{"id":"https://openalex.org/W2595225241","doi":"https://doi.org/10.1117/12.2254689","title":"Federating heterogeneous datasets to enhance data sharing and experiment reproducibility","display_name":"Federating heterogeneous datasets to enhance data sharing and experiment reproducibility","publication_year":2017,"publication_date":"2017-03-13","ids":{"openalex":"https://openalex.org/W2595225241","doi":"https://doi.org/10.1117/12.2254689","mag":"2595225241","pmid":"https://pubmed.ncbi.nlm.nih.gov/28690357"},"language":"en","primary_location":{"id":"doi:10.1117/12.2254689","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2254689","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5497850","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101841407","display_name":"Juan Carlos Prieto","orcid":"https://orcid.org/0000-0002-3778-9098"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Juan C. Prieto","raw_affiliation_strings":["Neuro Image Research and Analysis Labs. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Neuro Image Research and Analysis Labs. (United States)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003181814","display_name":"Beatriz Paniagua","orcid":"https://orcid.org/0000-0002-8437-6632"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Beatriz Paniagua","raw_affiliation_strings":["Neuro Image Research and Analysis Labs. (United States)","The Univ. of North Carolina at Chapel Hill (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Neuro Image Research and Analysis Labs. (United States)","institution_ids":[]},{"raw_affiliation_string":"The Univ. of North Carolina at Chapel Hill (United States)","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038935397","display_name":"Mar\u00edlia Yatabe","orcid":"https://orcid.org/0000-0002-8748-6714"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marilia S. Yatabe","raw_affiliation_strings":["Univ. of Michigan (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Michigan (United States)","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210111179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107922055","display_name":"A.C.O. Ruellas","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Antonio C. O. Ruellas","raw_affiliation_strings":["Univ. of Michigan (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Michigan (United States)","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210111179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087075927","display_name":"Liana Fattori","orcid":"https://orcid.org/0000-0002-0479-8457"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liana Fattori","raw_affiliation_strings":["Univ. of Michigan (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Michigan (United States)","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210111179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052786827","display_name":"Luciana Trevisan Bittencourt Muniz","orcid":"https://orcid.org/0000-0001-6832-080X"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luciana Muniz","raw_affiliation_strings":["Univ. of Michigan (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Michigan (United States)","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210111179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065838160","display_name":"Martin Styner","orcid":"https://orcid.org/0000-0002-8747-5118"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin Styner","raw_affiliation_strings":["Neuro Image Research and Analysis Labs. (United States)","The Univ. of North Carolina at Chapel Hill (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Neuro Image Research and Analysis Labs. (United States)","institution_ids":[]},{"raw_affiliation_string":"The Univ. of North Carolina at Chapel Hill (United States)","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066883487","display_name":"Luc\u00eda Cevidanes","orcid":"https://orcid.org/0000-0001-9786-2253"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lucia Cevidanes","raw_affiliation_strings":["Univ. of Michigan (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Michigan (United States)","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210111179"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.8993,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.72780526,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"10137","issue":null,"first_page":"101372J","last_page":"101372J"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9842000007629395,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12647","display_name":"Traditional Chinese Medicine Studies","score":0.9818999767303467,"subfield":{"id":"https://openalex.org/subfields/2707","display_name":"Complementary and alternative medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.780372679233551},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.6973169445991516},{"id":"https://openalex.org/keywords/replicate","display_name":"Replicate","score":0.6294578909873962},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.509479820728302},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5089919567108154},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.417550265789032},{"id":"https://openalex.org/keywords/clinical-trial","display_name":"Clinical trial","score":0.4132738709449768},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3935256898403168},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.39329537749290466},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18283548951148987},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09380388259887695},{"id":"https://openalex.org/keywords/alternative-medicine","display_name":"Alternative medicine","score":0.0878189206123352}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.780372679233551},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.6973169445991516},{"id":"https://openalex.org/C2781162219","wikidata":"https://www.wikidata.org/wiki/Q26250693","display_name":"Replicate","level":2,"score":0.6294578909873962},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.509479820728302},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5089919567108154},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.417550265789032},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.4132738709449768},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3935256898403168},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.39329537749290466},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18283548951148987},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09380388259887695},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0878189206123352},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1117/12.2254689","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2254689","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmid:28690357","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28690357","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5497850","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5497850","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5497850","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5497850","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4699999988079071,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G1830398530","display_name":null,"funder_award_id":"R21 DE025306","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"},{"id":"https://openalex.org/G476217200","display_name":null,"funder_award_id":"R01 EB021391","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G521983938","display_name":null,"funder_award_id":"R01DE 024450","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"}],"funders":[{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320337365","display_name":"National Institute of Dental and Craniofacial Research","ror":"https://ror.org/004a2wv92"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1251994293","https://openalex.org/W1897139626","https://openalex.org/W1995279104","https://openalex.org/W2033046755","https://openalex.org/W2078091518","https://openalex.org/W2278496307","https://openalex.org/W2597123537","https://openalex.org/W4298344711","https://openalex.org/W4319292979","https://openalex.org/W6628200253"],"related_works":["https://openalex.org/W4254851101","https://openalex.org/W1504819070","https://openalex.org/W2394072345","https://openalex.org/W4322757579","https://openalex.org/W1501592941","https://openalex.org/W2805259584","https://openalex.org/W2940618243","https://openalex.org/W3162307634","https://openalex.org/W4378640007","https://openalex.org/W3018845829"],"abstract_inverted_index":{"The":[0,35,95],"effects":[1],"seen":[2],"in":[3,105,164],"the":[4,14,20,23,27,56,74,90,101,106,123,160],"replicated":[5],"experiments":[6,104],"were":[7],"smaller":[8],"than":[9,62],"previously":[10],"reported.":[11],"Some":[12],"of":[13,22,38,76,89,103,128],"explanations":[15],"for":[16,48],"these":[17],"findings":[18],"include":[19],"complexity":[21],"experimental":[24],"design":[25],"and":[26,84,167],"pressure":[28],"on":[29],"researches":[30],"to":[31,54,72,86,99,117,146,159],"report":[32],"positive":[33],"findings.":[34],"International":[36],"Committee":[37],"Medical":[39],"Journal":[40],"Editors":[41],"(ICMJE)":[42],"suggests":[43],"that":[44],"every":[45],"study":[46],"considered":[47],"publication":[49],"must":[50],"submit":[51],"a":[52,69,112],"plan":[53],"share":[55],"de-identified":[57],"patient":[58],"data":[59,80,91,120,126,130,135,149],"no":[60],"later":[61],"6":[63],"months":[64],"after":[65],"publication.":[66],"There":[67],"is":[68,98,143,157],"growing":[70],"demand":[71],"enhance":[73],"management":[75],"clinical":[77,119,124,148],"data,":[78],"facilitate":[79],"sharing":[81],"across":[82],"institutions":[83],"also":[85],"keep":[87],"track":[88],"from":[92,137,150],"previous":[93],"experiments.":[94],"ultimate":[96],"goal":[97],"assure":[100],"reproducibility":[102],"future.":[107],"This":[108,155],"paper":[109],"describes":[110],"Shiny-tooth,":[111],"web":[113],"based":[114],"application":[115,142],"created":[116],"improve":[118],"acquisition":[121],"during":[122],"trial;":[125],"federation":[127],"such":[129],"as":[131,133],"well":[132],"morphological":[134],"derived":[136],"medical":[138],"images;":[139],"Currently,":[140],"this":[141],"being":[144],"used":[145],"store":[147],"an":[151],"osteoarthritis":[152],"(OA)":[153],"study.":[154],"work":[156],"submitted":[158],"SPIE":[161],"Biomedical":[162],"Applications":[163],"Molecular,":[165],"Structural,":[166],"Functional":[168],"Imaging":[169],"conference.":[170]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
