{"id":"https://openalex.org/W1749652928","doi":"https://doi.org/10.1117/12.2081204","title":"Locating seed points for automatic multi-organ segmentation using non-rigid registration and organ annotations","display_name":"Locating seed points for automatic multi-organ segmentation using non-rigid registration and organ annotations","publication_year":2015,"publication_date":"2015-03-20","ids":{"openalex":"https://openalex.org/W1749652928","doi":"https://doi.org/10.1117/12.2081204","mag":"1749652928"},"language":"en","primary_location":{"id":"doi:10.1117/12.2081204","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2081204","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arodes.hes-so.ch/record/677/files/joyseeree_muller_locatingseed_2015.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010508001","display_name":"Ranveer Joyseeree","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I173439891","display_name":"HES-SO University of Applied Sciences and Arts Western Switzerland","ror":"https://ror.org/01xkakk17","country_code":"CH","type":"education","lineage":["https://openalex.org/I173439891"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Ranveer R. Joyseeree","raw_affiliation_strings":["ETH Z\u00fcrich (Switzerland)","Univ. of Applied Sciences Western Switzerland (Switzerland)"],"affiliations":[{"raw_affiliation_string":"ETH Z\u00fcrich (Switzerland)","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Univ. of Applied Sciences Western Switzerland (Switzerland)","institution_ids":["https://openalex.org/I173439891"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061961859","display_name":"Henning M\u00fcller","orcid":"https://orcid.org/0000-0001-6800-9878"},"institutions":[{"id":"https://openalex.org/I173439891","display_name":"HES-SO University of Applied Sciences and Arts Western Switzerland","ror":"https://ror.org/01xkakk17","country_code":"CH","type":"education","lineage":["https://openalex.org/I173439891"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Henning M\u00fcller","raw_affiliation_strings":["Univ. Hospitals  (Sweden)","Univ. of Applied Sciences Western Switzerland (Switzerland)","Univ. of Geneva (Sweden)"],"affiliations":[{"raw_affiliation_string":"Univ. Hospitals  (Sweden)","institution_ids":[]},{"raw_affiliation_string":"Univ. of Applied Sciences Western Switzerland (Switzerland)","institution_ids":["https://openalex.org/I173439891"]},{"raw_affiliation_string":"Univ. of Geneva (Sweden)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5010508001"],"corresponding_institution_ids":["https://openalex.org/I173439891","https://openalex.org/I35440088"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.05837262,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"9413","issue":null,"first_page":"94133S","last_page":"94133S"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8549677729606628},{"id":"https://openalex.org/keywords/centroid","display_name":"Centroid","score":0.8329206109046936},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7057291865348816},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6381292939186096},{"id":"https://openalex.org/keywords/affine-transformation","display_name":"Affine transformation","score":0.6326056122779846},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5509516000747681},{"id":"https://openalex.org/keywords/region-growing","display_name":"Region growing","score":0.49858951568603516},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.484321266412735},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.43583258986473083},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4037420153617859},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16698560118675232}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8549677729606628},{"id":"https://openalex.org/C146599234","wikidata":"https://www.wikidata.org/wiki/Q511093","display_name":"Centroid","level":2,"score":0.8329206109046936},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7057291865348816},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6381292939186096},{"id":"https://openalex.org/C92757383","wikidata":"https://www.wikidata.org/wiki/Q382497","display_name":"Affine transformation","level":2,"score":0.6326056122779846},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5509516000747681},{"id":"https://openalex.org/C206824153","wikidata":"https://www.wikidata.org/wiki/Q1169834","display_name":"Region growing","level":5,"score":0.49858951568603516},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.484321266412735},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.43583258986473083},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4037420153617859},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16698560118675232},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1117/12.2081204","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2081204","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmh:oai:hesso.tind.io:677","is_oa":true,"landing_page_url":"http://arodes.hes-so.ch/record/677","pdf_url":"https://arodes.hes-so.ch/record/677/files/joyseeree_muller_locatingseed_2015.pdf","source":{"id":"https://openalex.org/S4306402432","display_name":"ArODES (HES-SO (https://www.hes-so.ch/))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210088449","host_organization_name":"HES-SO Gen\u00e8ve","host_organization_lineage":["https://openalex.org/I4210088449"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arodes.hes-so.ch/record/677","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:hesso.tind.io:677","is_oa":true,"landing_page_url":"http://arodes.hes-so.ch/record/677","pdf_url":"https://arodes.hes-so.ch/record/677/files/joyseeree_muller_locatingseed_2015.pdf","source":{"id":"https://openalex.org/S4306402432","display_name":"ArODES (HES-SO (https://www.hes-so.ch/))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210088449","host_organization_name":"HES-SO Gen\u00e8ve","host_organization_lineage":["https://openalex.org/I4210088449"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arodes.hes-so.ch/record/677","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.7200000286102295}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W1749652928.pdf"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W39360085","https://openalex.org/W185977641","https://openalex.org/W1577841048","https://openalex.org/W1978062184","https://openalex.org/W2002104167","https://openalex.org/W2003410902","https://openalex.org/W2026095198","https://openalex.org/W2026616100","https://openalex.org/W2042097455","https://openalex.org/W2050921210","https://openalex.org/W2070949043","https://openalex.org/W2073431334","https://openalex.org/W2079655528","https://openalex.org/W2099111195","https://openalex.org/W2101022607","https://openalex.org/W2109200241","https://openalex.org/W2111308925","https://openalex.org/W2118559567","https://openalex.org/W2127007253","https://openalex.org/W2133287637","https://openalex.org/W2141619730","https://openalex.org/W2144241984","https://openalex.org/W2157380596","https://openalex.org/W4252997396","https://openalex.org/W4253914708","https://openalex.org/W4285719527","https://openalex.org/W6607704848","https://openalex.org/W6644639470","https://openalex.org/W6650982955","https://openalex.org/W6660739387","https://openalex.org/W6681250030"],"related_works":["https://openalex.org/W2394279717","https://openalex.org/W2364730859","https://openalex.org/W3144569342","https://openalex.org/W2386644571","https://openalex.org/W2368273968","https://openalex.org/W2551987074","https://openalex.org/W4281943322","https://openalex.org/W4313052709","https://openalex.org/W2185902295","https://openalex.org/W2055202857"],"abstract_inverted_index":{"Organ":[0],"segmentation":[1,10,147,198,202],"is":[2,52,125,133],"helpful":[3],"for":[4,33,61,86,112,172,218],"decision-support":[5],"in":[6,22,36,54,105,116,213,227,234],"diagnostic":[7],"medicine.":[8],"Region-growing":[9],"algorithms":[11,148],"are":[12,94,211],"popular":[13],"but":[14],"usually":[15],"require":[16],"that":[17,240],"clinicians":[18],"place":[19],"seed":[20,31,84,158],"points":[21,32,85,159],"structures":[23],"manually.":[24],"A":[25],"method":[26,176],"to":[27,96,107,135,143,168,184,196,229],"automatically":[28],"calculate":[29],"the":[30,49,59,72,137,141,154,161,169,235],"segmenting":[34],"organs":[35],"three-dimensional":[37],"(3D),":[38],"non-annotated":[39],"Computed":[40],"Tomography":[41],"(CT)":[42],"and":[43,160,210,223,248],"Magnetic":[44],"Resonance":[45],"(MR)":[46],"volumes":[47,142],"from":[48],"VISCERAL":[50],"dataset":[51],"presented":[53,212],"this":[55,214],"paper.":[56,215],"It":[57,69],"precludes":[58],"need":[60],"manual":[62],"placement":[63],"of":[64,74,81,100,103,123,238,246],"seeds,":[65],"thereby":[66],"saving":[67],"time.":[68],"also":[70],"has":[71],"advantage":[73],"being":[75],"a":[76,109,117,243],"simple":[77],"yet":[78],"effective":[79,201],"means":[80],"finding":[82],"reliable":[83],"segmentation.":[87,173],"Affine":[88],"registration":[89,93,129],"followed":[90],"by":[91],"B-spline":[92],"used":[95,134],"align":[97],"expert":[98],"annotations":[99],"each":[101,124],"organ":[102],"interest":[104],"order":[106,228],"build":[108],"probability":[110,163],"map":[111],"their":[113],"respective":[114],"location":[115],"chosen":[118],"reference":[119],"frame.":[120],"The":[121,127,174,216],"centroid":[122],"determined.":[126],"same":[128],"framework":[130],"as":[131,157,165],"above":[132,175],"warp":[136],"calculated":[138,187],"centroids":[139,156,188],"onto":[140],"be":[144,151],"segmented.":[145],"Existing":[146],"may":[149],"then":[150],"applied":[152],"with":[153],"mapped":[155],"warped":[162],"maps":[164],"an":[166,200],"aid":[167],"stopping":[170],"criteria":[171],"was":[177],"tested":[178],"on":[179],"contrast{enhanced,":[180],"thorax-abdomen":[181],"CT":[182,249],"images":[183],"see":[185],"if":[186,199],"lay":[189],"within":[190],"target":[191],"organs,":[192],"which":[193],"would":[194],"equate":[195],"successful":[197],"algorithm":[203],"were":[204,208,221,225],"used.":[205],"Promising":[206],"results":[207,233],"obtained":[209],"causes":[217],"observed":[219],"failures":[220],"identified":[222],"countermeasures":[224],"proposed":[226],"achieve":[230],"even":[231],"better":[232],"next":[236],"stage":[237],"development":[239],"will":[241],"involve":[242],"wider":[244],"variety":[245],"MR":[247],"images.":[250]},"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
