{"id":"https://openalex.org/W2597123537","doi":"https://doi.org/10.1117/12.2254673","title":"CIVILITY: cloud based interactive visualization of tractography brain connectome","display_name":"CIVILITY: cloud based interactive visualization of tractography brain connectome","publication_year":2017,"publication_date":"2017-03-13","ids":{"openalex":"https://openalex.org/W2597123537","doi":"https://doi.org/10.1117/12.2254673","mag":"2597123537","pmid":"https://pubmed.ncbi.nlm.nih.gov/29332985"},"language":"en","primary_location":{"id":"doi:10.1117/12.2254673","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2254673","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5761350","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012395801","display_name":"Dana\u00eble Puechmaille","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Dana\u00eble Puechmaille","raw_affiliation_strings":["The Univ. of North Carolina at Chapel Hill (United States)"],"affiliations":[{"raw_affiliation_string":"The Univ. of North Carolina at Chapel Hill (United States)","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065838160","display_name":"Martin Styner","orcid":"https://orcid.org/0000-0002-8747-5118"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin Styner","raw_affiliation_strings":["The Univ. of North Carolina at Chapel Hill (United States)"],"affiliations":[{"raw_affiliation_string":"The Univ. of North Carolina at Chapel Hill (United States)","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101841407","display_name":"Juan Carlos Prieto","orcid":"https://orcid.org/0000-0002-3778-9098"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Juan C. Prieto","raw_affiliation_strings":["The Univ. of North Carolina at Chapel Hill (United States)"],"affiliations":[{"raw_affiliation_string":"The Univ. of North Carolina at Chapel Hill (United States)","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5012395801"],"corresponding_institution_ids":["https://openalex.org/I114027177"],"apc_list":null,"apc_paid":null,"fwci":0.4279,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.64315993,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"10137","issue":null,"first_page":"101370R","last_page":"101370R"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7693774700164795},{"id":"https://openalex.org/keywords/connectome","display_name":"Connectome","score":0.7577707767486572},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7423285245895386},{"id":"https://openalex.org/keywords/human-connectome-project","display_name":"Human Connectome Project","score":0.4998629093170166},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.45510047674179077},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4540553390979767},{"id":"https://openalex.org/keywords/connectomics","display_name":"Connectomics","score":0.4421401023864746},{"id":"https://openalex.org/keywords/tractography","display_name":"Tractography","score":0.4351210296154022},{"id":"https://openalex.org/keywords/diffusion-mri","display_name":"Diffusion MRI","score":0.3817211389541626},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.37004220485687256},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3621746301651001},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3582730293273926},{"id":"https://openalex.org/keywords/functional-connectivity","display_name":"Functional connectivity","score":0.173088937997818},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.1550176441669464},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.09808024764060974}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7693774700164795},{"id":"https://openalex.org/C45715564","wikidata":"https://www.wikidata.org/wiki/Q1292103","display_name":"Connectome","level":3,"score":0.7577707767486572},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7423285245895386},{"id":"https://openalex.org/C97820695","wikidata":"https://www.wikidata.org/wiki/Q387749","display_name":"Human Connectome Project","level":3,"score":0.4998629093170166},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.45510047674179077},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4540553390979767},{"id":"https://openalex.org/C2779097318","wikidata":"https://www.wikidata.org/wiki/Q2993446","display_name":"Connectomics","level":4,"score":0.4421401023864746},{"id":"https://openalex.org/C84787856","wikidata":"https://www.wikidata.org/wiki/Q3076659","display_name":"Tractography","level":4,"score":0.4351210296154022},{"id":"https://openalex.org/C149550507","wikidata":"https://www.wikidata.org/wiki/Q899360","display_name":"Diffusion MRI","level":3,"score":0.3817211389541626},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37004220485687256},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3621746301651001},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3582730293273926},{"id":"https://openalex.org/C3018011982","wikidata":"https://www.wikidata.org/wiki/Q7316120","display_name":"Functional connectivity","level":2,"score":0.173088937997818},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.1550176441669464},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.09808024764060974},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1117/12.2254673","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2254673","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmid:29332985","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29332985","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5761350","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5761350","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5761350","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5761350","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc SPIE Int Soc Opt Eng","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W212537071","https://openalex.org/W2000133863","https://openalex.org/W2005821483","https://openalex.org/W2142059961","https://openalex.org/W2171775073","https://openalex.org/W6651829596"],"related_works":["https://openalex.org/W1480657811","https://openalex.org/W2400850456","https://openalex.org/W4312379891","https://openalex.org/W2944765019","https://openalex.org/W2741941708","https://openalex.org/W2014292780","https://openalex.org/W3200763141","https://openalex.org/W2114571052","https://openalex.org/W2058085357","https://openalex.org/W3204332639"],"abstract_inverted_index":{"Cloud":[0],"based":[1],"Interactive":[2],"Visualization":[3],"of":[4,14,106,111,155],"Tractography":[5],"Brain":[6,112],"Connectome":[7],"(CIVILITY)":[8],"is":[9,32,48,53,85,99,127,138,158],"an":[10],"interactive":[11],"visualization":[12,109,125],"tool":[13,110],"brain":[15,51,97],"connectome":[16,52],"in":[17,80,90,145,160],"the":[18,29,38,42,50,74,81,107,124,133,141],"cloud.":[19],"This":[20,83,114,136],"application":[21,35,157],"submits":[22],"tasks":[23,40,94],"to":[24,68,102,123,140],"remote":[25],"computing":[26],"grids":[27],"were":[28],"CIVILITY-tractography":[30],"pipeline":[31,61],"deployed.":[33],"The":[34,59,152],"will":[36],"list":[37],"running":[39],"for":[41,132],"user":[43],"and":[44,66,101,148],"once":[45],"a":[46,70,104,129],"task":[47],"completed":[49],"visualized":[54],"using":[55],"Hierarchical":[56],"Edge":[57],"Bundling.":[58],"analysis":[60],"uses":[62],"FSL":[63],"tools":[64],"(bedpostx":[65],"probtrackx2)":[67],"generate":[69],"triangular":[71],"matrix":[72],"indicating":[73],"connectivity":[75,98],"strength":[76],"between":[77],"different":[78],"regions":[79],"brain.":[82],"work":[84,115,137],"motivated":[86],"by":[87],"medical":[88],"applications":[89],"which":[91],"expensive":[92],"computational":[93],"such":[95],"as":[96],"needed":[100],"provide":[103],"state":[105],"art":[108],"Connectome.":[113],"does":[116],"not":[117],"contribute":[118],"any":[119],"novelty":[120],"with":[121],"respect":[122],"methodology,":[126],"rather":[128],"new":[130],"resource":[131],"neuroimaging":[134],"community.":[135],"submitted":[139],"SPIE":[142],"Biomedical":[143],"Applications":[144],"Molecular,":[146],"Structural,":[147],"Functional":[149],"Imaging":[150],"conference.":[151],"source":[153],"code":[154],"this":[156],"available":[159],"NITRC.":[161]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
