{"id":"https://openalex.org/W2045156863","doi":"https://doi.org/10.1109/tpami.2014.2343973","title":"Data Fusion by Matrix Factorization","display_name":"Data Fusion by Matrix Factorization","publication_year":2014,"publication_date":"2014-07-29","ids":{"openalex":"https://openalex.org/W2045156863","doi":"https://doi.org/10.1109/tpami.2014.2343973","mag":"2045156863","pmid":"https://pubmed.ncbi.nlm.nih.gov/26353207"},"language":"en","primary_location":{"id":"doi:10.1109/tpami.2014.2343973","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tpami.2014.2343973","pdf_url":null,"source":{"id":"https://openalex.org/S199944782","display_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","issn_l":"0162-8828","issn":["0162-8828","1939-3539","2160-9292"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://repozitorij.uni-lj.si/IzpisGradiva.php?id=69116","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086052373","display_name":"Marinka \u017ditnik","orcid":"https://orcid.org/0000-0001-8530-7228"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Marinka Zitnik","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, Tr\u017ea\u0161ka 25, SI-1000 Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Tr\u017ea\u0161ka 25, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073792028","display_name":"Bla\u017e Zupan","orcid":"https://orcid.org/0000-0002-5864-7056"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["SI","US"],"is_corresponding":false,"raw_author_name":"Blaz Zupan","raw_affiliation_strings":["Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030","Faculty of Computer and Information Science, University of Ljubljana, Tr\u017ea\u0161ka 25, SI-1000 Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Tr\u017ea\u0161ka 25, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":5.8502,"has_fulltext":false,"cited_by_count":216,"citation_normalized_percentile":{"value":0.97185987,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"37","issue":"1","first_page":"41","last_page":"53"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sensor-fusion","display_name":"Sensor fusion","score":0.7506453990936279},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6860767602920532},{"id":"https://openalex.org/keywords/matrix-decomposition","display_name":"Matrix decomposition","score":0.6141940355300903},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6126018762588501},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5850515961647034},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.5600951910018921},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5018713474273682},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.4829532504081726},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.4817502498626709},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.462083101272583},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.41687893867492676},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4158235788345337},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37744542956352234},{"id":"https://openalex.org/keywords/eigenvalues-and-eigenvectors","display_name":"Eigenvalues and eigenvectors","score":0.07814517617225647}],"concepts":[{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.7506453990936279},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6860767602920532},{"id":"https://openalex.org/C42355184","wikidata":"https://www.wikidata.org/wiki/Q1361088","display_name":"Matrix decomposition","level":3,"score":0.6141940355300903},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6126018762588501},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5850515961647034},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.5600951910018921},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5018713474273682},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.4829532504081726},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.4817502498626709},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.462083101272583},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.41687893867492676},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4158235788345337},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37744542956352234},{"id":"https://openalex.org/C158693339","wikidata":"https://www.wikidata.org/wiki/Q190524","display_name":"Eigenvalues and eigenvectors","level":2,"score":0.07814517617225647},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/tpami.2014.2343973","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tpami.2014.2343973","pdf_url":null,"source":{"id":"https://openalex.org/S199944782","display_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","issn_l":"0162-8828","issn":["0162-8828","1939-3539","2160-9292"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","raw_type":"journal-article"},{"id":"pmid:26353207","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26353207","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on pattern analysis and machine intelligence","raw_type":null},{"id":"pmh:oai:repozitorij.uni-lj.si:IzpisGradiva.php?id=69116","is_oa":true,"landing_page_url":"https://repozitorij.uni-lj.si/IzpisGradiva.php?id=69116","pdf_url":null,"source":{"id":"https://openalex.org/S4377196268","display_name":"Repository of the University of Ljubljana (University of Ljubljana)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I153976015","host_organization_name":"University of Ljubljana","host_organization_lineage":["https://openalex.org/I153976015"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:arXiv.org:1307.0803","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1307.0803","pdf_url":"https://arxiv.org/pdf/1307.0803","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:repozitorij.uni-lj.si:IzpisGradiva.php?id=69116","is_oa":true,"landing_page_url":"https://repozitorij.uni-lj.si/IzpisGradiva.php?id=69116","pdf_url":null,"source":{"id":"https://openalex.org/S4377196268","display_name":"Repository of the University of Ljubljana (University of Ljubljana)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I153976015","host_organization_name":"University of Ljubljana","host_organization_lineage":["https://openalex.org/I153976015"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1162140856","display_name":null,"funder_award_id":"P01 HD39691","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"}],"funders":[{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":89,"referenced_works":["https://openalex.org/W23802834","https://openalex.org/W48643329","https://openalex.org/W183401690","https://openalex.org/W205829674","https://openalex.org/W211285526","https://openalex.org/W1511160855","https://openalex.org/W1542652324","https://openalex.org/W1544449255","https://openalex.org/W1550614472","https://openalex.org/W1914599625","https://openalex.org/W1971912363","https://openalex.org/W1972821149","https://openalex.org/W1983762150","https://openalex.org/W1993511029","https://openalex.org/W1993754619","https://openalex.org/W2002834872","https://openalex.org/W2015583498","https://openalex.org/W2018518196","https://openalex.org/W2020082133","https://openalex.org/W2024165284","https://openalex.org/W2030103537","https://openalex.org/W2031823405","https://openalex.org/W2035979693","https://openalex.org/W2044511756","https://openalex.org/W2053369230","https://openalex.org/W2062649377","https://openalex.org/W2081307663","https://openalex.org/W2090247362","https://openalex.org/W2090890710","https://openalex.org/W2094791588","https://openalex.org/W2096453387","https://openalex.org/W2096812863","https://openalex.org/W2098740506","https://openalex.org/W2100714130","https://openalex.org/W2102310568","https://openalex.org/W2103017472","https://openalex.org/W2104472920","https://openalex.org/W2105877777","https://openalex.org/W2106372467","https://openalex.org/W2106789617","https://openalex.org/W2109555487","https://openalex.org/W2109743529","https://openalex.org/W2109761160","https://openalex.org/W2113573459","https://openalex.org/W2116589987","https://openalex.org/W2117420919","https://openalex.org/W2117486996","https://openalex.org/W2117968640","https://openalex.org/W2119297694","https://openalex.org/W2119852072","https://openalex.org/W2120372853","https://openalex.org/W2123228027","https://openalex.org/W2127553917","https://openalex.org/W2131848047","https://openalex.org/W2135029798","https://openalex.org/W2136294701","https://openalex.org/W2136787567","https://openalex.org/W2138014578","https://openalex.org/W2142517301","https://openalex.org/W2142674578","https://openalex.org/W2145295623","https://openalex.org/W2146512693","https://openalex.org/W2150671144","https://openalex.org/W2153611354","https://openalex.org/W2159314924","https://openalex.org/W2161228561","https://openalex.org/W2161444669","https://openalex.org/W2162720347","https://openalex.org/W2164184461","https://openalex.org/W2167769381","https://openalex.org/W2171188027","https://openalex.org/W2351287725","https://openalex.org/W2570589864","https://openalex.org/W2911964244","https://openalex.org/W2963883318","https://openalex.org/W4297787516","https://openalex.org/W6600958843","https://openalex.org/W6608344535","https://openalex.org/W6630631696","https://openalex.org/W6632433782","https://openalex.org/W6637521775","https://openalex.org/W6641446668","https://openalex.org/W6674745195","https://openalex.org/W6675788551","https://openalex.org/W6676181016","https://openalex.org/W6677619952","https://openalex.org/W6678347102","https://openalex.org/W6680012447","https://openalex.org/W6685188343"],"related_works":["https://openalex.org/W2132659060","https://openalex.org/W2031992971","https://openalex.org/W3214791684","https://openalex.org/W2353265673","https://openalex.org/W2031175860","https://openalex.org/W2152662039","https://openalex.org/W2062592733","https://openalex.org/W2392133813","https://openalex.org/W2145797872","https://openalex.org/W8795902"],"abstract_inverted_index":{"For":[0],"most":[1],"problems":[2],"in":[3,94],"science":[4],"and":[5,20,46,55,104,122,144],"engineering":[6],"we":[7,63],"can":[8,31,39,85,91,149],"obtain":[9],"data":[10,29,36,50,54,56,66,77,89,120,131,134,141,155],"sets":[11,30],"that":[12,74,90],"describe":[13,64],"the":[14,22,61,108],"observed":[15],"system":[16],"from":[17,99,152],"various":[18],"perspectives":[19],"record":[21],"behavior":[23],"of":[24,110,125],"its":[25],"individual":[26],"components.":[27],"Heterogeneous":[28],"be":[32,92,150],"collectively":[33],"mined":[34],"by":[35,128],"fusion.":[37],"Fusion":[38],"focus":[40],"on":[41],"a":[42,65,95],"specific":[43],"target":[44],"relation":[45],"exploit":[47],"directly":[48,86],"associated":[49],"together":[51],"with":[52,69,117],"contextual":[53],"about":[57],"system's":[58],"constraints.":[59],"In":[60],"paper":[62],"fusion":[67,135],"approach":[68,84],"penalized":[70],"matrix":[71],"tri-factorization":[72],"(DFMF)":[73],"simultaneously":[75],"factorizes":[76],"matrices":[78],"to":[79,139],"reveal":[80],"hidden":[81],"associations.":[82],"The":[83],"consider":[87],"any":[88,153],"expressed":[93],"matrix,":[96],"including":[97],"those":[98],"feature-based":[100],"representations,":[101],"ontologies,":[102],"associations":[103],"networks.":[105],"We":[106],"demonstrate":[107],"utility":[109],"DFMF":[111],"for":[112,123],"gene":[113],"function":[114],"prediction":[115,124],"task":[116],"eleven":[118],"different":[119],"sources":[121],"pharmacologic":[126],"actions":[127],"fusing":[129],"six":[130],"sources.":[132],"Our":[133],"algorithm":[136],"compares":[137],"favorably":[138],"alternative":[140],"integration":[142],"approaches":[143],"achieves":[145],"higher":[146],"accuracy":[147],"than":[148],"obtained":[151],"single":[154],"source":[156],"alone.":[157]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":46},{"year":2020,"cited_by_count":26},{"year":2019,"cited_by_count":30},{"year":2018,"cited_by_count":28},{"year":2017,"cited_by_count":15},{"year":2016,"cited_by_count":14},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":1}],"updated_date":"2026-08-05T07:39:15.569665","created_date":"2025-10-10T00:00:00"}
