{"id":"https://openalex.org/W2064359126","doi":"https://doi.org/10.1109/msr.2013.6624024","title":"A preliminary investigation of using age and distance measures in the detection of evolutionary couplings","display_name":"A preliminary investigation of using age and distance measures in the detection of evolutionary couplings","publication_year":2013,"publication_date":"2013-05-01","ids":{"openalex":"https://openalex.org/W2064359126","doi":"https://doi.org/10.1109/msr.2013.6624024","mag":"2064359126"},"language":"en","primary_location":{"id":"doi:10.1109/msr.2013.6624024","is_oa":false,"landing_page_url":"https://doi.org/10.1109/msr.2013.6624024","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 10th Working Conference on Mining Software Repositories (MSR)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060794279","display_name":"Abdulkareem Alali","orcid":null},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abdulkareem Alali","raw_affiliation_strings":["Department of Computer Science, Kent State University, Kent, OH, USA","Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kent State University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083973935","display_name":"Brian Bartman","orcid":null},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian Bartman","raw_affiliation_strings":["Department of Computer Science, Kent State University, Kent, OH, USA","Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kent State University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025493324","display_name":"Christian D. Newman","orcid":"https://orcid.org/0000-0002-8838-4074"},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christian D. Newman","raw_affiliation_strings":["Department of Computer Science, Kent State University, Kent, OH, USA","Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kent State University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021222755","display_name":"Jonathan I. Maletic","orcid":"https://orcid.org/0000-0001-5289-135X"},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan I. Maletic","raw_affiliation_strings":["Department of Computer Science, Kent State University, Kent, OH, USA","Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kent State University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Kent State Univ. Kent, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I149910238"],"apc_list":null,"apc_paid":null,"fwci":2.2881,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.89732967,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"169","last_page":"172"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.946399986743927,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.942799985408783,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.6399176120758057},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6253328323364258},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.5684275031089783},{"id":"https://openalex.org/keywords/coupling","display_name":"Coupling (piping)","score":0.547342836856842},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5150015354156494},{"id":"https://openalex.org/keywords/evolutionary-computation","display_name":"Evolutionary computation","score":0.48935097455978394},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4420495629310608},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3252764642238617},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09361758828163147}],"concepts":[{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.6399176120758057},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6253328323364258},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.5684275031089783},{"id":"https://openalex.org/C131584629","wikidata":"https://www.wikidata.org/wiki/Q4308705","display_name":"Coupling (piping)","level":2,"score":0.547342836856842},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5150015354156494},{"id":"https://openalex.org/C105902424","wikidata":"https://www.wikidata.org/wiki/Q1197129","display_name":"Evolutionary computation","level":2,"score":0.48935097455978394},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4420495629310608},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3252764642238617},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09361758828163147},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/msr.2013.6624024","is_oa":false,"landing_page_url":"https://doi.org/10.1109/msr.2013.6624024","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 10th Working Conference on Mining Software Repositories (MSR)","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.299.6427","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.299.6427","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.kent.edu/~jmaletic/papers/MSR13.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1484413656","https://openalex.org/W1506285740","https://openalex.org/W1533432827","https://openalex.org/W1575900732","https://openalex.org/W1677598599","https://openalex.org/W1994360381","https://openalex.org/W2041620226","https://openalex.org/W2100849134","https://openalex.org/W2104660782","https://openalex.org/W2106366577","https://openalex.org/W2111303489","https://openalex.org/W2117488430","https://openalex.org/W2126166995","https://openalex.org/W2127045627","https://openalex.org/W2133961160","https://openalex.org/W2141558501","https://openalex.org/W2142776215","https://openalex.org/W2161226419","https://openalex.org/W4233240690","https://openalex.org/W4236713380","https://openalex.org/W6630198464","https://openalex.org/W6660888303","https://openalex.org/W6678887739"],"related_works":["https://openalex.org/W4297582752","https://openalex.org/W4285805405","https://openalex.org/W2391924736","https://openalex.org/W3133779647","https://openalex.org/W1560122427","https://openalex.org/W2021957875","https://openalex.org/W2802808995","https://openalex.org/W2787833928","https://openalex.org/W2593449396","https://openalex.org/W2780789525"],"abstract_inverted_index":{"An":[0],"initial":[1],"study":[2],"of":[3,11,25,55,63,83],"using":[4],"two":[5],"measures":[6,74],"to":[7,51,79],"improve":[8,80],"the":[9,23,29,41,53,77,81],"accuracy":[10],"evolutionary":[12,46,85],"couplings":[13],"uncovered":[14],"from":[15],"version":[16],"history":[17],"is":[18,50],"presented.":[19],"Two":[20],"measures,":[21],"namely":[22],"age":[24],"a":[26,34],"pattern":[27],"and":[28,38],"distance":[30],"among":[31],"items":[32],"within":[33],"pattern,":[35],"are":[36,67],"defined":[37],"used":[39],"with":[40],"traditional":[42],"methods":[43],"for":[44],"computing":[45,84],"couplings.":[47,86],"The":[48],"goal":[49],"reduce":[52],"number":[54],"false":[56],"positives":[57],"(i.e.,":[58],"inaccurate":[59],"or":[60],"irrelevant":[61],"claims":[62],"coupling).":[64],"Initial":[65],"observations":[66],"presented":[68],"that":[69,72],"lend":[70],"evidence":[71],"these":[73],"may":[75],"have":[76],"potential":[78],"results":[82]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
