{"id":"https://openalex.org/W2316656651","doi":"https://doi.org/10.1117/12.2216981","title":"Microscopic validation of whole mouse micro-metastatic tumor imaging agents using cryo-imaging and sliding organ image registration","display_name":"Microscopic validation of whole mouse micro-metastatic tumor imaging agents using cryo-imaging and sliding organ image registration","publication_year":2016,"publication_date":"2016-03-29","ids":{"openalex":"https://openalex.org/W2316656651","doi":"https://doi.org/10.1117/12.2216981","mag":"2316656651","pmid":"https://pubmed.ncbi.nlm.nih.gov/29382962"},"language":"en","primary_location":{"id":"doi:10.1117/12.2216981","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2216981","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5064649257","display_name":"Yiqiao Liu","orcid":"https://orcid.org/0000-0003-1071-5475"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yiqiao Liu","raw_affiliation_strings":["Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","Case Western Reserve Univ. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Case Western Reserve Univ. (United States)","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085149886","display_name":"Bo Zhou","orcid":"https://orcid.org/0000-0002-2906-0897"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bo Zhou","raw_affiliation_strings":["Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","Case Western Reserve Univ. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Case Western Reserve Univ. (United States)","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003306597","display_name":"Mohammed Qutaish","orcid":"https://orcid.org/0000-0002-6707-2872"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mohammed Qutaish","raw_affiliation_strings":["Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","Case Western Reserve Univ. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Case Western Reserve Univ. (United States)","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059314323","display_name":"David L. Wilson","orcid":"https://orcid.org/0000-0001-9763-1463"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David L. Wilson","raw_affiliation_strings":["Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","Department of Radiology, Case Western Reserve University, Cleveland, OH, 44106, USA","Case Western Reserve Univ. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Department of Radiology, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Case Western Reserve Univ. (United States)","institution_ids":["https://openalex.org/I58956616"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5064649257"],"corresponding_institution_ids":["https://openalex.org/I58956616"],"apc_list":null,"apc_paid":null,"fwci":0.5824,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.70901941,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"9788","issue":null,"first_page":"97882L","last_page":"97882L"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.8191735744476318},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6859859824180603},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.6440268158912659},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.544211745262146},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5341683030128479},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.3599587082862854},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18470904231071472}],"concepts":[{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.8191735744476318},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6859859824180603},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.6440268158912659},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.544211745262146},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5341683030128479},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.3599587082862854},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18470904231071472},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1117/12.2216981","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2216981","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmid:29382962","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29382962","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of SPIE--the International Society for Optical Engineering","raw_type":null},{"id":"pmh:oai:europepmc.org:4691783","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5787390","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W31906959","https://openalex.org/W1202879735","https://openalex.org/W2007979740","https://openalex.org/W2023474548","https://openalex.org/W2037821483","https://openalex.org/W2037851175","https://openalex.org/W2039664617","https://openalex.org/W2065548150","https://openalex.org/W2078237160","https://openalex.org/W2107956652","https://openalex.org/W2113576511","https://openalex.org/W2163367650","https://openalex.org/W4236881702","https://openalex.org/W6601278490","https://openalex.org/W6627980844","https://openalex.org/W6652425729","https://openalex.org/W6659958362"],"related_works":["https://openalex.org/W2755342338","https://openalex.org/W2058170566","https://openalex.org/W2036807459","https://openalex.org/W2775347418","https://openalex.org/W1969923398","https://openalex.org/W2772917594","https://openalex.org/W2166024367","https://openalex.org/W3116076068","https://openalex.org/W2229312674","https://openalex.org/W2079911747"],"abstract_inverted_index":{"We":[0,23],"created":[1,95],"a":[2,105,142,159,170,223],"metastasis":[3],"imaging,":[4],"analysis":[5],"platform":[6],"consisting":[7],"of":[8,38,54,164,169,176],"software":[9],"and":[10,34,47,109,123,127,166,204],"multi-spectral":[11],"cryo-imaging":[12,30],"system":[13],"suitable":[14],"for":[15,151],"evaluating":[16],"emerging":[17],"imaging":[18,53],"agents":[19],"targeting":[20],"micro-metastatic":[21],"tumor.":[22],"analyzed":[24],"CREKA-Gd":[25],"in":[26,113,158,179,209],"MRI,":[27],"followed":[28],"by":[29],"which":[31,81],"repeatedly":[32],"sectioned":[33],"tiled":[35],"microscope":[36],"images":[37],"the":[39,55,68,118,121,138,184],"tissue":[40],"block":[41],"face,":[42],"providing":[43],"anatomical":[44],"bright":[45,70],"field":[46,71],"molecular":[48],"fluorescence,":[49],"enabling":[50],"3D":[51,89],"microscopic":[52],"entire":[56],"mouse":[57],"with":[58,218],"single":[59],"metastatic":[60],"cell":[61],"sensitivity.":[62],"To":[63],"register":[64],"MRI":[65],"volumes":[66,125],"to":[67,144,212],"cryo":[69],"reference,":[72],"we":[73,94,101,116],"used":[74],"our":[75],"<i>standard":[76,152],"</i>mutual":[77],"information,":[78],"non-rigid":[79,88],"registration":[80,147],"proceeded:":[82],"preprocess":[83],"&rarr;":[84,86],"affine":[85],"B-spline":[87],"registration.":[90],"In":[91],"this":[92],"report,":[93],"two":[96],"modified":[97],"approaches:":[98],"mask":[99],"where":[100,186],"registered":[102,120],"locally":[103],"over":[104],"smaller":[106],"rectangular":[107],"solid,":[108],"<i>sliding":[110,114,131,195,219],"organ</i>.":[111],"Briefly,":[112],"organ</i>,":[115],"segmented":[117],"organ,":[119],"organ":[122,132,196,220],"body":[124],"separately":[126],"combined":[128],"results.":[129],"Though":[130],"</i>required":[133],"manual":[134],"annotation,":[135],"it":[136],"provided":[137],"best":[139],"result":[140],"as":[141],"standard":[143],"measure":[145],"other":[146],"methods.":[148],"Regularization":[149],"parameters":[150],"</i>and":[153,194,221],"<i>mask":[154,193,210],"</i>methods":[155],"were":[156,188,200],"optimized":[157],"grid":[160],"search.":[161],"Evaluations":[162],"consisted":[163],"DICE,":[165],"visual":[167],"scoring":[168],"checkerboard":[171],"display.":[172],"<i>Standard":[173],"</i>had":[174],"accuracy":[175],"2":[177,202],"voxels":[178,190],"all":[180],"regions":[181],"except":[182],"near":[183],"kidney,":[185],"there":[187],"5":[189],"sliding.":[191],"After":[192],"</i>correction,":[197],"kidneys":[198],"sliding":[199],"within":[201],"voxels,":[203],"Dice":[205],"overlap":[206],"increased":[207],"4%&ndash;10%":[208],"</i>compared":[211],"<i>standard</i>.":[213],"<i>Mask":[214],"</i>generated":[215],"comparable":[216],"results":[217],"allowed":[222],"semi-automatic":[224],"process.":[225]},"counts_by_year":[{"year":2018,"cited_by_count":2}],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-10-10T00:00:00"}
