{"id":"https://openalex.org/W2090754927","doi":"https://doi.org/10.1117/12.2007601","title":"Multi-organ segmentation from 3D abdominal CT images using patient-specific weighted-probabilistic atlas","display_name":"Multi-organ segmentation from 3D abdominal CT images using patient-specific weighted-probabilistic atlas","publication_year":2013,"publication_date":"2013-03-13","ids":{"openalex":"https://openalex.org/W2090754927","doi":"https://doi.org/10.1117/12.2007601","mag":"2090754927"},"language":"en","primary_location":{"id":"doi:10.1117/12.2007601","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2007601","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030650712","display_name":"Chengwen Chu","orcid":null},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Chengwen Chu","raw_affiliation_strings":["Nagoya Univ. (Japan)","[Nagoya University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nagoya Univ. (Japan)","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"[Nagoya University, Japan]","institution_ids":["https://openalex.org/I60134161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074920808","display_name":"Masahiro Oda","orcid":"https://orcid.org/0000-0001-7714-422X"},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masahiro Oda","raw_affiliation_strings":["Nagoya Univ. (Japan)","[Nagoya University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nagoya Univ. (Japan)","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"[Nagoya University, Japan]","institution_ids":["https://openalex.org/I60134161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004959911","display_name":"Takayuki Kitasaka","orcid":"https://orcid.org/0000-0003-1648-1999"},"institutions":[{"id":"https://openalex.org/I190508380","display_name":"Aichi Institute of Technology","ror":"https://ror.org/02qsepw74","country_code":"JP","type":"education","lineage":["https://openalex.org/I190508380"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takayuki Kitasaka","raw_affiliation_strings":["Aichi Institute of Technology (Japan)","Aichi Inst. of Technol., Japan#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aichi Institute of Technology (Japan)","institution_ids":["https://openalex.org/I190508380"]},{"raw_affiliation_string":"Aichi Inst. of Technol., Japan#TAB#","institution_ids":["https://openalex.org/I190508380"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005597709","display_name":"Kazunari Misawa","orcid":"https://orcid.org/0000-0002-2047-3919"},"institutions":[{"id":"https://openalex.org/I4210133851","display_name":"Aichi Cancer Center","ror":"https://ror.org/03kfmm080","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210133851"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazunari Misawa","raw_affiliation_strings":["Aichi Cancer Ctr. Hospital (Japan)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aichi Cancer Ctr. Hospital (Japan)","institution_ids":["https://openalex.org/I4210133851"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087008478","display_name":"Michitaka Fujiwara","orcid":"https://orcid.org/0000-0002-7189-5580"},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Michitaka Fujiwara","raw_affiliation_strings":["Nagoya Univ. (Japan)","[Nagoya University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nagoya Univ. (Japan)","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"[Nagoya University, Japan]","institution_ids":["https://openalex.org/I60134161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054846833","display_name":"Yuichiro Hayashi","orcid":"https://orcid.org/0000-0001-5241-8669"},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuichiro Hayashi","raw_affiliation_strings":["Nagoya Univ. (Japan)","[Nagoya University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nagoya Univ. (Japan)","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"[Nagoya University, Japan]","institution_ids":["https://openalex.org/I60134161"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107826063","display_name":"Robin Wolz","orcid":null},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Robin Wolz","raw_affiliation_strings":["Imperial College London (United Kingdom)","Imperial College, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Imperial College London (United Kingdom)","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Imperial College, London, United Kingdom","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006461848","display_name":"Daniel Rueckert","orcid":"https://orcid.org/0000-0002-5683-5889"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Daniel Rueckert","raw_affiliation_strings":["Imperial College London (United Kingdom)","Imperial College, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Imperial College London (United Kingdom)","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Imperial College, London, United Kingdom","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032527419","display_name":"Kensaku Mori","orcid":"https://orcid.org/0000-0002-0100-4797"},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kensaku Mori","raw_affiliation_strings":["Nagoya Univ. (Japan)","[Nagoya University, Japan]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nagoya Univ. (Japan)","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"[Nagoya University, Japan]","institution_ids":["https://openalex.org/I60134161"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"8669","issue":null,"first_page":"86693Y","last_page":"86693Y"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7491952776908875},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7428449392318726},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.673987865447998},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.621100902557373},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5802008509635925},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5612826943397522},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5475545525550842},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5168164968490601},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.48837631940841675},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.4662999212741852},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16602152585983276},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.14332136511802673},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.09944722056388855}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7491952776908875},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7428449392318726},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.673987865447998},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.621100902557373},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5802008509635925},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5612826943397522},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5475545525550842},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5168164968490601},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.48837631940841675},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.4662999212741852},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16602152585983276},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.14332136511802673},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.09944722056388855}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.2007601","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.2007601","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320315724","display_name":"Kayamori Foundation of Informational Science Advancement","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2185902295","https://openalex.org/W2103507220","https://openalex.org/W3144569342","https://openalex.org/W2945274617","https://openalex.org/W4313052709","https://openalex.org/W2022929107","https://openalex.org/W2055202857","https://openalex.org/W80586315","https://openalex.org/W4205800335","https://openalex.org/W2758994127"],"abstract_inverted_index":{"Organ":[0],"segmentation":[1,21,54,80,102,170,199],"of":[2,9,16,39,55,94,128,212,232],"CT":[3,58,213],"volumes":[4,59,214],"is":[5,70,90,116],"a":[6,62,73,95,111,149,168,178],"basic":[7],"function":[8],"computer-aided":[10],"diagnosis":[11],"and":[12,29,98,142,172,192,215,226,236],"surgery-assistance":[13],"systems.":[14],"Many":[15],"these":[17],"systems":[18],"implement":[19],"organ":[20,40,67],"methods":[22],"that":[23,30,218],"are":[24,31],"limited":[25],"to":[26,120,146,166,202,209],"specific":[27,150],"organs":[28],"not":[32],"robust":[33],"in":[34,72,131,163],"dealing":[35],"with":[36,228],"inter-subject":[37,203],"differences":[38],"shape":[41],"or":[42],"position.":[43,68],"In":[44,105],"this":[45],"paper,":[46],"we":[47,77,109],"propose":[48],"an":[49,83],"automated":[50],"method":[51,182,208],"for":[52,66,79,153],"multi-organ":[53],"abdominal":[56],"3D":[57],"by":[60,81,135,176],"using":[61,92,177],"patient-specific,":[63],"weighted-probabilistic":[64],"atlas":[65,84,152,162],"This":[69,89],"achieved":[71],"two-step":[74],"process.":[75],"First,":[76],"prepare":[78],"dividing":[82],"database":[85],"into":[86],"multiple":[87],"clusters.":[88],"done":[91],"pairs":[93],"training":[96],"image":[97,115,145],"the":[99,106,117,121,129,132,137,140,143,159,188,222],"corresponding":[100],"manual":[101],"data":[103],"set.":[104],"next":[107],"step,":[108],"choose":[110],"cluster":[112,134],"whose":[113],"template":[114],"most":[118],"similar":[119],"target":[122,144,155],"image.":[123,156],"We":[124,157,205],"then":[125,173],"weight":[126],"all":[127],"atlases":[130,141],"selected":[133],"calculating":[136],"similarities":[138],"between":[139],"dynamically":[147],"generate":[148],"probabilistic":[151,161],"each":[154],"use":[158],"generated":[160],"MAP":[164],"estimation":[165],"obtain":[167],"rough":[169],"result":[171],"refine":[174],"it":[175,219],"graph-cut":[179],"method.":[180],"Our":[181,194],"can":[183],"simultaneously":[184],"segment":[185,221],"four":[186],"organs:":[187],"liver,":[189,223],"spleen,":[190,224],"pancreas":[191,225],"kidneys.":[193],"weighting":[195],"scheme":[196],"greatly":[197],"reduces":[198],"error":[200],"due":[201],"differences.":[204],"applied":[206],"our":[207],"100":[210],"cases":[211],"thus":[216],"showed":[217],"could":[220],"kidneys":[227],"Dice":[229],"similarity":[230],"coefficients":[231],"95.2%,":[233],"89.7%,":[234],"69.6%,":[235],"89.4%,":[237],"respectively.":[238]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
