{"id":"https://openalex.org/W2963224795","doi":"https://doi.org/10.1117/12.2281509","title":"Improved stability of whole brain surface parcellation with multi-atlas segmentation","display_name":"Improved stability of whole brain surface parcellation with multi-atlas segmentation","publication_year":2018,"publication_date":"2018-03-02","ids":{"openalex":"https://openalex.org/W2963224795","doi":"https://doi.org/10.1117/12.2281509","mag":"2963224795","pmid":"https://pubmed.ncbi.nlm.nih.gov/29910528"},"language":"en","primary_location":{"id":"doi:10.1117/12.2281509","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2281509","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2018: Image Processing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5998819","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067191302","display_name":"Yuankai Huo","orcid":"https://orcid.org/0000-0002-2096-8065"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yuankai Huo","raw_affiliation_strings":["Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048972725","display_name":"Shunxing Bao","orcid":"https://orcid.org/0000-0001-6376-4292"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shunxing Bao","raw_affiliation_strings":["Computer Science, Vanderbilt University, Nashville, TN, USA 37235","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Computer Science, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075735203","display_name":"Bennett A. Landman","orcid":"https://orcid.org/0000-0001-5733-2127"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bennett A. Landman","raw_affiliation_strings":["Biomedical Engineering, Vanderbilt University, Nashville, TN, USA 37235","Computer Science, Vanderbilt University, Nashville, TN, USA 37235","Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Biomedical Engineering, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":[]},{"raw_affiliation_string":"Computer Science, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055625757","display_name":"Prasanna Parvathaneni","orcid":"https://orcid.org/0000-0001-8813-2494"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Prasanna Parvathaneni","raw_affiliation_strings":["Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","Vanderbilt Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235","institution_ids":["https://openalex.org/I200719446"]},{"raw_affiliation_string":"Vanderbilt Univ. (United States)","institution_ids":["https://openalex.org/I200719446"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5067191302"],"corresponding_institution_ids":["https://openalex.org/I200719446"],"apc_list":null,"apc_paid":null,"fwci":1.079,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.79451326,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"10574","issue":null,"first_page":"113","last_page":"113"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7930550575256348},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6792256236076355},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.6031374931335449},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5939000248908997},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5406107902526855},{"id":"https://openalex.org/keywords/surface-reconstruction","display_name":"Surface reconstruction","score":0.5019040107727051},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.48572832345962524},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.4748288094997406},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.46657952666282654},{"id":"https://openalex.org/keywords/brain-atlas","display_name":"Brain atlas","score":0.43791553378105164},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.43045574426651},{"id":"https://openalex.org/keywords/surface","display_name":"Surface (topology)","score":0.412079781293869},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.41063764691352844},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1802176535129547},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.16705432534217834},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.12805193662643433},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.08425712585449219},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.07703244686126709},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.07452565431594849}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7930550575256348},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6792256236076355},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.6031374931335449},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5939000248908997},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5406107902526855},{"id":"https://openalex.org/C20885615","wikidata":"https://www.wikidata.org/wiki/Q825595","display_name":"Surface reconstruction","level":3,"score":0.5019040107727051},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.48572832345962524},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.4748288094997406},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.46657952666282654},{"id":"https://openalex.org/C2780972224","wikidata":"https://www.wikidata.org/wiki/Q17047956","display_name":"Brain atlas","level":2,"score":0.43791553378105164},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.43045574426651},{"id":"https://openalex.org/C2776799497","wikidata":"https://www.wikidata.org/wiki/Q484298","display_name":"Surface (topology)","level":2,"score":0.412079781293869},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.41063764691352844},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1802176535129547},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.16705432534217834},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.12805193662643433},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.08425712585449219},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.07703244686126709},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.07452565431594849},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1117/12.2281509","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2281509","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Imaging 2018: Image Processing","raw_type":"proceedings-article"},{"id":"pmid:29910528","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29910528","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:europepmc.org:4951647","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5998819","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5998819","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5998819","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5998819","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5998819","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1954335072","https://openalex.org/W1993313688","https://openalex.org/W2007581301","https://openalex.org/W2082939309","https://openalex.org/W2086456561","https://openalex.org/W2113319997","https://openalex.org/W2140854449","https://openalex.org/W2145140396","https://openalex.org/W2151130155","https://openalex.org/W2151721316","https://openalex.org/W2162261751","https://openalex.org/W2302994076","https://openalex.org/W2332496147","https://openalex.org/W2391545620","https://openalex.org/W2524177541","https://openalex.org/W2538808881","https://openalex.org/W2751344310","https://openalex.org/W4241074797","https://openalex.org/W4252684946","https://openalex.org/W6729159708"],"related_works":["https://openalex.org/W3214912135","https://openalex.org/W4387252449","https://openalex.org/W2012519212","https://openalex.org/W4249039539","https://openalex.org/W1523541591","https://openalex.org/W2592984741","https://openalex.org/W1592689442","https://openalex.org/W1967068856","https://openalex.org/W2055554484","https://openalex.org/W2098852508"],"abstract_inverted_index":{"Whole":[0],"brain":[1,12,30],"segmentation":[2,16,25,134],"and":[3,111,123,190,206],"cortical":[4,128,230],"surface":[5,43,75,96,105,136],"parcellation":[6,76,97,106,137],"are":[7,115,215,218],"essential":[8],"in":[9],"understanding":[10],"the":[11,23,28,36,58,84,94,104,108,146,160,197,213,223],"anatomical-functional":[13],"relationship.":[14],"Multi-atlas":[15,49],"has":[17,39],"been":[18,40],"regarded":[19],"as":[20,222],"one":[21],"of":[22,86,148,229],"leading":[24],"methods":[26],"for":[27,179,187,193,203,209],"whole":[29],"segmentation.":[31],"In":[32],"our":[33],"recent":[34],"work,":[35],"multi-atlas":[37],"technique":[38],"adapted":[41],"to":[42,102,165],"reconstruction":[44],"using":[45,131],"a":[46,73,132,140,167],"method":[47,54,99,199],"called":[48],"CRUISE":[50],"(MaCRUISE).":[51],"The":[52],"MaCRUISE":[53,95],"not":[55,78,219],"only":[56],"performed":[57],"consistent":[59],"volume-surface":[60],"analyses":[61,90],"but":[62,217],"also":[63],"shown":[64],"advantages":[65],"on":[66,91,173],"robustness":[67],"compared":[68],"with":[69,126],"FreeSurfer":[70,183],"method.":[71],"However,":[72],"detailed":[74],"was":[77],"provided":[79],"by":[80],"MaCRUISE,":[81],"which":[82],"hindered":[83],"region":[85],"interests":[87],"(ROI)":[88],"based":[89,135],"surfaces.":[92,181,211],"Herein,":[93],"(MaCRUISEsp)":[98],"is":[100],"proposed":[101,198],"perform":[103,166],"upon":[107],"inner,":[109,121],"central":[110,122,180],"outer":[112,124,194,210],"surfaces":[113,125,189,205],"that":[114],"reconstructed":[116],"from":[117,159],"MaCRUISE.":[118],"MaCRUISEsp":[119,170],"parcellates":[120],"98":[127],"labels":[129],"respectively":[130],"volume":[133,157],"(VSBSP),":[138],"following":[139],"topological":[141],"correction":[142],"step.":[143],"To":[144],"validate":[145],"performance":[147],"MaCRUISEsp,":[149],"21":[150],"scan-rescan":[151],"magnetic":[152],"resonance":[153],"imaging":[154],"(MRI)":[155],"T1":[156],"pairs":[158],"Kirby21":[161],"dataset":[162],"were":[163],"used":[164],"reproducibility":[168],"analyses.":[169],"achieved":[171,184,200],"0.948":[172],"median":[174],"Dice":[175],"Similarity":[176],"Coefficient":[177],"(DSC)":[178],"Meanwhile,":[182],"0.905":[185],"DSC":[186,192,202,208],"inner":[188,204],"0.881":[191],"surfaces,":[195],"while":[196],"0.929":[201],"0.835":[207],"Qualitatively,":[212],"results":[214],"encouraging,":[216],"directly":[220],"comparable":[221],"two":[224],"approaches":[225],"use":[226],"different":[227],"definitions":[228],"labels.":[231]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}