{"id":"https://openalex.org/W2049997835","doi":"https://doi.org/10.1117/12.2044140","title":"Traversing and labeling interconnected vascular tree structures from 3D medical images","display_name":"Traversing and labeling interconnected vascular tree structures from 3D medical images","publication_year":2014,"publication_date":"2014-03-21","ids":{"openalex":"https://openalex.org/W2049997835","doi":"https://doi.org/10.1117/12.2044140","mag":"2049997835"},"language":"en","primary_location":{"id":"doi:10.1117/12.2044140","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2044140","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091374963","display_name":"Walter G. O\u2019Dell","orcid":"https://orcid.org/0000-0002-3818-2255"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Walter G. O'Dell","raw_affiliation_strings":["Univ. of Florida (United States)","University of Florida, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Florida (United States)","institution_ids":["https://openalex.org/I33213144"]},{"raw_affiliation_string":"University of Florida, United States","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075121603","display_name":"Sindhuja Tirumalai Govindarajan","orcid":"https://orcid.org/0000-0003-1741-0906"},"institutions":[{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sindhuja Tirumalai Govindarajan","raw_affiliation_strings":["Massachusetts General Hospital (United States)","Massachusetts General Hospital   (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Massachusetts General Hospital (United States)","institution_ids":["https://openalex.org/I4210087915"]},{"raw_affiliation_string":"Massachusetts General Hospital   (United States)","institution_ids":["https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050954206","display_name":"Ankit Salgia","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163153","display_name":"Johnson & Johnson (India)","ror":"https://ror.org/05hb5sg68","country_code":"IN","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I4210163153"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ankit Salgia","raw_affiliation_strings":["Johnson & Johnson Ltd. (India)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Johnson & Johnson Ltd. (India)","institution_ids":["https://openalex.org/I4210163153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040045309","display_name":"Satyanarayan Hegde","orcid":null},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Satyanarayan Hegde","raw_affiliation_strings":["Univ. of Florida (United States)","University of Florida, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Florida (United States)","institution_ids":["https://openalex.org/I33213144"]},{"raw_affiliation_string":"University of Florida, United States","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011705312","display_name":"Sreekala Prabhakaran","orcid":"https://orcid.org/0000-0001-8717-9338"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sreekala Prabhakaran","raw_affiliation_strings":["Univ. of Florida (United States)","University of Florida, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Florida (United States)","institution_ids":["https://openalex.org/I33213144"]},{"raw_affiliation_string":"University of Florida, United States","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033024512","display_name":"Ender A. Finol","orcid":"https://orcid.org/0000-0002-0811-9482"},"institutions":[{"id":"https://openalex.org/I45438204","display_name":"The University of Texas at San Antonio","ror":"https://ror.org/01kd65564","country_code":"US","type":"education","lineage":["https://openalex.org/I45438204"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ender A. Finol","raw_affiliation_strings":["The Univ. of Texas at San Antonio (United States)","The University of Texas at San Antonio, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Univ. of Texas at San Antonio (United States)","institution_ids":["https://openalex.org/I45438204"]},{"raw_affiliation_string":"The University of Texas at San Antonio, United States","institution_ids":["https://openalex.org/I45438204"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062378470","display_name":"R. James White","orcid":"https://orcid.org/0000-0003-1399-5206"},"institutions":[{"id":"https://openalex.org/I28792581","display_name":"University of Rochester Medical Center","ror":"https://ror.org/00trqv719","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I28792581","https://openalex.org/I5388228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. James White","raw_affiliation_strings":["Univ. of Rochester Medical Ctr. (United States)","Univ of Rochester Medical Ctr. (United States)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Rochester Medical Ctr. (United States)","institution_ids":["https://openalex.org/I28792581"]},{"raw_affiliation_string":"Univ of Rochester Medical Ctr. (United States)","institution_ids":["https://openalex.org/I28792581"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.6053,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.7265501,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"9034","issue":null,"first_page":"90343C","last_page":"90343C"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10924","display_name":"Cardiovascular Health and Disease Prevention","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10924","display_name":"Cardiovascular Health and Disease Prevention","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10821","display_name":"Cardiovascular Function and Risk Factors","score":0.975600004196167,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/traverse","display_name":"Traverse","score":0.8175067901611328},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.743620753288269},{"id":"https://openalex.org/keywords/tree-traversal","display_name":"Tree traversal","score":0.7231773734092712},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6492459774017334},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6416425704956055},{"id":"https://openalex.org/keywords/tree-structure","display_name":"Tree structure","score":0.5083414912223816},{"id":"https://openalex.org/keywords/imaging-phantom","display_name":"Imaging phantom","score":0.4651445150375366},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.44071677327156067},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4133770167827606},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.323971152305603},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.23494359850883484},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.18658971786499023},{"id":"https://openalex.org/keywords/binary-tree","display_name":"Binary tree","score":0.1695607602596283},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15405458211898804},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11498534679412842}],"concepts":[{"id":"https://openalex.org/C176809094","wikidata":"https://www.wikidata.org/wiki/Q15401496","display_name":"Traverse","level":2,"score":0.8175067901611328},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.743620753288269},{"id":"https://openalex.org/C140745168","wikidata":"https://www.wikidata.org/wiki/Q1210082","display_name":"Tree traversal","level":2,"score":0.7231773734092712},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6492459774017334},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6416425704956055},{"id":"https://openalex.org/C163797641","wikidata":"https://www.wikidata.org/wiki/Q2067937","display_name":"Tree structure","level":3,"score":0.5083414912223816},{"id":"https://openalex.org/C104293457","wikidata":"https://www.wikidata.org/wiki/Q28324852","display_name":"Imaging phantom","level":2,"score":0.4651445150375366},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.44071677327156067},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4133770167827606},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.323971152305603},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.23494359850883484},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.18658971786499023},{"id":"https://openalex.org/C197855036","wikidata":"https://www.wikidata.org/wiki/Q380172","display_name":"Binary tree","level":2,"score":0.1695607602596283},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15405458211898804},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11498534679412842},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2044140","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2044140","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":49,"referenced_works":["https://openalex.org/W196669307","https://openalex.org/W1794373707","https://openalex.org/W1987817308","https://openalex.org/W1989174616","https://openalex.org/W1990919544","https://openalex.org/W1998490521","https://openalex.org/W1999244633","https://openalex.org/W2008526535","https://openalex.org/W2012217749","https://openalex.org/W2013477410","https://openalex.org/W2022751297","https://openalex.org/W2042273019","https://openalex.org/W2043863155","https://openalex.org/W2048733914","https://openalex.org/W2052522225","https://openalex.org/W2058552827","https://openalex.org/W2058760343","https://openalex.org/W2070461514","https://openalex.org/W2076747429","https://openalex.org/W2085545295","https://openalex.org/W2094890516","https://openalex.org/W2096320880","https://openalex.org/W2096579040","https://openalex.org/W2100856438","https://openalex.org/W2106454352","https://openalex.org/W2106827894","https://openalex.org/W2111420319","https://openalex.org/W2123969709","https://openalex.org/W2129534965","https://openalex.org/W2135074746","https://openalex.org/W2138825607","https://openalex.org/W2146538081","https://openalex.org/W2147810187","https://openalex.org/W2149624287","https://openalex.org/W2149713271","https://openalex.org/W2150273959","https://openalex.org/W2169950372","https://openalex.org/W2614800967","https://openalex.org/W3087273884","https://openalex.org/W3140941560","https://openalex.org/W6607954722","https://openalex.org/W6638148686","https://openalex.org/W6647171800","https://openalex.org/W6649758852","https://openalex.org/W6653673457","https://openalex.org/W6675384367","https://openalex.org/W6679367408","https://openalex.org/W6680497045","https://openalex.org/W6682096415"],"related_works":["https://openalex.org/W2377402383","https://openalex.org/W2380835401","https://openalex.org/W2366394613","https://openalex.org/W2152421698","https://openalex.org/W2015574730","https://openalex.org/W2402277566","https://openalex.org/W2383075031","https://openalex.org/W2376359377","https://openalex.org/W2361165494","https://openalex.org/W2010603648"],"abstract_inverted_index":{"<strong>Purpose:</strong>":[0],"Detailed":[1],"characterization":[2],"of":[3,15,18,37,47,93,121,129,144,156,174,246],"pulmonary":[4,239],"vascular":[5,19,86,231],"anatomy":[6],"has":[7,64],"important":[8],"applications":[9],"for":[10,133,226],"the":[11,32,48,103,140,197,205,214,247],"diagnosis":[12],"and":[13,39,42,53,60,76,83,99,106,111,136,171,228,233],"management":[14],"a":[16,78,90,127,142,166,172,223],"variety":[17,128],"diseases.":[20],"Prior":[21],"efforts":[22],"have":[23,221],"emphasized":[24],"using":[25,242],"vessel":[26,49,117,200,206],"segmentation":[27],"to":[28,51,74,81,114,238],"gather":[29],"information":[30],"on":[31],"number":[33,36],"or":[34],"branches,":[35],"bifurcations,":[38],"branch":[40,109],"length":[41],"volume,":[43],"but":[44],"accurate":[45],"traversal":[46],"tree":[50,62,201,207],"identify":[52],"repair":[54],"erroneous":[55],"interconnections":[56,130],"between":[57],"adjacent":[58],"branches":[59],"neighboring":[61],"structures":[63,202,208],"not":[65],"been":[66],"carefully":[67],"considered.":[68],"In":[69],"this":[70],"study,":[71],"we":[72],"endeavor":[73],"develop":[75],"implement":[77],"successful":[79],"approach":[80],"distinguishing":[82],"characterizing":[84],"individual":[85],"trees":[87,232],"from":[88,213],"among":[89],"complex":[91],"intermingling":[92],"trees.":[94,118],"<strong>Methods:</strong>":[95],"We":[96,220],"developed":[97,222],"strategies":[98],"parameters":[100],"in":[101,185],"which":[102],"algorithm":[104],"identifies":[105],"repairs":[107],"false":[108],"inter-tree":[110],"intra-tree":[112],"connections":[113],"traverse":[115],"complicated":[116],"A":[119],"series":[120,143],"two-dimensional":[122],"(2D)":[123],"virtual":[124,188],"datasets":[125,151],"with":[126],"were":[131,152,210],"constructed":[132],"development,":[134],"testing,":[135],"validation.":[137],"To":[138],"demonstrate":[139],"approach,":[141],"real":[145,193],"3D":[146,194,243],"computed":[147],"tomography":[148],"(CT)":[149],"lung":[150,178,216],"obtained,":[153],"including":[154],"that":[155,209],"an":[157,161,175],"anthropomorphic":[158],"chest":[159,164,169],"phantom;":[160],"adult":[162],"human":[163],"CT;":[165,170],"pediatric":[167],"patient":[168],"micro-CT":[173],"excised":[176],"rat":[177],"preparation.":[179],"<strong>Results:</strong>":[180],"Our":[181],"method":[182],"was":[183],"correct":[184],"all":[186],"2D":[187],"test":[189],"datasets.":[190],"For":[191],"each":[192],"CT":[195,217,244],"dataset,":[196],"resulting":[198],"simulated":[199],"faithfully":[203],"depicted":[204],"originally":[211],"extracted":[212],"corresponding":[215],"scans.":[218],"<strong>Conclusion:</strong>":[219],"comprehensive":[224],"strategy":[225],"traversing":[227],"labeling":[229],"interconnected":[230],"successfully":[234],"implemented":[235],"its":[236],"application":[237],"vessels":[240],"observed":[241],"images":[245],"chest.":[248]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
