{"id":"https://openalex.org/W2793031304","doi":"https://doi.org/10.1117/12.2295249","title":"Computational analysis of the structural progression of human glomeruli in diabetic nephropathy","display_name":"Computational analysis of the structural progression of human glomeruli in diabetic nephropathy","publication_year":2018,"publication_date":"2018-03-06","ids":{"openalex":"https://openalex.org/W2793031304","doi":"https://doi.org/10.1117/12.2295249","mag":"2793031304"},"language":"en","primary_location":{"id":"doi:10.1117/12.2295249","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2295249","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2018: Digital Pathology","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044061952","display_name":"Pinaki Sarder","orcid":"https://orcid.org/0000-0003-2450-5233"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Pinaki Sarder","raw_affiliation_strings":["Univ. at Buffalo (United States)"],"affiliations":[{"raw_affiliation_string":"Univ. at Buffalo (United States)","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041397853","display_name":"Brandon Ginley","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandon G. Ginley","raw_affiliation_strings":["Univ. at Buffalo (United States)"],"affiliations":[{"raw_affiliation_string":"Univ. at Buffalo (United States)","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110245968","display_name":"John E. Tomaszewski","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John E. Tomaszewski","raw_affiliation_strings":["Univ. at Buffalo (United States)"],"affiliations":[{"raw_affiliation_string":"Univ. at Buffalo (United States)","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048109211","display_name":"Kuang\u2010Yu Jen","orcid":"https://orcid.org/0000-0003-2815-5912"},"institutions":[{"id":"https://openalex.org/I180670191","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54","country_code":"US","type":"education","lineage":["https://openalex.org/I180670191"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kuang-Yu Jen","raw_affiliation_strings":["Univ. of California, San Francisco (United States)"],"affiliations":[{"raw_affiliation_string":"Univ. of California, San Francisco (United States)","institution_ids":["https://openalex.org/I180670191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031318134","display_name":"Agnes B. Fogo","orcid":"https://orcid.org/0000-0003-3698-8527"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Agnes Fogo","raw_affiliation_strings":["Vanderbilt Univ. School of Medicine (United States)"],"affiliations":[{"raw_affiliation_string":"Vanderbilt Univ. School of Medicine (United States)","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070827775","display_name":"Sanjay Jain","orcid":"https://orcid.org/0000-0003-2804-127X"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanjay Jain","raw_affiliation_strings":["Washington Univ. School of Medicine in St. Louis (United States)"],"affiliations":[{"raw_affiliation_string":"Washington Univ. School of Medicine in St. Louis (United States)","institution_ids":["https://openalex.org/I204465549"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5044061952"],"corresponding_institution_ids":["https://openalex.org/I63190737"],"apc_list":null,"apc_paid":null,"fwci":1.1026,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.73888889,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"6","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10408","display_name":"Chronic Kidney Disease and Diabetes","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10408","display_name":"Chronic Kidney Disease and Diabetes","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11029","display_name":"Renal Diseases and Glomerulopathies","score":0.9120000004768372,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.5881500840187073},{"id":"https://openalex.org/keywords/diabetic-nephropathy","display_name":"Diabetic nephropathy","score":0.51455157995224},{"id":"https://openalex.org/keywords/glomerulus","display_name":"Glomerulus","score":0.512612521648407},{"id":"https://openalex.org/keywords/renal-glomerulus","display_name":"Renal glomerulus","score":0.5113694071769714},{"id":"https://openalex.org/keywords/renal-function","display_name":"Renal function","score":0.5105522871017456},{"id":"https://openalex.org/keywords/kidney","display_name":"Kidney","score":0.5012397766113281},{"id":"https://openalex.org/keywords/nephropathy","display_name":"Nephropathy","score":0.4873009920120239},{"id":"https://openalex.org/keywords/compartment","display_name":"Compartment (ship)","score":0.4526493549346924},{"id":"https://openalex.org/keywords/pathological","display_name":"Pathological","score":0.4326309561729431},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.4139050841331482},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.357207715511322},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3503953516483307},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24528765678405762},{"id":"https://openalex.org/keywords/glomerulonephritis","display_name":"Glomerulonephritis","score":0.2366173267364502},{"id":"https://openalex.org/keywords/diabetes-mellitus","display_name":"Diabetes mellitus","score":0.23298093676567078},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.22028186917304993},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.09869128465652466}],"concepts":[{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.5881500840187073},{"id":"https://openalex.org/C2779922275","wikidata":"https://www.wikidata.org/wiki/Q1129105","display_name":"Diabetic nephropathy","level":3,"score":0.51455157995224},{"id":"https://openalex.org/C2778305430","wikidata":"https://www.wikidata.org/wiki/Q26261754","display_name":"Glomerulus","level":3,"score":0.512612521648407},{"id":"https://openalex.org/C3018920779","wikidata":"https://www.wikidata.org/wiki/Q909882","display_name":"Renal glomerulus","level":4,"score":0.5113694071769714},{"id":"https://openalex.org/C159641895","wikidata":"https://www.wikidata.org/wiki/Q108377937","display_name":"Renal function","level":2,"score":0.5105522871017456},{"id":"https://openalex.org/C2780091579","wikidata":"https://www.wikidata.org/wiki/Q9377","display_name":"Kidney","level":2,"score":0.5012397766113281},{"id":"https://openalex.org/C2781184683","wikidata":"https://www.wikidata.org/wiki/Q1054718","display_name":"Nephropathy","level":3,"score":0.4873009920120239},{"id":"https://openalex.org/C203635412","wikidata":"https://www.wikidata.org/wiki/Q17007432","display_name":"Compartment (ship)","level":2,"score":0.4526493549346924},{"id":"https://openalex.org/C207886595","wikidata":"https://www.wikidata.org/wiki/Q1456138","display_name":"Pathological","level":2,"score":0.4326309561729431},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.4139050841331482},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.357207715511322},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3503953516483307},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24528765678405762},{"id":"https://openalex.org/C2780368995","wikidata":"https://www.wikidata.org/wiki/Q605006","display_name":"Glomerulonephritis","level":3,"score":0.2366173267364502},{"id":"https://openalex.org/C555293320","wikidata":"https://www.wikidata.org/wiki/Q12206","display_name":"Diabetes mellitus","level":2,"score":0.23298093676567078},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.22028186917304993},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.09869128465652466},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2295249","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2295249","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2018: Digital Pathology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1597336200","https://openalex.org/W2003099669","https://openalex.org/W2005423095","https://openalex.org/W2013926666","https://openalex.org/W2053489483","https://openalex.org/W2072070798","https://openalex.org/W2098162793","https://openalex.org/W2136490577","https://openalex.org/W2143580981","https://openalex.org/W2410665890","https://openalex.org/W2592662298","https://openalex.org/W2915967003","https://openalex.org/W6635816984","https://openalex.org/W6651805951"],"related_works":["https://openalex.org/W2408813616","https://openalex.org/W1974938188","https://openalex.org/W2290657372","https://openalex.org/W2460480165","https://openalex.org/W2812336","https://openalex.org/W1982250022","https://openalex.org/W2326210172","https://openalex.org/W3094418070","https://openalex.org/W2070105522","https://openalex.org/W1537629816"],"abstract_inverted_index":{"The":[0,38,93,139],"glomerulus":[1],"is":[2,13,49,65,85,106],"the":[3,10,76,86,107,162],"primary":[4],"compartment":[5,125],"of":[6,16,80,98,131,221,240],"blood":[7],"filtration":[8,36],"in":[9,46,133],"kidney.":[11],"It":[12],"a":[14,59,142,157],"sphere":[15],"bundled,":[17],"fenestrated":[18],"capillaries":[19],"that":[20],"selectively":[21],"allows":[22],"solute":[23],"loss.":[24],"Structural":[25],"damages":[26],"to":[27,31,41,89,96,121,170,232],"glomerular":[28,43,124,222],"micro-compartments":[29,223],"lead":[30],"physiological":[32],"failures":[33],"which":[34],"influence":[35],"efficacy.":[37],"sole":[39],"way":[40],"confirm":[42],"structural":[44],"damage":[45],"renal":[47,104,137,209,241],"pathology":[48,105],"by":[50],"examining":[51],"histopathological":[52,100],"or":[53],"immunofluorescence":[54],"stained":[55],"needle":[56],"biopsies":[57,199],"under":[58],"light":[60],"microscope.":[61],"However,":[62],"this":[63,91,166],"method":[64,167,216],"extremely":[66],"tedious":[67],"and":[68,71,78,127,135,152,180,204,224],"time":[69],"consuming,":[70],"requires":[72],"manual":[73,234],"scoring":[74],"on":[75,161,188],"number":[77],"volume":[79],"structures.":[81],"Computational":[82],"image":[83],"analysis":[84],"perfect":[87],"tool":[88],"ease":[90,233],"burden.":[92],"major":[94],"obstacle":[95],"development":[97],"digital":[99],"quantification":[101],"protocols":[102],"for":[103,148,154,229],"extreme":[108],"heterogeneity":[109],"present":[110,116],"within":[111],"kidney":[112],"tissue.":[113,138],"Here":[114],"we":[115],"an":[117],"automated":[118],"computational":[119,219],"pipeline":[120],"1)":[122],"segment":[123],"boundaries":[126],"2)":[128],"quantify":[129],"features":[130],"compartments,":[132],"healthy":[134],"diseased":[136],"segmentation":[140,150],"involves":[141],"two":[143],"stage":[144,173,181],"process,":[145],"one":[146],"step":[147],"rough":[149],"generation":[151],"another":[153],"refinement.":[155],"Using":[156],"Na\u00efve":[158],"Bayesian":[159],"classifier":[160],"resulting":[163],"feature":[164],"set,":[165],"was":[168],"able":[169],"distinguish":[171],"pathological":[172],"IIa":[174],"from":[175,183,194],"III":[176,184],"with":[177,185,200,211,237],"0.89/0.93":[178],"sensitivity/specificity":[179],"IIb":[182],"0.7/0.8":[186],"sensitivity/specificity,":[187],"<i>n</i>":[189,195,205],"&equals;":[190,196,206],"514":[191],"glomeruli":[192],"taken":[193],"13":[197],"human":[198,208],"diagnosed":[201],"diabetic":[202],"nephropathy,":[203],"5":[207],"tissues":[210],"no":[212],"histological":[213],"abnormalities.":[214],"Our":[215],"will":[217],"simplify":[218],"partitioning":[220],"subsequent":[225],"quantification.":[226],"We":[227],"aim":[228],"our":[230],"methods":[231],"labor":[235],"associated":[236],"clinical":[238],"diagnosis":[239],"disease.":[242]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
