{"id":"https://openalex.org/W2067286087","doi":"https://doi.org/10.1109/tcbb.2007.1053","title":"Typing Staphylococcus aureus Using the spa Gene and Novel Distance Measures","display_name":"Typing Staphylococcus aureus Using the spa Gene and Novel Distance Measures","publication_year":2007,"publication_date":"2007-10-01","ids":{"openalex":"https://openalex.org/W2067286087","doi":"https://doi.org/10.1109/tcbb.2007.1053","mag":"2067286087","pmid":"https://pubmed.ncbi.nlm.nih.gov/17975279"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2007.1053","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2007.1053","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062472063","display_name":"Phaedra Agius","orcid":"https://orcid.org/0000-0002-1688-992X"},"institutions":[{"id":"https://openalex.org/I36234482","display_name":"University of Bristol","ror":"https://ror.org/0524sp257","country_code":"GB","type":"education","lineage":["https://openalex.org/I36234482"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"P. Agius","raw_affiliation_strings":["Engineering Mathematics, Bristol University, Bristol, UK","Bristol UNiv., Bristol"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Engineering Mathematics, Bristol University, Bristol, UK","institution_ids":["https://openalex.org/I36234482"]},{"raw_affiliation_string":"Bristol UNiv., Bristol","institution_ids":["https://openalex.org/I36234482"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044485195","display_name":"Barry N. Kreiswirth","orcid":"https://orcid.org/0000-0002-0243-131X"},"institutions":[{"id":"https://openalex.org/I147288966","display_name":"International Center for Public Health","ror":"https://ror.org/01z8t1s57","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I147288966"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B.N. Kreiswirth","raw_affiliation_strings":["Public Health Research Institute, Newark, NJ, USA","[Public Health Research Institute, Newark, NJ, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Health Research Institute, Newark, NJ, USA","institution_ids":[]},{"raw_affiliation_string":"[Public Health Research Institute, Newark, NJ, USA]","institution_ids":["https://openalex.org/I147288966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015901360","display_name":"Steven Naidich","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091065","display_name":"Noom (United States)","ror":"https://ror.org/00ap23p40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210091065"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Naidich","raw_affiliation_strings":["EGenomics, Inc., New York, NY, USA","[EGenomics, Inc., New York, NY, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EGenomics, Inc., New York, NY, USA","institution_ids":["https://openalex.org/I4210091065"]},{"raw_affiliation_string":"[EGenomics, Inc., New York, NY, USA]","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048876983","display_name":"Kristin P. Bennett","orcid":"https://orcid.org/0000-0002-8782-105X"},"institutions":[{"id":"https://openalex.org/I165799507","display_name":"Rensselaer Polytechnic Institute","ror":"https://ror.org/01rtyzb94","country_code":"US","type":"education","lineage":["https://openalex.org/I165799507"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K.P. Bennett","raw_affiliation_strings":["Department of Mathematical Science, Rensselaer Polytechnic Institute, Troy, NY, USA","[Department of Mathematical Sci, Rensselaer Polytechnic Institute, Troy, NY, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematical Science, Rensselaer Polytechnic Institute, Troy, NY, USA","institution_ids":["https://openalex.org/I165799507"]},{"raw_affiliation_string":"[Department of Mathematical Sci, Rensselaer Polytechnic Institute, Troy, NY, USA]","institution_ids":["https://openalex.org/I165799507"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9317,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.72820962,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"4","issue":"4","first_page":"693","last_page":"704"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10195","display_name":"Antimicrobial Resistance in Staphylococcus","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10195","display_name":"Antimicrobial Resistance in Staphylococcus","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multilocus-sequence-typing","display_name":"Multilocus sequence typing","score":0.9588062763214111},{"id":"https://openalex.org/keywords/typing","display_name":"Typing","score":0.7459176182746887},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5748316049575806},{"id":"https://openalex.org/keywords/locus","display_name":"Locus (genetics)","score":0.5075870752334595},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48960739374160767},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4692007899284363},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4657628834247589},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4504280686378479},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4427642822265625},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.4379866421222687},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.4132075309753418},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32270586490631104},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3059688210487366},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27352434396743774},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.26845964789390564}],"concepts":[{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.9588062763214111},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.7459176182746887},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5748316049575806},{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.5075870752334595},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48960739374160767},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4692007899284363},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4657628834247589},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4504280686378479},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4427642822265625},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.4379866421222687},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.4132075309753418},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32270586490631104},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3059688210487366},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27352434396743774},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.26845964789390564},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015373","descriptor_name":"Bacterial Typing Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017720","descriptor_name":"Molecular Epidemiology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017720","descriptor_name":"Molecular Epidemiology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017720","descriptor_name":"Molecular Epidemiology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2007.1053","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2007.1053","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17975279","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17975279","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.6800000071525574,"display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1510073064","https://openalex.org/W1527353036","https://openalex.org/W1582937231","https://openalex.org/W1983265703","https://openalex.org/W2013502943","https://openalex.org/W2074231493","https://openalex.org/W2104411795","https://openalex.org/W2104416613","https://openalex.org/W2115991524","https://openalex.org/W2125211897","https://openalex.org/W2134606926","https://openalex.org/W2142503351","https://openalex.org/W2147834333","https://openalex.org/W2149652290","https://openalex.org/W2159308620","https://openalex.org/W2170960297","https://openalex.org/W2398756509","https://openalex.org/W2398868417","https://openalex.org/W3144379435","https://openalex.org/W6634985699"],"related_works":["https://openalex.org/W2941777425","https://openalex.org/W2771955576","https://openalex.org/W2023410356","https://openalex.org/W4211050334","https://openalex.org/W1984563346","https://openalex.org/W1967917710","https://openalex.org/W4210384666","https://openalex.org/W2002948709","https://openalex.org/W3184364899","https://openalex.org/W1982973235"],"abstract_inverted_index":{"We":[0,82],"developed":[1],"an":[2],"approach":[3,51,193],"for":[4,92],"identifying":[5,161],"groups":[6,121],"or":[7],"families":[8],"of":[9,20,62,144,176],"Staphylococcus":[10],"aureus":[11,25],"bacteria":[12],"based":[13],"on":[14],"genotype":[15],"data.":[16],"With":[17],"the":[18,33,63,72,74,84,93,103,120,124,165,182],"emergence":[19],"drug":[21],"resistant":[22],"strains,":[23],"S.":[24],"represents":[26],"a":[27,47,88,173,190],"significant":[28],"human":[29],"health":[30],"threat.":[31],"Identifying":[32],"family":[34],"types":[35,140],"efficiently":[36],"and":[37,100,107],"quickly":[38],"is":[39,80,134],"crucial":[40],"in":[41],"community":[42],"settings.":[43],"Here,":[44],"we":[45,66,171],"develop":[46],"hybrid":[48],"sequence":[49,64,85,95,128],"algorithm":[50,91],"to":[52,136,155,180,194],"type":[53],"this":[54],"bacterium":[55],"using":[56],"only":[57],"its":[58],"spa":[59,94,115,149],"gene.":[60],"Two":[61],"algorithms":[65,86],"used":[67,108],"are":[68],"well":[69],"established,":[70],"while":[71],"third,":[73],"Best":[75],"Common":[76],"Gap-Weighted":[77],"Sequence":[78],"(BCGS),":[79],"novel.":[81],"combined":[83],"with":[87,119],"weighted":[89],"match/mismatch":[90],"ends.":[96],"Normalized":[97],"similarity":[98],"scores":[99],"distances":[101],"between":[102,184],"sequences":[104],"were":[105],"derived":[106],"within":[109],"unsupervised":[110],"clustering":[111,150],"methods.":[112],"The":[113,186],"resulting":[114],"groupings":[116],"correlated":[117],"strongly":[118],"defined":[122],"by":[123],"well-established":[125],"Multi":[126],"locus":[127],"typing":[129,133,138],"(MLST)":[130],"method.":[131],"Spa":[132],"preferable":[135],"MLST":[137,166],"which":[139],"seven":[141],"genes":[142],"instead":[143],"just":[145],"one.":[146],"Furthermore,":[147],"our":[148,177],"methods":[151],"can":[152],"be":[153,156],"fine-tuned":[154],"more":[157],"discriminative":[158],"than":[159],"MLST,":[160],"new":[162,192],"strains":[163],"that":[164],"method":[167],"may":[168],"not.":[169],"Finally,":[170],"performed":[172],"multidimensional":[174],"scaling":[175],"distance":[178],"matrices":[179],"visualize":[181],"relationship":[183],"isolates.":[185],"proposed":[187],"methodology":[188],"provides":[189],"promising":[191],"molecular":[195],"epidemiology.":[196]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}