{"id":"https://openalex.org/W2062169524","doi":"https://doi.org/10.1117/12.2082243","title":"Uncertainty in the assessment of immunohistochemical staining with optical and digital microscopy: lessons from a reader study","display_name":"Uncertainty in the assessment of immunohistochemical staining with optical and digital microscopy: lessons from a reader study","publication_year":2015,"publication_date":"2015-03-19","ids":{"openalex":"https://openalex.org/W2062169524","doi":"https://doi.org/10.1117/12.2082243","mag":"2062169524"},"language":"en","primary_location":{"id":"doi:10.1117/12.2082243","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2082243","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039348485","display_name":"Marios A. Gavrielides","orcid":null},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Marios A. Gavrielides","raw_affiliation_strings":["U.S. Food and Drug Administration (United States)","U.S. Food and Drug Administration  (United States)"],"affiliations":[{"raw_affiliation_string":"U.S. Food and Drug Administration (United States)","institution_ids":["https://openalex.org/I1320320070"]},{"raw_affiliation_string":"U.S. Food and Drug Administration  (United States)","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067893440","display_name":"Brandon D. Gallas","orcid":"https://orcid.org/0000-0001-7332-1620"},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandon D. Gallas","raw_affiliation_strings":["U.S. Food and Drug Administration (United States)","U.S. Food and Drug Administration  (United States)"],"affiliations":[{"raw_affiliation_string":"U.S. Food and Drug Administration (United States)","institution_ids":["https://openalex.org/I1320320070"]},{"raw_affiliation_string":"U.S. Food and Drug Administration  (United States)","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011055578","display_name":"Stephen M. Hewitt","orcid":"https://orcid.org/0000-0001-8283-1788"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stephen M. Hewitt","raw_affiliation_strings":["National Cancer Institute (United States)"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute (United States)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5039348485"],"corresponding_institution_ids":["https://openalex.org/I1320320070"],"apc_list":null,"apc_paid":null,"fwci":0.8629,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.82224112,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"9420","issue":null,"first_page":"94200V","last_page":"94200V"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10755","display_name":"HER2/EGFR in Cancer Research","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.5697619318962097},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5609813332557678},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.5481009483337402},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.5051670670509338},{"id":"https://openalex.org/keywords/confidence-interval","display_name":"Confidence interval","score":0.41487568616867065},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3690612316131592},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.33813026547431946},{"id":"https://openalex.org/keywords/nuclear-medicine","display_name":"Nuclear medicine","score":0.32812249660491943},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.3228740990161896},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.30393069982528687},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3023279309272766}],"concepts":[{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.5697619318962097},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5609813332557678},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.5481009483337402},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.5051670670509338},{"id":"https://openalex.org/C44249647","wikidata":"https://www.wikidata.org/wiki/Q208498","display_name":"Confidence interval","level":2,"score":0.41487568616867065},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3690612316131592},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.33813026547431946},{"id":"https://openalex.org/C2989005","wikidata":"https://www.wikidata.org/wiki/Q214963","display_name":"Nuclear medicine","level":1,"score":0.32812249660491943},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.3228740990161896},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.30393069982528687},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3023279309272766},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2082243","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2082243","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1480966043","https://openalex.org/W1555772928","https://openalex.org/W1603840175","https://openalex.org/W1904102334","https://openalex.org/W1967414409","https://openalex.org/W1974044718","https://openalex.org/W1983346554","https://openalex.org/W2008365559","https://openalex.org/W2009716730","https://openalex.org/W2049887610","https://openalex.org/W2070220355","https://openalex.org/W2074330269","https://openalex.org/W2078437730","https://openalex.org/W2081166648","https://openalex.org/W2105967608","https://openalex.org/W2130900820","https://openalex.org/W2136018618","https://openalex.org/W2143049018","https://openalex.org/W2150134401","https://openalex.org/W2154536753","https://openalex.org/W2166581609","https://openalex.org/W2166764706","https://openalex.org/W2168460514","https://openalex.org/W2330471374","https://openalex.org/W4207058970","https://openalex.org/W4229759000","https://openalex.org/W4229828942","https://openalex.org/W4246434278","https://openalex.org/W4249011061","https://openalex.org/W6628831344","https://openalex.org/W6684829588"],"related_works":["https://openalex.org/W1975767702","https://openalex.org/W3128797991","https://openalex.org/W4212803330","https://openalex.org/W4390879800","https://openalex.org/W4283827404","https://openalex.org/W4289646162","https://openalex.org/W2470965540","https://openalex.org/W4294926720","https://openalex.org/W3156062623","https://openalex.org/W2346924903"],"abstract_inverted_index":{"We":[0],"recently":[1],"completed":[2],"a":[3,61],"reader":[4],"study":[5,231],"to":[6,80,86,139,215,226,233],"compare":[7],"optical":[8,54],"and":[9,34,38,53,73,98,108,225],"digital":[10,52],"pathology":[11],"(DP)":[12],"for":[13,116,131,166,181,194,208,220,228],"the":[14,65,74,94,117,127,132,145,151,160,182,187],"assessment":[15],"of":[16,83,129,142,153,163,184,189,218],"two":[17],"tissue-based":[18],"biomarkers":[19],"with":[20,32,36,43,46,121,178],"immunohistochemistry.":[21],"Eight":[22],"pathologists":[23],"reviewed":[24],"50":[25],"breast":[26],"cancer":[27],"whole":[28,118],"slides":[29,165,193],"(25":[30],"stained":[31,42],"HER2":[33],"25":[35,164],"Ki-67)":[37],"2":[39],"TMAs":[40],"(1":[41],"HER2,":[44],"1":[45],"Ki-67,":[47],"97":[48],"cores":[49],"each),":[50],"using":[51,64,93],"microscopy.":[55],"All":[56],"reviews":[57],"took":[58],"place":[59],"in":[60,78,126,150,176,203,223,230],"single":[62],"office,":[63],"same":[66,68,75],"microscope,":[67],"computer/color":[69],"calibrated":[70],"monitor":[71],"combination,":[72],"ambient":[76],"light,":[77],"order":[79,128,152],"eliminate":[81],"sources":[82,141,217],"variability":[84],"due":[85],"these":[87],"parameters.":[88],"Agreement":[89],"analysis":[90],"was":[91,114,169,201],"performed":[92],"Kendall\u2019s":[95,133],"tau-b":[96,134],"metric":[97],"percent":[99],"correct":[100],"agreement.":[101,110],"Results":[102],"showed":[103],"relatively":[104],"high":[105],"overall":[106],"inter-observer":[107],"inter-modality":[109],"However,":[111],"significant":[112],"uncertainty":[113,200,219],"observed":[115,202],"slide":[119],"evaluation":[120],"95%":[122],"confidence":[123],"intervals":[124],"(CI)":[125],"0.30":[130],"metric,":[135],"despite":[136,206],"taking":[137],"care":[138],"reduce":[140],"uncertainty.":[143],"For":[144],"better-sampled":[146],"TMAs,":[147],"CIs":[148],"were":[149],"0.15.":[154],"It":[155],"can":[156],"be":[157],"deduced":[158],"that":[159],"sample":[161],"size":[162],"each":[167],"biomarker":[168],"not":[170],"adequate":[171],"even":[172],"though":[173],"it":[174,229],"is":[175,213],"line":[177],"recent":[179],"guidelines":[180],"validation":[183],"DP":[185],"from":[186],"College":[188],"American":[190],"Pathologists":[191],"(20":[192],"immunohistochemistry":[195],"without":[196],"specifying":[197],"task).":[198],"Significant":[199],"our":[204],"study,":[205],"controlling":[207],"several":[209],"variables.":[210],"Further":[211],"work":[212],"needed":[214],"identify":[216],"observer":[221],"tasks":[222],"DP,":[224],"account":[227],"designs":[232],"assess":[234],"DP.":[235]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
