{"id":"https://openalex.org/W2596941833","doi":"https://doi.org/10.1117/12.2256147","title":"Efficient multi-atlas registration using an intermediate template image","display_name":"Efficient multi-atlas registration using an intermediate template image","publication_year":2017,"publication_date":"2017-03-13","ids":{"openalex":"https://openalex.org/W2596941833","doi":"https://doi.org/10.1117/12.2256147","mag":"2596941833","pmid":"https://pubmed.ncbi.nlm.nih.gov/28943702"},"language":"en","primary_location":{"id":"doi:10.1117/12.2256147","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2256147","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5608448","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044628433","display_name":"Blake E. Dewey","orcid":"https://orcid.org/0000-0003-4554-5058"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Blake E. Dewey","raw_affiliation_strings":["Johns Hopkins Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Johns Hopkins Univ. (United States)","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075622613","display_name":"Aaron Carass","orcid":"https://orcid.org/0000-0003-4939-5085"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aaron Carass","raw_affiliation_strings":["Johns Hopkins Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Johns Hopkins Univ. (United States)","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017841782","display_name":"Ari M. Blitz","orcid":"https://orcid.org/0000-0002-6763-2112"},"institutions":[{"id":"https://openalex.org/I2799853436","display_name":"Johns Hopkins Medicine","ror":"https://ror.org/037zgn354","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799853436"]},{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ari M. Blitz","raw_affiliation_strings":["Johns Hopkins Univ. School of Medicine (United States)"],"affiliations":[{"raw_affiliation_string":"Johns Hopkins Univ. School of Medicine (United States)","institution_ids":["https://openalex.org/I2799853436","https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066682675","display_name":"Jerry L. Prince","orcid":"https://orcid.org/0000-0002-6553-0876"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jerry L. Prince","raw_affiliation_strings":["Johns Hopkins Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Johns Hopkins Univ. (United States)","institution_ids":["https://openalex.org/I145311948"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044628433"],"corresponding_institution_ids":["https://openalex.org/I145311948"],"apc_list":null,"apc_paid":null,"fwci":0.37,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.67830476,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"10137","issue":null,"first_page":"101371F","last_page":"101371F"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9704999923706055,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.7910666465759277},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7729754447937012},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6984385251998901},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.6593627333641052},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5553419589996338},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5225545763969421},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5085135698318481},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.44803592562675476},{"id":"https://openalex.org/keywords/template","display_name":"Template","score":0.4390644431114197},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.43638092279434204},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.43053779006004333},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.1201329231262207},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.07757273316383362}],"concepts":[{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.7910666465759277},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7729754447937012},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6984385251998901},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.6593627333641052},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5553419589996338},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5225545763969421},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5085135698318481},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.44803592562675476},{"id":"https://openalex.org/C82714645","wikidata":"https://www.wikidata.org/wiki/Q438331","display_name":"Template","level":2,"score":0.4390644431114197},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.43638092279434204},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.43053779006004333},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.1201329231262207},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.07757273316383362},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1117/12.2256147","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2256147","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmid:28943702","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28943702","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5608448","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5608448","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5608448","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5608448","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1667869507","https://openalex.org/W1957009472","https://openalex.org/W1967251218","https://openalex.org/W1970928383","https://openalex.org/W1982132176","https://openalex.org/W2004691878","https://openalex.org/W2020745232","https://openalex.org/W2060933076","https://openalex.org/W2071881327","https://openalex.org/W2113619522","https://openalex.org/W2116514219","https://openalex.org/W2117140276","https://openalex.org/W2117340355","https://openalex.org/W2135535334","https://openalex.org/W2145661921","https://openalex.org/W2148157540","https://openalex.org/W2157270343","https://openalex.org/W4256188663","https://openalex.org/W6641009400","https://openalex.org/W6681672857"],"related_works":["https://openalex.org/W2121300814","https://openalex.org/W2314146950","https://openalex.org/W2011187995","https://openalex.org/W4231091074","https://openalex.org/W2373521488","https://openalex.org/W2324878645","https://openalex.org/W2803101231","https://openalex.org/W1886613375","https://openalex.org/W4236081792","https://openalex.org/W1990901612"],"abstract_inverted_index":{"Multi-atlas":[0],"label":[1,54,85],"fusion":[2,55],"is":[3],"an":[4,15,48],"accurate":[5],"but":[6],"time-consuming":[7],"method":[8,115,131,152],"of":[9,34,45,67,104,129,134],"labeling":[10,144,157],"the":[11,31,35,43,64,113,127,147,163],"human":[12],"brain.":[13],"Using":[14],"intermediate":[16,49],"image":[17,51],"as":[18],"a":[19,58,96,108,119],"registration":[20,46,60,111],"target":[21],"can":[22,76,89],"allow":[23],"researchers":[24],"to":[25,62],"reduce":[26],"time":[27,75,88],"constraints":[28],"by":[29],"storing":[30],"deformations":[32],"required":[33],"atlas":[36],"images.":[37],"In":[38],"this":[39,130],"paper,":[40],"we":[41,125],"investigate":[42],"effect":[44],"through":[47],"template":[50],"on":[52,83,132],"multi-atlas":[53],"and":[56,87,116,161],"propose":[57],"novel":[59],"technique":[61],"counteract":[63],"negative":[65],"effects":[66],"through-template":[68,110],"registration.":[69],"We":[70,99],"show":[71],"that":[72],"overall":[73],"computation":[74],"be":[77,90],"decreased":[78],"dramatically":[79],"with":[80,136],"minimal":[81],"impact":[82],"final":[84],"accuracy":[86],"exchanged":[91],"for":[92],"improved":[93],"results":[94],"in":[95,167],"predictable":[97],"manner.":[98],"see":[100],"almost":[101],"complete":[102],"recovery":[103],"Dice":[105],"similarity":[106],"over":[107],"simple":[109],"using":[112],"corrected":[114],"still":[117],"maintain":[118],"3-4":[120],"times":[121],"speed":[122,164],"increase.":[123],"Further,":[124],"evaluate":[126],"effectiveness":[128],"brains":[133],"patients":[135],"normal-pressure":[137],"hydrocephalus,":[138],"where":[139],"abnormal":[140],"brain":[141],"shape":[142],"presents":[143],"difficulties,":[145],"specifically":[146],"ventricular":[148,156],"labels.":[149],"Our":[150],"correction":[151],"creates":[153],"substantially":[154],"better":[155],"than":[158],"traditional":[159],"methods":[160],"maintains":[162],"increase":[165],"seen":[166],"healthy":[168],"subjects.":[169]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
