{"id":"https://openalex.org/W7092492344","doi":"https://doi.org/10.1109/isit63088.2025.11195553","title":"Coding for Ordered Composite DNA Sequences","display_name":"Coding for Ordered Composite DNA Sequences","publication_year":2025,"publication_date":"2025-06-22","ids":{"openalex":"https://openalex.org/W7092492344","doi":"https://doi.org/10.1109/isit63088.2025.11195553"},"language":null,"primary_location":{"id":"doi:10.1109/isit63088.2025.11195553","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isit63088.2025.11195553","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Symposium on Information Theory (ISIT)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Besart Dollma","orcid":null},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Besart Dollma","raw_affiliation_strings":["Technion - Israel Institute of Technology,Faculty of Computer Science,Israel"],"affiliations":[{"raw_affiliation_string":"Technion - Israel Institute of Technology,Faculty of Computer Science,Israel","institution_ids":["https://openalex.org/I174306211"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Ohad Elishco","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Ohad Elishco","raw_affiliation_strings":["Ben-Gurion University of the Negev,Israel"],"affiliations":[{"raw_affiliation_string":"Ben-Gurion University of the Negev,Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"last","author":{"id":null,"display_name":"Eitan Yaakobi","orcid":null},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Eitan Yaakobi","raw_affiliation_strings":["Technion - Israel Institute of Technology,Faculty of Computer Science,Israel"],"affiliations":[{"raw_affiliation_string":"Technion - Israel Institute of Technology,Faculty of Computer Science,Israel","institution_ids":["https://openalex.org/I174306211"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I174306211"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.56693386,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/composite-number","display_name":"Composite number","score":0.6223999857902527},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.6215000152587891},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5705999732017517},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.44769999384880066},{"id":"https://openalex.org/keywords/complementary-sequences","display_name":"Complementary sequences","score":0.4255000054836273},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.41940000653266907},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.3928000032901764}],"concepts":[{"id":"https://openalex.org/C104779481","wikidata":"https://www.wikidata.org/wiki/Q50707","display_name":"Composite number","level":2,"score":0.6223999857902527},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.6215000152587891},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5705999732017517},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4855000078678131},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.44769999384880066},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44679999351501465},{"id":"https://openalex.org/C32795469","wikidata":"https://www.wikidata.org/wiki/Q5156430","display_name":"Complementary sequences","level":2,"score":0.4255000054836273},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.41940000653266907},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.3928000032901764},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3919000029563904},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.373199999332428},{"id":"https://openalex.org/C77553402","wikidata":"https://www.wikidata.org/wiki/Q13222579","display_name":"Upper and lower bounds","level":2,"score":0.34929999709129333},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3100999891757965},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.30480000376701355},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.29330000281333923},{"id":"https://openalex.org/C191961535","wikidata":"https://www.wikidata.org/wiki/Q2360205","display_name":"A-DNA","level":3,"score":0.28839999437332153},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.2840999960899353},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2759999930858612},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.27549999952316284},{"id":"https://openalex.org/C60603091","wikidata":"https://www.wikidata.org/wiki/Q2981616","display_name":"Variable-length code","level":3,"score":0.2743000090122223},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.26899999380111694},{"id":"https://openalex.org/C52622258","wikidata":"https://www.wikidata.org/wiki/Q131222","display_name":"Information theory","level":2,"score":0.25780001282691956},{"id":"https://openalex.org/C63435697","wikidata":"https://www.wikidata.org/wiki/Q864135","display_name":"Binary code","level":3,"score":0.25099998712539673}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isit63088.2025.11195553","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isit63088.2025.11195553","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Symposium on Information Theory (ISIT)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W2025383314","https://openalex.org/W2026251282","https://openalex.org/W2109243615","https://openalex.org/W2127236769","https://openalex.org/W2162980030","https://openalex.org/W2302781903","https://openalex.org/W2942635499","https://openalex.org/W2972936807","https://openalex.org/W3093968171","https://openalex.org/W3186546642","https://openalex.org/W4290996379","https://openalex.org/W4393497334","https://openalex.org/W4399207509","https://openalex.org/W4401693833"],"related_works":[],"abstract_inverted_index":{"To":[0],"increase":[1],"the":[2,33],"information":[3],"capacity":[4],"of":[5,35,50],"DNA":[6,9,20],"storage,":[7],"composite":[8,19,23,37],"letters":[10],"were":[11],"introduced.":[12],"We":[13,31,46],"propose":[14],"a":[15],"channel":[16],"model":[17],"for":[18],"in":[21,43],"which":[22],"sequences":[24,39],"are":[25],"decomposed":[26],"into":[27],"ordered":[28],"non-composite":[29],"sequences.":[30],"study":[32],"problem":[34],"reconstructing":[36],"binary":[38],"with":[40],"substitution":[41],"errors":[42],"this":[44],"channel.":[45],"define":[47],"two":[48],"families":[49],"error-correcting":[51],"codes":[52],"and":[53,56],"provide":[54],"lower":[55],"upper":[57],"bounds":[58],"on":[59],"their":[60],"cardinality.":[61]},"counts_by_year":[],"updated_date":"2026-02-23T20:09:44.859080","created_date":"2025-10-21T00:00:00"}
