{"id":"https://openalex.org/W2024082011","doi":"https://doi.org/10.1117/12.2081835","title":"Anisotropic tubular filtering for automatic detection of acid-fast bacilli in Ziehl-Neelsen stained sputum smear samples","display_name":"Anisotropic tubular filtering for automatic detection of acid-fast bacilli in Ziehl-Neelsen stained sputum smear samples","publication_year":2015,"publication_date":"2015-03-19","ids":{"openalex":"https://openalex.org/W2024082011","doi":"https://doi.org/10.1117/12.2081835","mag":"2024082011"},"language":"en","primary_location":{"id":"doi:10.1117/12.2081835","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2081835","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041645982","display_name":"Shan E Ahmed Raza","orcid":"https://orcid.org/0000-0002-1097-1738"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Shan-e-Ahmed Raza","raw_affiliation_strings":["The Univ. of Warwick (United Kingdom)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051607193","display_name":"M. Q. Marjan","orcid":null},"institutions":[{"id":"https://openalex.org/I134276161","display_name":"Pakistan Institute of Engineering and Applied Sciences","ror":"https://ror.org/04d4mbk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I134276161"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"M. Q. Marjan","raw_affiliation_strings":["Pakistan Institute of Engineering & Applied Sciences (Pakistan)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pakistan Institute of Engineering & Applied Sciences (Pakistan)","institution_ids":["https://openalex.org/I134276161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101970885","display_name":"Muhammad Arif","orcid":"https://orcid.org/0000-0003-0513-9872"},"institutions":[{"id":"https://openalex.org/I134276161","display_name":"Pakistan Institute of Engineering and Applied Sciences","ror":"https://ror.org/04d4mbk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I134276161"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Muhammad Arif","raw_affiliation_strings":["Pakistan Institute of Engineering & Applied Sciences (Pakistan)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pakistan Institute of Engineering & Applied Sciences (Pakistan)","institution_ids":["https://openalex.org/I134276161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073213098","display_name":"Farhana Butt","orcid":null},"institutions":[{"id":"https://openalex.org/I2801629893","display_name":"West Middlesex University Hospital","ror":"https://ror.org/05vgg2c14","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2799869770","https://openalex.org/I2801629893"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Farhana Butt","raw_affiliation_strings":["West Middlesex Univ. Hospital (United Kingdom)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"West Middlesex Univ. Hospital (United Kingdom)","institution_ids":["https://openalex.org/I2801629893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058121203","display_name":"Faisal Sultan","orcid":"https://orcid.org/0000-0002-6472-5698"},"institutions":[{"id":"https://openalex.org/I4210128772","display_name":"Shaukat Khanum Memorial Cancer Hospital and Research Center","ror":"https://ror.org/03btpnr35","country_code":"PK","type":"healthcare","lineage":["https://openalex.org/I4210128772"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Faisal Sultan","raw_affiliation_strings":["Shaukat Khanum Memorial Cancer Hospital & Research Ctr. (Pakistan)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shaukat Khanum Memorial Cancer Hospital & Research Ctr. (Pakistan)","institution_ids":["https://openalex.org/I4210128772"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069179055","display_name":"Nasir Rajpoot","orcid":"https://orcid.org/0000-0002-4706-1308"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]},{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["GB","QA"],"is_corresponding":false,"raw_author_name":"Nasir M. Rajpoot","raw_affiliation_strings":["Qatar Univ. (Qatar)","The Univ. of Warwick (United Kingdom)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Qatar Univ. (Qatar)","institution_ids":["https://openalex.org/I60342839"]},{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.08540665,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"9420","issue":null,"first_page":"942005","last_page":"942005"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ziehl\u2013neelsen-stain","display_name":"Ziehl\u2013Neelsen stain","score":0.7478196024894714},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6204354166984558},{"id":"https://openalex.org/keywords/sputum","display_name":"Sputum","score":0.5163965821266174},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5159578919410706},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4255276024341583},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4237006604671478},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.3473018705844879},{"id":"https://openalex.org/keywords/acid-fast","display_name":"Acid-fast","score":0.26534563302993774},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.26021283864974976},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.2536756992340088}],"concepts":[{"id":"https://openalex.org/C189962949","wikidata":"https://www.wikidata.org/wiki/Q198921","display_name":"Ziehl\u2013Neelsen stain","level":5,"score":0.7478196024894714},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6204354166984558},{"id":"https://openalex.org/C2776301714","wikidata":"https://www.wikidata.org/wiki/Q259346","display_name":"Sputum","level":3,"score":0.5163965821266174},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5159578919410706},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4255276024341583},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4237006604671478},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.3473018705844879},{"id":"https://openalex.org/C101077360","wikidata":"https://www.wikidata.org/wiki/Q3278217","display_name":"Acid-fast","level":4,"score":0.26534563302993774},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.26021283864974976},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.2536756992340088}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2081835","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2081835","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1570535423","https://openalex.org/W1576605470","https://openalex.org/W1598458824","https://openalex.org/W1760619050","https://openalex.org/W2028336474","https://openalex.org/W2115158471","https://openalex.org/W2129013784","https://openalex.org/W2141033969","https://openalex.org/W2164969270","https://openalex.org/W2417927565","https://openalex.org/W3009705041","https://openalex.org/W4235055412","https://openalex.org/W4254295537","https://openalex.org/W6634298451","https://openalex.org/W6634384759","https://openalex.org/W6637973514"],"related_works":["https://openalex.org/W2398856609","https://openalex.org/W2547379516","https://openalex.org/W2925048314","https://openalex.org/W2360743014","https://openalex.org/W2886264956","https://openalex.org/W195240963","https://openalex.org/W3031627308","https://openalex.org/W2556060364","https://openalex.org/W137727250","https://openalex.org/W177783419"],"abstract_inverted_index":{"One":[0],"of":[1,19,64,69,82,89,111,157],"the":[2,15,83,87,102,115,155,158,170,182],"main":[3],"factors":[4],"for":[5,61,189],"high":[6,28],"workload":[7],"in":[8,11,47,66,114,176],"pulmonary":[9],"pathology":[10],"developing":[12],"countries":[13],"is":[14,34,86,120,148],"relatively":[16],"large":[17],"proportion":[18],"tuberculosis":[20],"(TB)":[21],"cases":[22],"which":[23,39,100],"can":[24],"be":[25],"detected":[26],"with":[27,162,185],"throughput":[29],"using":[30,93,123,137],"automated":[31],"approaches.":[32],"TB":[33],"caused":[35],"by":[36,167],"<i>Mycobacterium":[37],"tuberculosis</i>,":[38],"appears":[40],"as":[41],"thin,":[42],"rod-shaped":[43],"acid-fast":[44],"bacillus":[45],"(AFB)":[46],"Ziehl-Neelsen":[48],"(ZN)":[49],"stained":[50,71],"sputum":[51,72],"smear":[52,73],"samples.":[53],"In":[54],"this":[55],"paper,":[56],"we":[57],"present":[58,113],"an":[59],"algorithm":[60,85],"automatic":[62],"detection":[63],"AFB":[65,149],"digitized":[67],"images":[68],"ZN":[70],"samples":[74],"under":[75],"a":[76,94,132,145],"light":[77],"microscope.":[78],"A":[79],"key":[80],"component":[81],"proposed":[84,159,171],"enhancement":[88],"raw":[90],"input":[91],"image":[92,119,147,172,190],"novel":[95],"anisotropic":[96,109],"tubular":[97],"filter":[98],"(ATF)":[99],"suppresses":[101],"background":[103],"noise":[104],"while":[105],"simultaneously":[106],"enhancing":[107],"strong":[108],"features":[110,125,139],"AFBs":[112,128,142],"image.":[116],"The":[117],"resulting":[118],"then":[121],"segmented":[122],"color":[124],"and":[126,179],"candidate":[127,141],"are":[129],"identified.":[130],"Finally,":[131],"support":[133],"vector":[134],"machine":[135],"classifier":[136],"morphological":[138],"from":[140],"decides":[143],"whether":[144],"given":[146],"positive":[150],"or":[151],"not.":[152],"We":[153],"demonstrate":[154],"effectiveness":[156],"ATF":[160],"method":[161],"two":[163],"different":[164],"feature":[165],"sets":[166],"showing":[168],"that":[169],"analysis":[173],"pipeline":[174,184],"results":[175],"higher":[177],"accuracy":[178],"F1-score":[180],"than":[181],"same":[183],"standard":[186],"median":[187],"filtering":[188],"enhancement.":[191]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
