{"id":"https://openalex.org/W3043961832","doi":"https://doi.org/10.1109/iwssip48289.2020.9145086","title":"Taxonomic Indexes for Automatic Prostate Segmentation on 3D MRI Scans Using Superpixels and Probabilistic Atlas","display_name":"Taxonomic Indexes for Automatic Prostate Segmentation on 3D MRI Scans Using Superpixels and Probabilistic Atlas","publication_year":2020,"publication_date":"2020-07-01","ids":{"openalex":"https://openalex.org/W3043961832","doi":"https://doi.org/10.1109/iwssip48289.2020.9145086","mag":"3043961832"},"language":"en","primary_location":{"id":"doi:10.1109/iwssip48289.2020.9145086","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwssip48289.2020.9145086","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 International Conference on Systems, Signals and Image Processing (IWSSIP)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036382957","display_name":"Jo\u00e3o Vitor Ferreira Fran\u00e7a","orcid":null},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Joao Vitor Ferreira Franca","raw_affiliation_strings":["Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025538986","display_name":"Giovanni L. F. da Silva","orcid":"https://orcid.org/0000-0001-6370-939X"},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Giovanni Lucca Franca da Silva","raw_affiliation_strings":["Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103167691","display_name":"Pedro Santos","orcid":"https://orcid.org/0000-0002-4269-5838"},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Pedro Thiago Cutrim dos Santos","raw_affiliation_strings":["Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006289694","display_name":"Geraldo Br\u00e1z","orcid":"https://orcid.org/0000-0003-3731-6431"},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Geraldo Braz Junior","raw_affiliation_strings":["Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057598901","display_name":"Arist\u00f3fanes Corr\u00eaa Silva","orcid":"https://orcid.org/0000-0003-0423-2514"},"institutions":[{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Aristofanes Correa Silva","raw_affiliation_strings":["Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"Federal University of Maranh\u00e3o - UFMA, Applied Computing Group - NCA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I47327664"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000313139","display_name":"Elton Anderson Araujo de Cavalcanti","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127746","display_name":"Hospital Universit\u00e1rio da Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/03eve7z35","country_code":"BR","type":"healthcare","lineage":["https://openalex.org/I4210127746"]},{"id":"https://openalex.org/I47327664","display_name":"Universidade Federal do Maranh\u00e3o","ror":"https://ror.org/043fhe951","country_code":"BR","type":"education","lineage":["https://openalex.org/I47327664"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Elton Anderson Araujo de Cavalcanti","raw_affiliation_strings":["University Hospital of the Federal University of Maranh\u00e3o - HUUFMA, S\u00e3o Lu\u00eds, MA, Brazil"],"affiliations":[{"raw_affiliation_string":"University Hospital of the Federal University of Maranh\u00e3o - HUUFMA, S\u00e3o Lu\u00eds, MA, Brazil","institution_ids":["https://openalex.org/I4210127746","https://openalex.org/I47327664"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5036382957"],"corresponding_institution_ids":["https://openalex.org/I47327664"],"apc_list":null,"apc_paid":null,"fwci":0.0977,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.38702359,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"122","last_page":"127"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7267230749130249},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.701831579208374},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6895847320556641},{"id":"https://openalex.org/keywords/prostate","display_name":"Prostate","score":0.6529613733291626},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.6345309019088745},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5824536681175232},{"id":"https://openalex.org/keywords/s\u00f8rensen\u2013dice-coefficient","display_name":"S\u00f8rensen\u2013Dice coefficient","score":0.5498476624488831},{"id":"https://openalex.org/keywords/prostate-biopsy","display_name":"Prostate biopsy","score":0.5467530488967896},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.5151585340499878},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4802111089229584},{"id":"https://openalex.org/keywords/dice","display_name":"Dice","score":0.43826767802238464},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4017130136489868},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3691749572753906},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.19388514757156372},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14276698231697083},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.07629260420799255},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.07499757409095764}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7267230749130249},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.701831579208374},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6895847320556641},{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.6529613733291626},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.6345309019088745},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5824536681175232},{"id":"https://openalex.org/C163892561","wikidata":"https://www.wikidata.org/wiki/Q2613728","display_name":"S\u00f8rensen\u2013Dice coefficient","level":4,"score":0.5498476624488831},{"id":"https://openalex.org/C2781217009","wikidata":"https://www.wikidata.org/wiki/Q4086927","display_name":"Prostate biopsy","level":4,"score":0.5467530488967896},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.5151585340499878},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4802111089229584},{"id":"https://openalex.org/C22029948","wikidata":"https://www.wikidata.org/wiki/Q45089","display_name":"Dice","level":2,"score":0.43826767802238464},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4017130136489868},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3691749572753906},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.19388514757156372},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14276698231697083},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.07629260420799255},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.07499757409095764},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.0},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iwssip48289.2020.9145086","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwssip48289.2020.9145086","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 International Conference on Systems, Signals and Image Processing (IWSSIP)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.4699999988079071,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W565224490","https://openalex.org/W1521875821","https://openalex.org/W1585066973","https://openalex.org/W1910608723","https://openalex.org/W2001142427","https://openalex.org/W2028911404","https://openalex.org/W2062557036","https://openalex.org/W2070142954","https://openalex.org/W2109628725","https://openalex.org/W2148027243","https://openalex.org/W2150134853","https://openalex.org/W2295598076","https://openalex.org/W2295850614","https://openalex.org/W2327084999","https://openalex.org/W2411249141","https://openalex.org/W2566015103","https://openalex.org/W2586435489","https://openalex.org/W2602809673","https://openalex.org/W2604790786","https://openalex.org/W2748151168","https://openalex.org/W2762363380","https://openalex.org/W2787035960","https://openalex.org/W2803522971","https://openalex.org/W2911188335","https://openalex.org/W2914806156","https://openalex.org/W2915606070","https://openalex.org/W2958620810","https://openalex.org/W2964269453","https://openalex.org/W2978255468","https://openalex.org/W4297728746","https://openalex.org/W6715010075","https://openalex.org/W6736302784","https://openalex.org/W6765303622","https://openalex.org/W6803376173"],"related_works":["https://openalex.org/W3104750253","https://openalex.org/W4402926319","https://openalex.org/W4389060404","https://openalex.org/W2973136608","https://openalex.org/W3012828488","https://openalex.org/W4286233748","https://openalex.org/W4254054209","https://openalex.org/W4200334192","https://openalex.org/W2952835238","https://openalex.org/W2157102420"],"abstract_inverted_index":{"In":[0,103],"prostate":[1,67,83],"analysis":[2],"clinical":[3],"routine,":[4],"manual":[5],"and":[6,23,39,50,64,96,115,135],"semi-manual":[7],"techniques":[8],"are":[9,21,70],"used":[10],"to":[11,18,56,59,151],"interpret":[12],"MRI":[13,87],"scans,":[14],"which":[15],"in":[16],"addition":[17],"being":[19],"subjective,":[20],"time-consuming":[22],"operator-dependent.":[24],"Prostate":[25,113],"segmentation":[26,44,84],"is":[27,54],"necessary":[28],"for":[29,48,82],"the":[30,60,97,105,112,143,147],"diagnosis":[31],"of":[32,123,127,130,133,138,146],"a":[33,119],"possible":[34],"tumor,":[35],"biopsy,":[36],"staging,":[37],"monitoring":[38],"treatment.":[40],"Thus,":[41],"an":[42,79,136],"automatic":[43,80],"can":[45],"be":[46],"crucial":[47],"fast":[49],"reliable":[51],"diagnosis,":[52],"but":[53],"challenging":[55],"accomplish":[57],"due":[58],"varying":[61],"sizes,":[62],"shapes":[63],"also":[65],"unclear":[66],"boundaries":[68],"that":[69],"blended":[71],"with":[72],"surrounding":[73],"tissues.":[74],"Thereupon,":[75],"this":[76],"work":[77],"proposes":[78],"method":[81,107,149],"on":[85,90,111],"3D":[86],"scans":[88],"based":[89],"superpixels,":[91],"taxonomic":[92],"indexes,":[93],"probabilistic":[94],"atlas":[95],"extreme":[98],"gradient":[99],"boosting":[100],"algorithm":[101],"(XGBoost).":[102],"addition,":[104],"proposed":[106,148],"has":[108],"been":[109],"evaluated":[110],"3T":[114],"PROMISE12":[116],"databases,":[117],"presenting":[118],"dice":[120],"similarity":[121,126],"coefficient":[122],"84.03%,":[124],"volumetric":[125],"95.42%,":[128],"recall":[129],"88.11%,":[131],"specificity":[132],"90.82%,":[134],"accuracy":[137],"90.06%.":[139],"Experimental":[140],"results":[141],"demonstrate":[142],"high":[144],"potential":[145],"comparable":[150],"those":[152],"previously":[153],"published.":[154]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
