Research","ror":"https://ror.org/04gmsar03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I3019423309","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I31512782","display_name":"Technische Universit\u00e4t Darmstadt","ror":"https://ror.org/05n911h24","country_code":"DE","type":"education","lineage":["https://openalex.org/I31512782"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Wesarg","raw_affiliation_strings":["Fraunhofer-Institut f\u00fcr Graphische Datenverarbeitung (Germany)","Technische Univ. Darmstadt (Germany)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer-Institut f\u00fcr Graphische Datenverarbeitung (Germany)","institution_ids":["https://openalex.org/I3019423309"]},{"raw_affiliation_string":"Technische Univ. Darmstadt (Germany)","institution_ids":["https://openalex.org/I31512782"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.11029412,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"8680","issue":null,"first_page":"123","last_page":"123"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11616","display_name":"Autoimmune and Inflammatory Disorders Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11616","display_name":"Autoimmune and Inflammatory Disorders Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10308","display_name":"Systemic Lupus Erythematosus Research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2745","display_name":"Rheumatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11078","display_name":"Inflammasome and immune disorders","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ankle","display_name":"Ankle","score":0.7406187057495117},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.58788001537323},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5220834612846375},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5199869275093079},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.48543792963027954},{"id":"https://openalex.org/keywords/inflammation","display_name":"Inflammation","score":0.46182140707969666},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.42289143800735474},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.41177991032600403},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30969083309173584},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.23975640535354614},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.14130210876464844},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.09871011972427368}],"concepts":[{"id":"https://openalex.org/C2778640784","wikidata":"https://www.wikidata.org/wiki/Q168002","display_name":"Ankle","level":2,"score":0.7406187057495117},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.58788001537323},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5220834612846375},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5199869275093079},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.48543792963027954},{"id":"https://openalex.org/C2776914184","wikidata":"https://www.wikidata.org/wiki/Q101991","display_name":"Inflammation","level":2,"score":0.46182140707969666},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.42289143800735474},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.41177991032600403},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30969083309173584},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.23975640535354614},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.14130210876464844},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.09871011972427368}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1117/12.2512986","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2512986","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2019: Image Processing","raw_type":"proceedings-article"},{"id":"pmh:oai:fraunhofer.de:N-559230","is_oa":false,"landing_page_url":"http://publica.fraunhofer.de/documents/N-559230.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer IGD","raw_type":"Conference Paper"},{"id":"pmh:oai:publica.fraunhofer.de:publica/405280","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/405280","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"conference paper"},{"id":"pmh:oai:tubiblio.ulb.tu-darmstadt.de:120041","is_oa":false,"landing_page_url":"http://tubiblio.ulb.tu-darmstadt.de/120041/","pdf_url":null,"source":{"id":"https://openalex.org/S4377196390","display_name":"TUbilio (Technical University of Darmstadt)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I31512782","host_organization_name":"Technische Universit\u00e4t Darmstadt","host_organization_lineage":["https://openalex.org/I31512782"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Konferenzver\u00f6ffentlichung"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.5400000214576721,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W49955865","https://openalex.org/W1967494366","https://openalex.org/W1998348476","https://openalex.org/W2041995828","https://openalex.org/W2104276184","https://openalex.org/W2134389576","https://openalex.org/W2141780216","https://openalex.org/W2147982842","https://openalex.org/W2157848968","https://openalex.org/W2170741744","https://openalex.org/W2419423779","https://openalex.org/W6679433236"],"related_works":["https://openalex.org/W2056518890","https://openalex.org/W2356887275","https://openalex.org/W2966270549","https://openalex.org/W2158386141","https://openalex.org/W2131951563","https://openalex.org/W4245580097","https://openalex.org/W3029574114","https://openalex.org/W2896517724","https://openalex.org/W2986995742","https://openalex.org/W1522196789"],"abstract_inverted_index":{"The":[0,198],"autoimmune":[1],"disease":[2,38],"Juvenile":[3],"Idiopathic":[4],"Arthritis":[5],"(JIA)":[6],"affects":[7],"children":[8],"of":[9,18,29,48,54,86,146,167,206],"under":[10],"16":[11],"years":[12],"and":[13,40,65,73,79,100,179,195,213],"leads":[14],"to":[15,35,41,95,117,141,192],"the":[16,37,60,77,92,105,119,165,193,215],"symptom":[17],"inflamed":[19,31,97,160],"synovial":[20,161],"membranes":[21,32,162],"in":[22,51,99,104,122,164],"affected":[23],"joints.":[24],"In":[25,75],"clinical":[26,210],"practice,":[27],"characteristics":[28],"these":[30,128],"are":[33,131,138,150],"used":[34],"stage":[36],"progression":[39],"predict":[42],"erosive":[43],"bone":[44],"damage.":[45],"Manual":[46],"outlining":[47],"inflammatory":[49],"regions":[50,98],"each":[52,142],"slide":[53],"a":[55,83,123,185,204],"MRI":[56,124,211],"dataset":[57],"is":[58,70,82,157],"still":[59],"gold":[61],"standard":[62],"for":[63],"detection":[64],"quantification,":[66],"however,":[67],"this":[68],"process":[69],"very":[71],"tiresome":[72],"time-consuming.":[74],"addition,":[76],"inter-":[78],"intra-observer":[80],"variability":[81],"known":[84,158],"problem":[85],"human":[87,106],"annotators.":[88],"We":[89],"have":[90],"developed":[91],"first":[93],"method":[94,199],"detect":[96],"around":[101],"major":[102],"joints":[103,130,194],"ankle.":[107],"First,":[108],"we":[109,169],"use":[110],"an":[111],"adapted":[112],"coupled":[113],"shape":[114],"model":[115],"framework":[116],"segment":[118],"ankle":[120],"bones":[121,137],"dataset.":[125],"Based":[126],"on":[127,203],"segmentations,":[129],"defined":[132],"as":[133,177],"locations":[134],"where":[135],"two":[136],"particularly":[139],"close":[140],"other.":[143],"A":[144],"number":[145],"potential":[147],"inflammation":[148],"candidates":[149],"generated":[151],"using":[152,182],"multi-level":[153],"thresholding.":[154],"Since":[155],"it":[156],"that":[159],"occur":[163],"proximity":[166],"joints,":[168],"filter":[170],"out":[171],"structures":[172],"with":[173],"similar":[174],"intensities":[175],"such":[176],"vessels":[178],"tendons":[180],"sheaths":[181],"not":[183],"only":[184],"vesselness":[186],"filter,":[187],"but":[188],"also":[189],"their":[190,196],"distance":[191],"size.":[197],"has":[200],"been":[201],"evaluated":[202],"set":[205],"10":[207],"manually":[208],"annotated":[209],"datasets":[212],"achieved":[214],"following":[216],"results:":[217],"Precision":[218],"0.6785":[219],"&plusmn;":[220,224,228],"0.1584,":[221],"Recall":[222],"0.5388":[223],"0.1213,":[225],"DICE":[226],"0.5696":[227],"0.0976.":[229]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
