{"id":"https://openalex.org/W1966338750","doi":"https://doi.org/10.1117/12.2042589","title":"FilooT: a visualization tool for exploring genomic data","display_name":"FilooT: a visualization tool for exploring genomic data","publication_year":2013,"publication_date":"2013-12-23","ids":{"openalex":"https://openalex.org/W1966338750","doi":"https://doi.org/10.1117/12.2042589","mag":"1966338750"},"language":"en","primary_location":{"id":"doi:10.1117/12.2042589","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2042589","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071468767","display_name":"Mahshid Zeinaly","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mahshid Zeinaly","raw_affiliation_strings":["Simon Fraser Univ. (Canada)","Simon Fraser University CANADA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simon Fraser Univ. (Canada)","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"Simon Fraser University CANADA","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043780212","display_name":"Mina Soltangheis","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mina Soltangheis","raw_affiliation_strings":["Simon Fraser Univ. (Canada)","Simon Fraser University CANADA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simon Fraser Univ. (Canada)","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"Simon Fraser University CANADA","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040961656","display_name":"Chris Shaw","orcid":"https://orcid.org/0000-0002-6940-7971"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Chris D. Shaw","raw_affiliation_strings":["Simon Fraser Univ. (Canada)","Simon Fraser University CANADA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simon Fraser Univ. (Canada)","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"Simon Fraser University CANADA","institution_ids":["https://openalex.org/I18014758"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2763,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56890801,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"9017","issue":null,"first_page":"901702","last_page":"901702"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9642000198364258,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9613999724388123,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8251586556434631},{"id":"https://openalex.org/keywords/visual-analytics","display_name":"Visual analytics","score":0.7532433271408081},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7442740201950073},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5873295068740845},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.5636706948280334},{"id":"https://openalex.org/keywords/data-exploration","display_name":"Data exploration","score":0.5136851668357849},{"id":"https://openalex.org/keywords/card-sorting","display_name":"Card sorting","score":0.5097329020500183},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.49386459589004517},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.4928160011768341},{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.49036335945129395},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4898204505443573},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.47704046964645386},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.43971821665763855},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4385156035423279},{"id":"https://openalex.org/keywords/information-visualization","display_name":"Information visualization","score":0.43042415380477905},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4010079503059387},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2704138159751892},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.19148367643356323},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09519654512405396}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8251586556434631},{"id":"https://openalex.org/C59732488","wikidata":"https://www.wikidata.org/wiki/Q2528440","display_name":"Visual analytics","level":3,"score":0.7532433271408081},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7442740201950073},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5873295068740845},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.5636706948280334},{"id":"https://openalex.org/C2780977526","wikidata":"https://www.wikidata.org/wiki/Q42417149","display_name":"Data exploration","level":3,"score":0.5136851668357849},{"id":"https://openalex.org/C5563205","wikidata":"https://www.wikidata.org/wiki/Q686043","display_name":"Card sorting","level":3,"score":0.5097329020500183},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.49386459589004517},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.4928160011768341},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.49036335945129395},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4898204505443573},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.47704046964645386},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.43971821665763855},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4385156035423279},{"id":"https://openalex.org/C185578843","wikidata":"https://www.wikidata.org/wiki/Q10609775","display_name":"Information visualization","level":3,"score":0.43042415380477905},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4010079503059387},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2704138159751892},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.19148367643356323},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09519654512405396},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2042589","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2042589","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W1497556049","https://openalex.org/W1506225503","https://openalex.org/W1543636183","https://openalex.org/W1973354049","https://openalex.org/W1975871650","https://openalex.org/W1998053506","https://openalex.org/W2005424318","https://openalex.org/W2006030282","https://openalex.org/W2028770149","https://openalex.org/W2033988064","https://openalex.org/W2039114007","https://openalex.org/W2041877620","https://openalex.org/W2050427657","https://openalex.org/W2058203255","https://openalex.org/W2064236037","https://openalex.org/W2074494141","https://openalex.org/W2075938899","https://openalex.org/W2085369494","https://openalex.org/W2089507613","https://openalex.org/W2090601268","https://openalex.org/W2107174460","https://openalex.org/W2112439337","https://openalex.org/W2120323262","https://openalex.org/W2120772351","https://openalex.org/W2132881639","https://openalex.org/W2142493242","https://openalex.org/W2155733062","https://openalex.org/W2160382748","https://openalex.org/W2302295829","https://openalex.org/W4246204301","https://openalex.org/W6629671706","https://openalex.org/W6630047425","https://openalex.org/W6650118559","https://openalex.org/W6657798798","https://openalex.org/W6658859502","https://openalex.org/W6660293605","https://openalex.org/W6669271690","https://openalex.org/W6672730152","https://openalex.org/W6676338655","https://openalex.org/W6683016158"],"related_works":["https://openalex.org/W2906286747","https://openalex.org/W4234837714","https://openalex.org/W2914351970","https://openalex.org/W1992888948","https://openalex.org/W2079744825","https://openalex.org/W4365511789","https://openalex.org/W2024712933","https://openalex.org/W3001728174","https://openalex.org/W2007038549","https://openalex.org/W1966338750"],"abstract_inverted_index":{"In":[0,36],"order":[1],"to":[2,62,93],"enhance":[3],"analysis":[4,155],"of":[5,9,28,44,65,80,142,156],"synthetic":[6],"health":[7],"data":[8],"the":[10,29,46,55,63,68,73,82,90,101,107,111,115,143,157],"IEEE":[11],"VAST":[12],"Challenge":[13],"2010,":[14],"we":[15,39,123],"introduce":[16],"an":[17,132],"interactive":[18,42],"Visual":[19],"Analytics":[20],"tool":[21],"called":[22],"FilooT":[23],"designed":[24],"as":[25],"a":[26,78,125],"part":[27],"Interactive":[30],"Multi-genomic":[31],"Analysis":[32],"System":[33],"(IMAS)":[34],"project.":[35],"this":[37],"paper,":[38],"describe":[40],"different":[41,66],"views":[43],"FilooT:":[45],"Tabular":[47],"View":[48,57,70,84,92],"for":[49,58,71,85,96,119],"exploring":[50],"and":[51,89,110,145],"comparing":[52],"genetic":[53],"sequences,":[54,81],"Matrix":[56],"sorting":[59],"sequences":[60,88],"according":[61],"values":[64],"characteristics,":[67],"P-value":[69],"finding":[72,86],"most":[74],"important":[75],"mutations":[76],"across":[77],"family":[79],"Graph":[83],"related":[87],"Group":[91],"group":[94],"them":[95],"further":[97],"investigation.":[98],"We":[99],"followed":[100,130],"Nested":[102],"Process":[103],"Model":[104],"framework":[105],"throughout":[106],"design":[108,117,160],"process":[109],"evaluation.":[112],"To":[113],"understand":[114],"tool's":[116],"capabilities":[118],"target":[120],"domain":[121],"analysts,":[122],"conducted":[124],"User":[126],"Experience":[127],"scenario-based":[128],"study":[129],"by":[131],"informal":[133],"interview.":[134],"The":[135,153],"findings":[136],"indicated":[137],"how":[138],"analysts":[139],"employ":[140],"each":[141],"visualization":[144],"interaction":[146],"designs":[147],"in":[148],"their":[149],"Bioinformatics":[150],"task-analysis":[151],"process.":[152],"critical":[154],"results":[158],"inspired":[159],"informing":[161],"suggestions.":[162]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
