{"id":"https://openalex.org/W2071511818","doi":"https://doi.org/10.1109/isb.2012.6314150","title":"A new method to identify repositioned drugs for prostate cancer","display_name":"A new method to identify repositioned drugs for prostate cancer","publication_year":2012,"publication_date":"2012-08-01","ids":{"openalex":"https://openalex.org/W2071511818","doi":"https://doi.org/10.1109/isb.2012.6314150","mag":"2071511818"},"language":"en","primary_location":{"id":"doi:10.1109/isb.2012.6314150","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isb.2012.6314150","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 6th International Conference on Systems Biology (ISB)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070185505","display_name":"Zikai Wu","orcid":"https://orcid.org/0000-0002-7295-8053"},"institutions":[{"id":"https://openalex.org/I148128674","display_name":"University of Shanghai for Science and Technology","ror":"https://ror.org/00ay9v204","country_code":"CN","type":"education","lineage":["https://openalex.org/I148128674"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zikai Wu","raw_affiliation_strings":["Business School, University of shanghai for Science and Technology, Shanghai, China","Business School, University of shanghai for Science and Technology, 200093 China"],"affiliations":[{"raw_affiliation_string":"Business School, University of shanghai for Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I148128674"]},{"raw_affiliation_string":"Business School, University of shanghai for Science and Technology, 200093 China","institution_ids":["https://openalex.org/I148128674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115599758","display_name":"Yong Wang","orcid":"https://orcid.org/0000-0003-0695-5273"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210120485","display_name":"Academy of Mathematics and Systems Science","ror":"https://ror.org/02jkmyk67","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120485"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yong Wang","raw_affiliation_strings":["Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China","Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China"],"affiliations":[{"raw_affiliation_string":"Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210120485","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China","institution_ids":["https://openalex.org/I4210120485","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012283696","display_name":"Luonan Chen","orcid":"https://orcid.org/0000-0002-3960-0068"},"institutions":[{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Luonan Chen","raw_affiliation_strings":["Key Laboratory of Systems Biology Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China","Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200031 China"],"affiliations":[{"raw_affiliation_string":"Key Laboratory of Systems Biology Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200031 China","institution_ids":["https://openalex.org/I19820366"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5070185505"],"corresponding_institution_ids":["https://openalex.org/I148128674"],"apc_list":null,"apc_paid":null,"fwci":1.6848,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.84429191,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"280","last_page":"284"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/jaccard-index","display_name":"Jaccard index","score":0.8553720712661743},{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.6561076045036316},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.5463855266571045},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.4982144832611084},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4410881996154785},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3906708359718323},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.38138383626937866},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3621261715888977},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.2986369729042053},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2026878297328949},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.1495618224143982},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.13905978202819824}],"concepts":[{"id":"https://openalex.org/C203519979","wikidata":"https://www.wikidata.org/wiki/Q865360","display_name":"Jaccard index","level":3,"score":0.8553720712661743},{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.6561076045036316},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.5463855266571045},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.4982144832611084},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4410881996154785},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3906708359718323},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.38138383626937866},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3621261715888977},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.2986369729042053},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2026878297328949},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.1495618224143982},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.13905978202819824},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isb.2012.6314150","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isb.2012.6314150","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE 6th International Conference on Systems Biology (ISB)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7799999713897705,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1505823450","https://openalex.org/W1966446944","https://openalex.org/W1970263201","https://openalex.org/W1979924529","https://openalex.org/W2017239599","https://openalex.org/W2020132970","https://openalex.org/W2037022423","https://openalex.org/W2061016350","https://openalex.org/W2074192927","https://openalex.org/W2076764146","https://openalex.org/W2081098333","https://openalex.org/W2094791588","https://openalex.org/W2106966651","https://openalex.org/W2113072832","https://openalex.org/W2113588951","https://openalex.org/W2121604817","https://openalex.org/W2137632714","https://openalex.org/W2138512826","https://openalex.org/W2143251418","https://openalex.org/W2144866553","https://openalex.org/W2147706313","https://openalex.org/W2156345326","https://openalex.org/W2167980479","https://openalex.org/W2759567918","https://openalex.org/W6681119262"],"related_works":["https://openalex.org/W4254879869","https://openalex.org/W3022576529","https://openalex.org/W2628526247","https://openalex.org/W2596401011","https://openalex.org/W2913569734","https://openalex.org/W4401519790","https://openalex.org/W2702570413","https://openalex.org/W2399140686","https://openalex.org/W1980001478","https://openalex.org/W3166711969"],"abstract_inverted_index":{"With":[0],"the":[1,34,43,49,53,104,112,116,133,158,199,204],"merits":[2],"of":[3,36,42,48,55,81,115,203],"faster":[4],"development":[5],"time":[6],"and":[7,18,63,70,94,124,145,163,201],"reduced":[8],"risk,":[9],"identifying":[10,103],"new":[11,89,100,205],"indications":[12,27],"for":[13,46,102,195],"marketed":[14],"drugs":[15,24,106,194],"draws":[16],"more":[17,19],"attention.":[20],"In":[21,84,130],"particular,":[22],"repositioning":[23,193],"with":[25,87,185],"known":[26],"has":[28],"become":[29],"an":[30],"hot":[31],"topic":[32],"in":[33,79,142],"area":[35],"computational":[37],"systems":[38],"biology.":[39],"However,":[40],"one":[41],"common":[44],"shortcomings":[45],"most":[47,80],"previous":[50],"methods":[51],"is":[52],"ignorance":[54],"side":[56,95,180],"effect,":[57,96,181],"i.e.,":[58],"drug":[59,146,171],"through":[60],"primary":[61],"targets":[62,65],"off":[64],"might":[66],"induce":[67],"both":[68,92],"desired":[69],"unintended":[71],"effects":[72],"respectively,":[73],"which":[74,182],"could":[75],"not":[76],"appropriately":[77],"evaluated":[78],"existing":[82],"methods.":[83],"this":[85,131],"paper":[86],"a":[88,99,186],"measure":[90],"considering":[91],"efficacy":[93,156],"we":[97],"developed":[98],"method":[101],"repositioned":[105],"against":[107],"prostate":[108,121,196],"cancer":[109,122,197],"by":[110,127,151,175],"evaluating":[111],"mutual":[113],"relations":[114],"gene":[117,136],"expression":[118],"levels":[119],"between":[120,135,160],"samples":[123],"those":[125],"induced":[126],"bioactive":[128],"compounds.":[129],"measure,":[132],"overlap":[134,159],"sets":[137],"that":[138],"were":[139,183],"oppositely":[140],"regulated":[141,168],"disease":[143],"state":[144,148],"treatment":[147],"was":[149,173],"quantified":[150,174],"jaccard":[152,176],"index":[153,177],"as":[154,178],"drug's":[155,179],"while":[157],"essential":[161],"genes":[162,166],"positively":[164],"correlated":[165],"(or":[167],"just":[169],"after":[170],"treatment)":[172],"balanced":[184],"parameter":[187],"\u03bb.":[188],"The":[189],"preliminary":[190],"results":[191],"on":[192],"verify":[198],"effectiveness":[200],"efficiency":[202],"method.":[206]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
