{"id":"https://openalex.org/W1976661769","doi":"https://doi.org/10.1117/12.2043308","title":"A fast method for approximate registration of whole-slide images of serial sections using local curvature","display_name":"A fast method for approximate registration of whole-slide images of serial sections using local curvature","publication_year":2014,"publication_date":"2014-03-20","ids":{"openalex":"https://openalex.org/W1976661769","doi":"https://doi.org/10.1117/12.2043308","mag":"1976661769"},"language":"en","primary_location":{"id":"doi:10.1117/12.2043308","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2043308","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011418049","display_name":"Nicholas Trahearn","orcid":"https://orcid.org/0000-0002-8596-0996"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Nicholas Trahearn","raw_affiliation_strings":["The Univ. of Warwick (United Kingdom)","The University of Warwick, United Kingdom"],"affiliations":[{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]},{"raw_affiliation_string":"The University of Warwick, United Kingdom","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016569870","display_name":"David Epstein","orcid":null},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Epstein","raw_affiliation_strings":["The Univ. of Warwick (United Kingdom)","The University of Warwick, United Kingdom"],"affiliations":[{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]},{"raw_affiliation_string":"The University of Warwick, United Kingdom","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084778782","display_name":"David Snead","orcid":"https://orcid.org/0000-0002-0766-9650"},"institutions":[{"id":"https://openalex.org/I2802705189","display_name":"University Hospitals Coventry and Warwickshire NHS Trust","ror":"https://ror.org/025n38288","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2802705189"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Snead","raw_affiliation_strings":["Univ. Hospitals Coventry and Warwickshire (United Kingdom)","University Hospitals Coventry and Warwickshire, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Univ. Hospitals Coventry and Warwickshire (United Kingdom)","institution_ids":["https://openalex.org/I2802705189"]},{"raw_affiliation_string":"University Hospitals Coventry and Warwickshire, United Kingdom","institution_ids":["https://openalex.org/I2802705189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014188852","display_name":"Ian A. Cree","orcid":"https://orcid.org/0000-0001-5007-9456"},"institutions":[{"id":"https://openalex.org/I2802705189","display_name":"University Hospitals Coventry and Warwickshire NHS Trust","ror":"https://ror.org/025n38288","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2802705189"]},{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ian Cree","raw_affiliation_strings":["The Univ. of Warwick (United Kingdom)","Univ. Hospitals Coventry and Warwickshire (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]},{"raw_affiliation_string":"Univ. Hospitals Coventry and Warwickshire (United Kingdom)","institution_ids":["https://openalex.org/I2802705189"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069179055","display_name":"Nasir Rajpoot","orcid":"https://orcid.org/0000-0002-4706-1308"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]},{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["GB","QA"],"is_corresponding":false,"raw_author_name":"Nasir Rajpoot","raw_affiliation_strings":["Qatar Univ. (Qatar)","The Univ. of Warwick (United Kingdom)"],"affiliations":[{"raw_affiliation_string":"Qatar Univ. (Qatar)","institution_ids":["https://openalex.org/I60342839"]},{"raw_affiliation_string":"The Univ. of Warwick (United Kingdom)","institution_ids":["https://openalex.org/I39555362"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5011418049"],"corresponding_institution_ids":["https://openalex.org/I39555362"],"apc_list":null,"apc_paid":null,"fwci":0.7316,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.73896454,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"9041","issue":null,"first_page":"90410E","last_page":"90410E"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9829000234603882,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/curvature","display_name":"Curvature","score":0.7769055366516113},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.5981113910675049},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5973042249679565},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5759449005126953},{"id":"https://openalex.org/keywords/maxima","display_name":"Maxima","score":0.5044704675674438},{"id":"https://openalex.org/keywords/scaling","display_name":"Scaling","score":0.48195764422416687},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.4683505892753601},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4677693247795105},{"id":"https://openalex.org/keywords/rotation","display_name":"Rotation (mathematics)","score":0.4633975327014923},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.4345967471599579},{"id":"https://openalex.org/keywords/grayscale","display_name":"Grayscale","score":0.4208982586860657},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4186481833457947},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.41026240587234497},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3172481656074524},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.27578410506248474},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.20075362920761108}],"concepts":[{"id":"https://openalex.org/C195065555","wikidata":"https://www.wikidata.org/wiki/Q214881","display_name":"Curvature","level":2,"score":0.7769055366516113},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.5981113910675049},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5973042249679565},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5759449005126953},{"id":"https://openalex.org/C91528185","wikidata":"https://www.wikidata.org/wiki/Q520952","display_name":"Maxima","level":3,"score":0.5044704675674438},{"id":"https://openalex.org/C99844830","wikidata":"https://www.wikidata.org/wiki/Q102441924","display_name":"Scaling","level":2,"score":0.48195764422416687},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.4683505892753601},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4677693247795105},{"id":"https://openalex.org/C74050887","wikidata":"https://www.wikidata.org/wiki/Q848368","display_name":"Rotation (mathematics)","level":2,"score":0.4633975327014923},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.4345967471599579},{"id":"https://openalex.org/C78201319","wikidata":"https://www.wikidata.org/wiki/Q685727","display_name":"Grayscale","level":3,"score":0.4208982586860657},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4186481833457947},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.41026240587234497},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3172481656074524},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.27578410506248474},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.20075362920761108},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.0},{"id":"https://openalex.org/C52119013","wikidata":"https://www.wikidata.org/wiki/Q50637","display_name":"Art history","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C554144382","wikidata":"https://www.wikidata.org/wiki/Q213156","display_name":"Performance art","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1117/12.2043308","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2043308","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},{"id":"pmh:oai:qspace.qu.edu.qa:10576/4521","is_oa":false,"landing_page_url":"http://hdl.handle.net/10576/4521","pdf_url":null,"source":{"id":"https://openalex.org/S4306400014","display_name":"Qatar University QSpace (Qatar University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I60342839","host_organization_name":"Qatar University","host_organization_lineage":["https://openalex.org/I60342839"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1979469604","https://openalex.org/W2037255757","https://openalex.org/W2052277674","https://openalex.org/W2097543505","https://openalex.org/W2109115250","https://openalex.org/W2114785422","https://openalex.org/W2125241596","https://openalex.org/W2132280095","https://openalex.org/W2134236847","https://openalex.org/W2156875677","https://openalex.org/W2169435361","https://openalex.org/W2169937647","https://openalex.org/W4255355362","https://openalex.org/W6676419730"],"related_works":["https://openalex.org/W2901492383","https://openalex.org/W2901973005","https://openalex.org/W2913309527","https://openalex.org/W2159775375","https://openalex.org/W2055124383","https://openalex.org/W1841759989","https://openalex.org/W115686965","https://openalex.org/W4308335705","https://openalex.org/W1673232818","https://openalex.org/W2009619919"],"abstract_inverted_index":{"We":[0,120],"present":[1],"a":[2,61,74,110],"method":[3,184],"for":[4,76],"fast,":[5],"approximate":[6,37],"registration":[7,19,83,224],"of":[8,12,35,45,79,88,92,107,113,129,141,200,207],"whole-slide":[9],"images":[10,209],"(WSIs)":[11],"histopathology":[13,17],"serial":[14],"sections.":[15,143],"Popular":[16],"slide":[18],"methods":[20],"in":[21,32,67,198,218],"the":[22,33,46,89,114,133,137,156,159,172,180,210],"existing":[23,221],"literature":[24],"tend":[25],"towards":[26],"intensity-based":[27],"approaches.<sup>1,":[28],"2</sup>":[29],"Further":[30],"input,":[31],"form":[34],"an":[36],"initial":[38],"transformation":[39,55,62],"to":[40,43,57,102,131,136,171,178,188,220],"be":[41,58],"applied":[42],"one":[44],"two":[47],"WSIs,":[48],"is":[49,63,73,84,109,147,185],"then":[50],"usually":[51],"required,":[52],"and":[53,70,191,194,215],"this":[54,68],"needs":[56],"optimised.":[59],"Such":[60],"not":[64],"readily":[65],"available":[66],"context":[69],"thus":[71],"there":[72],"need":[75],"fast":[77],"approximation":[78],"these":[80],"parameters.":[81],"Fast":[82],"achieved":[85],"by":[86],"comparison":[87,219],"external":[90],"boundaries":[91],"adjacent":[93,142],"tissue":[94],"sections,":[95],"using":[96],"local":[97,126],"curvature":[98,108,130,150],"on":[99],"multiple":[100],"scales":[101,153],"assess":[103],"similarity.":[104],"Our":[105,183],"representation":[106],"modified":[111],"version":[112],"Curvature":[115],"Scale":[116],"Space":[117],"(CSS)<sup>3</sup>":[118],"image.":[119],"substitute":[121],"zero":[122],"crossings":[123],"with":[124],"signed":[125],"absolute":[127],"maxima":[128,151,162,174],"improve":[132],"registration's":[134],"robustness":[135],"subtle":[138],"morphological":[139],"differences":[140],"A":[144],"pairwise":[145],"matching":[146,157],"made":[148],"between":[149,161],"at":[152,164],"increasing":[154],"exponentially,":[155],"minimizes":[158],"distance":[160],"pairs":[163,175],"each":[165],"scale.":[166],"The":[167],"boundary":[168],"points":[169],"corresponding":[170],"matched":[173],"are":[176],"used":[177],"estimate":[179],"desired":[181],"transformation.":[182],"highly":[186],"robust":[187],"translation,":[189],"rotation,":[190],"linear":[192],"scaling,":[193],"shows":[195,212],"good":[196],"performance":[197],"cases":[199],"moderate":[201],"non-linear":[202],"scaling.":[203],"On":[204],"our":[205],"set":[206],"test":[208],"algorithm":[211],"improved":[213],"reliability":[214],"processing":[216],"speed":[217],"CSS":[222],"based":[223],"methods.":[225]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
