{"id":"https://openalex.org/W2128901732","doi":"https://doi.org/10.1109/icarcv.2008.4795726","title":"Modeling diurnal rhythms with an array of phase dynamic oscillators","display_name":"Modeling diurnal rhythms with an array of phase dynamic oscillators","publication_year":2008,"publication_date":"2008-12-01","ids":{"openalex":"https://openalex.org/W2128901732","doi":"https://doi.org/10.1109/icarcv.2008.4795726","mag":"2128901732"},"language":"en","primary_location":{"id":"doi:10.1109/icarcv.2008.4795726","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icarcv.2008.4795726","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 10th International Conference on Control, Automation, Robotics and Vision","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115695520","display_name":"Wenxue Wang","orcid":"https://orcid.org/0000-0002-9137-8302"},"institutions":[{"id":"https://openalex.org/I12315562","display_name":"Texas Tech University","ror":"https://ror.org/0405mnx93","country_code":"US","type":"education","lineage":["https://openalex.org/I12315562"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Wenxue Wang","raw_affiliation_strings":["Department of Mathematics and Statistics, Texas Tech University, Lubbock, TX, USA","Dept. of Math. & Stat., Texas Tech. Univ., Lubbock, TX#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Texas Tech University, Lubbock, TX, USA","institution_ids":["https://openalex.org/I12315562"]},{"raw_affiliation_string":"Dept. of Math. & Stat., Texas Tech. Univ., Lubbock, TX#TAB#","institution_ids":["https://openalex.org/I12315562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089441880","display_name":"Himadri B. Pakrasi","orcid":"https://orcid.org/0000-0001-8240-2123"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Himadri B. Pakrasi","raw_affiliation_strings":["Department of Biology, Washington University, Saint Louis, MO, USA","Dept. of Biol., Washington Univ., St. Louis, MO"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Washington University, Saint Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Dept. of Biol., Washington Univ., St. Louis, MO","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067851724","display_name":"Bijoy K. Ghosh","orcid":null},"institutions":[{"id":"https://openalex.org/I12315562","display_name":"Texas Tech University","ror":"https://ror.org/0405mnx93","country_code":"US","type":"education","lineage":["https://openalex.org/I12315562"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bijoy K. Ghosh","raw_affiliation_strings":["Department of Mathematics and Statistics, Texas Tech University, Lubbock, TX, USA","Dept. of Math. & Stat., Texas Tech. Univ., Lubbock, TX#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Statistics, Texas Tech University, Lubbock, TX, USA","institution_ids":["https://openalex.org/I12315562"]},{"raw_affiliation_string":"Dept. of Math. & Stat., Texas Tech. Univ., Lubbock, TX#TAB#","institution_ids":["https://openalex.org/I12315562"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5115695520"],"corresponding_institution_ids":["https://openalex.org/I12315562"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.14566156,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"58","issue":null,"first_page":"1391","last_page":"1396"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10342","display_name":"Circadian rhythm and melatonin","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2807","display_name":"Endocrine and Autonomic Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10342","display_name":"Circadian rhythm and melatonin","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2807","display_name":"Endocrine and Autonomic Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12005","display_name":"Spaceflight effects on biology","score":0.9775000214576721,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12236","display_name":"Photoreceptor and optogenetics research","score":0.9696000218391418,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rhythm","display_name":"Rhythm","score":0.5686027407646179},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47375187277793884},{"id":"https://openalex.org/keywords/phase","display_name":"Phase (matter)","score":0.4705517590045929},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.24870896339416504},{"id":"https://openalex.org/keywords/acoustics","display_name":"Acoustics","score":0.15311312675476074}],"concepts":[{"id":"https://openalex.org/C135343436","wikidata":"https://www.wikidata.org/wiki/Q170406","display_name":"Rhythm","level":2,"score":0.5686027407646179},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47375187277793884},{"id":"https://openalex.org/C44280652","wikidata":"https://www.wikidata.org/wiki/Q104837","display_name":"Phase (matter)","level":2,"score":0.4705517590045929},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.24870896339416504},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.15311312675476074},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/icarcv.2008.4795726","is_oa":false,"landing_page_url":"https://doi.org/10.1109/icarcv.2008.4795726","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 10th International Conference on Control, Automation, Robotics and Vision","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W111157985","https://openalex.org/W1276039449","https://openalex.org/W1968325951","https://openalex.org/W1979723177","https://openalex.org/W1991123854","https://openalex.org/W2026433986","https://openalex.org/W2038763999","https://openalex.org/W2054585632","https://openalex.org/W2064735165","https://openalex.org/W2083971370","https://openalex.org/W2088678566","https://openalex.org/W2122087821","https://openalex.org/W2127544305","https://openalex.org/W2132673430","https://openalex.org/W2133111499","https://openalex.org/W2135694744","https://openalex.org/W2146600670","https://openalex.org/W2164696529"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2072492413","https://openalex.org/W2997159972","https://openalex.org/W4296378967","https://openalex.org/W2064134577","https://openalex.org/W2373995729","https://openalex.org/W3203096336","https://openalex.org/W2157038729","https://openalex.org/W2393707162"],"abstract_inverted_index":{"Behavior":[0],"of":[1,22,69,109,135,142,149,161,226,247,255],"living":[2],"organisms":[3,70],"is":[4,60,79,96,154,177,196],"strongly":[5],"modulated":[6],"by":[7,10],"light":[8],"especially":[9,116],"the":[11,28,44,57,107,143,150,168,199,203,213,220,223,227,239,245,248,252,256,267,279,292],"day":[12],"and":[13,34,46,78,216,219,251,277],"night":[14],"cycle":[15],"giving":[16],"rise":[17],"to":[18,30,51,75,97,156,172,179,185,233,238,274,289],"a":[19,25,36,61,66,103,123,130,133,158,181,186,235,260,264],"cyclic":[20,54],"pattern":[21,26],"activities.":[23],"Such":[24],"helps":[27],"organism":[29],"coordinate":[31],"their":[32],"activities":[33],"maintain":[35,157,180],"balance":[37],"between":[38,164,212],"what":[39,47],"could":[40,48],"be":[41,49],"performed":[42],"during":[43],"\u2018day\u2019":[45],"relegated":[50],"\u2018night\u2019.":[52],"This":[53],"pattern,":[55],"called":[56],"\u2018Circadian":[58],"Rhythm\u2019,":[59],"biological":[62],"phenomenon":[63],"observed":[64,240],"in":[65,81,291],"large":[67],"number":[68],"ranging":[71],"from":[72,101],"unicellular":[73],"bacteria":[74],"human":[76],"beings":[77],"present":[80],"data":[82,100],"collected":[83],"at":[84],"various":[85],"levels":[86],"viz.":[87,209],"transcriptome,":[88],"proteome":[89],"etc.":[90],"In":[91,193],"this":[92],"paper,":[93],"our":[94],"goal":[95],"analyze":[98],"transcriptome":[99],"Cyanothece,":[102],"photosynthetic":[104],"cyanobacteria,":[105],"for":[106,118,139],"purpose":[108],"discovering":[110],"genes":[111],"whose":[112,282],"expressions":[113,242],"are":[114,170,231,285],"rhythmic,":[115],"those":[117],"which":[119],"these":[120],"rhythms":[121],"have":[122],"24":[124],"hours":[125,146],"cycle.":[126,147],"Subsequently":[127],"we":[128],"propose":[129],"model":[131,207,270],"with":[132,287],"network":[134,269],"three":[136,151],"phase":[137,152,159,182,229],"oscillators":[138,153,169,218,257],"each":[140,165],"one":[141],"twenty":[144],"four":[145],"Each":[148],"chosen":[155],"difference":[160],"120":[162],"degrees":[163],"other.":[166],"All":[167],"connected":[171],"an":[173],"internal":[174,204,249],"clock":[175,188,215,250],"that":[176,198],"designed":[178],"activity":[183],"close":[184,236],"master":[187,214],"derived":[189],"using":[190],"KaiC":[191,200],"proteins.":[192],"Cyanobacteria":[194],"it":[195],"believed":[197],"proteins":[201],"provide":[202,234],"rhythm.":[205],"The":[206],"parameters,":[208],"connection":[210],"strengths":[211],"peripheral":[217],"parameters":[221],"computing":[222],"linear":[224],"combinations":[225],"oscillator":[228,268,293],"variables,":[230],"optimized":[232],"match":[237],"gene":[241],"even":[243],"when":[244],"frequency":[246],"natural":[253],"frequencies":[254],"vary":[258],"within":[259],"certain":[261],"range.":[262],"As":[263],"final":[265],"step,":[266],"has":[271],"been":[272],"used":[273],"isolate":[275],"genes,":[276],"hence":[278],"associated":[280],"subprocesses,":[281],"expression":[283],"cycles":[284],"robust":[286],"respect":[288],"variations":[290],"frequencies.":[294]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}