{"id":"https://openalex.org/W4231628568","doi":"https://doi.org/10.1117/12.2216753","title":"Measuring glomerular number from kidney MRI images","display_name":"Measuring glomerular number from kidney MRI images","publication_year":2016,"publication_date":"2016-03-21","ids":{"openalex":"https://openalex.org/W4231628568","doi":"https://doi.org/10.1117/12.2216753"},"language":"en","primary_location":{"id":"doi:10.1117/12.2216753","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2216753","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.osti.gov/biblio/1342066","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046632395","display_name":"Jayaraman J. Thiagarajan","orcid":"https://orcid.org/0000-0002-8517-5816"},"institutions":[{"id":"https://openalex.org/I1282311441","display_name":"Lawrence Livermore National Laboratory","ror":"https://ror.org/041nk4h53","country_code":"US","type":"facility","lineage":["https://openalex.org/I1282311441","https://openalex.org/I1330989302","https://openalex.org/I198811213","https://openalex.org/I4210138311"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jayaraman J. Thiagarajan","raw_affiliation_strings":["Lawrence Livermore National Lab. (United States)"],"affiliations":[{"raw_affiliation_string":"Lawrence Livermore National Lab. (United States)","institution_ids":["https://openalex.org/I1282311441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081874896","display_name":"Karthikeyan Natesan Ramamurthy","orcid":"https://orcid.org/0000-0002-6021-5930"},"institutions":[{"id":"https://openalex.org/I4210114115","display_name":"IBM Research - Thomas J. Watson Research Center","ror":"https://ror.org/0265w5591","country_code":"US","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Karthikeyan Natesan Ramamurthy","raw_affiliation_strings":["IBM Thomas J. Watson Research Ctr. (United States)"],"affiliations":[{"raw_affiliation_string":"IBM Thomas J. Watson Research Ctr. (United States)","institution_ids":["https://openalex.org/I4210114115"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083320393","display_name":"Berkay Kanberoglu","orcid":"https://orcid.org/0000-0001-9008-2887"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Berkay Kanberoglu","raw_affiliation_strings":["Arizona State Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Arizona State Univ. (United States)","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019040738","display_name":"David Frakes","orcid":"https://orcid.org/0000-0002-4113-4940"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Frakes","raw_affiliation_strings":["Arizona State Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Arizona State Univ. (United States)","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002902508","display_name":"Kevin M. Bennett","orcid":"https://orcid.org/0000-0003-1706-4660"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin Bennett","raw_affiliation_strings":["Arizona State Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Arizona State Univ. (United States)","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074371899","display_name":"Andreas Spanias","orcid":"https://orcid.org/0000-0003-0306-9348"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andreas Spanias","raw_affiliation_strings":["Arizona State Univ. (United States)"],"affiliations":[{"raw_affiliation_string":"Arizona State Univ. (United States)","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5046632395"],"corresponding_institution_ids":["https://openalex.org/I1282311441"],"apc_list":null,"apc_paid":null,"fwci":0.1689,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.636446,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"9784","issue":null,"first_page":"978412","last_page":"978412"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9836999773979187,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9836999773979187,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11885","display_name":"MRI in cancer diagnosis","score":0.9646999835968018,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11174","display_name":"Pediatric Urology and Nephrology Studies","score":0.9593999981880188,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6438916921615601},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5689007043838501},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5534041523933411},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5015246868133545},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.47473272681236267},{"id":"https://openalex.org/keywords/subspace-topology","display_name":"Subspace topology","score":0.4590510427951813},{"id":"https://openalex.org/keywords/kidney-glomerulus","display_name":"Kidney Glomerulus","score":0.4587249457836151},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.43228596448898315},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.41457223892211914},{"id":"https://openalex.org/keywords/kidney","display_name":"Kidney","score":0.3693215250968933},{"id":"https://openalex.org/keywords/glomerulonephritis","display_name":"Glomerulonephritis","score":0.2103879153728485},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.1907804310321808},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18968579173088074},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.09540700912475586}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6438916921615601},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5689007043838501},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5534041523933411},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5015246868133545},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.47473272681236267},{"id":"https://openalex.org/C32834561","wikidata":"https://www.wikidata.org/wiki/Q660730","display_name":"Subspace topology","level":2,"score":0.4590510427951813},{"id":"https://openalex.org/C2910856063","wikidata":"https://www.wikidata.org/wiki/Q909882","display_name":"Kidney Glomerulus","level":4,"score":0.4587249457836151},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.43228596448898315},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.41457223892211914},{"id":"https://openalex.org/C2780091579","wikidata":"https://www.wikidata.org/wiki/Q9377","display_name":"Kidney","level":2,"score":0.3693215250968933},{"id":"https://openalex.org/C2780368995","wikidata":"https://www.wikidata.org/wiki/Q605006","display_name":"Glomerulonephritis","level":3,"score":0.2103879153728485},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.1907804310321808},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18968579173088074},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.09540700912475586}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1117/12.2216753","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2216753","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmh:oai:osti.gov:1342066","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1342066","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:osti.gov:1342066","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1342066","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"sustainable_development_goals":[{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1904464160","https://openalex.org/W1965833296","https://openalex.org/W1992405901","https://openalex.org/W2017990018","https://openalex.org/W2053495650","https://openalex.org/W2069463854","https://openalex.org/W2081523875","https://openalex.org/W2098089028","https://openalex.org/W2145983039","https://openalex.org/W2155916750","https://openalex.org/W2170858770","https://openalex.org/W3148981562","https://openalex.org/W4205231485","https://openalex.org/W4211179122","https://openalex.org/W6648617349","https://openalex.org/W6681368121","https://openalex.org/W6682910470","https://openalex.org/W6683138904","https://openalex.org/W6685372642"],"related_works":["https://openalex.org/W2965546495","https://openalex.org/W4389116644","https://openalex.org/W2153315159","https://openalex.org/W3103844505","https://openalex.org/W259157601","https://openalex.org/W4205463238","https://openalex.org/W2761785940","https://openalex.org/W1482209366","https://openalex.org/W2110523656","https://openalex.org/W2393351060"],"abstract_inverted_index":{"Measuring":[0],"the":[1,5,30,53,70,85,107,139,141,145,152,160,169,205],"glomerular":[2,67,121,146],"number":[3,86],"in":[4,16,69,143],"entire,":[6],"intact":[7],"kidney":[8,32,91],"using":[9,168],"non-destructive":[10],"techniques":[11],"is":[12,112,176],"of":[13,29,55,87,177,201],"immense":[14],"importance":[15],"studying":[17],"several":[18],"renal":[19],"and":[20,80,101,120,122,135,188,219],"systemic":[21],"diseases.":[22],"Commonly":[23],"used":[24,63],"approaches":[25,214],"either":[26],"require":[27],"destruction":[28],"entire":[31],"or":[33],"perform":[34],"extrapolation":[35],"from":[36,39,89,151,198],"measurements":[37],"obtained":[38,197],"a":[40,56,77,98,102,115],"few":[41,116],"isolated":[42],"sections.":[43],"A":[44],"recent":[45],"magnetic":[46],"resonance":[47],"imaging":[48],"(MRI)":[49],"method,":[50],"based":[51],"on":[52,114],"injection":[54],"contrast":[57],"agent":[58],"(cationic":[59],"ferritin),":[60],"has":[61,97],"been":[62],"to":[64,132,212],"effectively":[65],"identify":[66],"regions":[68,147],"kidney.":[71],"In":[72,106],"this":[73],"work,":[74],"we":[75],"propose":[76],"robust,":[78],"accurate,":[79],"low-complexity":[81,103,208],"method":[82],"for":[83],"estimating":[84],"glomeruli":[88],"such":[90,215],"MRI":[92,195],"images.":[93],"The":[94,173],"proposed":[95,206],"technique":[96],"training":[99,108,118],"phase":[100,175],"testing":[104,174],"phase.":[105],"phase,":[109],"organ":[110],"segmentation":[111],"performed":[113],"expert-marked":[117],"images,":[119,159],"non-glomerular":[123],"image":[124,161],"patches":[125,162],"are":[126,154,166],"extracted.":[127],"Using":[128],"non-local":[129],"sparse":[130],"coding":[131],"compute":[133],"similarity":[134],"dissimilarity":[136],"graphs":[137],"between":[138],"patches,":[140],"subspace":[142,171],"which":[144],"can":[148],"be":[149],"discriminated":[150],"rest":[153],"estimated.":[155],"For":[156],"novel":[157],"test":[158],"extracted":[163],"after":[164],"pre-processing":[165],"embedded":[167],"discriminative":[170],"projections.":[172],"low":[178],"computational":[179],"complexity":[180],"since":[181],"it":[182],"involves":[183],"only":[184],"matrix":[185],"multiplications,":[186],"clustering,":[187],"simple":[189],"morphological":[190],"operations.":[191],"Preliminary":[192],"results":[193],"with":[194],"data":[196],"five":[199],"kidneys":[200],"rats":[202],"show":[203],"that":[204],"non-invasive,":[207],"approach":[209],"performs":[210],"comparably":[211],"conventional":[213],"as":[216],"acid":[217],"maceration":[218],"stereology.":[220]},"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
