{"id":"https://openalex.org/W4251740744","doi":"https://doi.org/10.1109/csb.2004.1332466","title":"Genetide - terra incognita discovery endeavor mining ests and expression data to elucidate known and de-novo genecards - genes","display_name":"Genetide - terra incognita discovery endeavor mining ests and expression data to elucidate known and de-novo genecards - genes","publication_year":2004,"publication_date":"2004-11-08","ids":{"openalex":"https://openalex.org/W4251740744","doi":"https://doi.org/10.1109/csb.2004.1332466"},"language":"en","primary_location":{"id":"doi:10.1109/csb.2004.1332466","is_oa":false,"landing_page_url":"https://doi.org/10.1109/csb.2004.1332466","pdf_url":null,"source":{"id":"https://openalex.org/S4363608884","display_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061150110","display_name":"M. Shklar","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"M. Shklar","raw_affiliation_strings":["Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001379588","display_name":"O. Shmueli","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"O. Shmueli","raw_affiliation_strings":["Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033951791","display_name":"Liora Z. Strichman-Almashanu","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"L. Strichman-Almashanu","raw_affiliation_strings":["Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066894945","display_name":"M. Shmoish","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"M. Shmoish","raw_affiliation_strings":["Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010856492","display_name":"D. Lancet","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"D. Lancet","raw_affiliation_strings":["Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086384510","display_name":"M. Safran","orcid":null},"institutions":[{"id":"https://openalex.org/I53964585","display_name":"Weizmann Institute of Science","ror":"https://ror.org/0316ej306","country_code":"IL","type":"education","lineage":["https://openalex.org/I53964585"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"M. Safran","raw_affiliation_strings":["Biological Services (Bioinformatics Unit), Weizmann Institute of Science, Rehovot, Israel"],"affiliations":[{"raw_affiliation_string":"Biological Services (Bioinformatics Unit), Weizmann Institute of Science, Rehovot, Israel","institution_ids":["https://openalex.org/I53964585"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5061150110"],"corresponding_institution_ids":["https://openalex.org/I53964585"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.73188406,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"458","last_page":"459"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12795","display_name":"Banana Cultivation and Research","score":0.6087999939918518,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12795","display_name":"Banana Cultivation and Research","score":0.6087999939918518,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12215","display_name":"Phytochemical Studies and Bioactivities","score":0.6080999970436096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.5296000242233276,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6778154373168945},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5581722259521484},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5544466376304626},{"id":"https://openalex.org/keywords/terra-incognita","display_name":"Terra incognita","score":0.5194084644317627},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4683099687099457},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.4496711194515228},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.44245675206184387},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3928876519203186},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34001871943473816},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.27932408452033997},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.27011436223983765},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2617175281047821},{"id":"https://openalex.org/keywords/meloidogyne-incognita","display_name":"Meloidogyne incognita","score":0.20034140348434448},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.05959296226501465}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6778154373168945},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5581722259521484},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5544466376304626},{"id":"https://openalex.org/C120804375","wikidata":"https://www.wikidata.org/wiki/Q587153","display_name":"Terra incognita","level":4,"score":0.5194084644317627},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4683099687099457},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.4496711194515228},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.44245675206184387},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3928876519203186},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34001871943473816},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27932408452033997},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.27011436223983765},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2617175281047821},{"id":"https://openalex.org/C2780617777","wikidata":"https://www.wikidata.org/wiki/Q628493","display_name":"Meloidogyne incognita","level":3,"score":0.20034140348434448},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.05959296226501465},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C2778830712","wikidata":"https://www.wikidata.org/wiki/Q5185","display_name":"Nematode","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/csb.2004.1332466","is_oa":false,"landing_page_url":"https://doi.org/10.1109/csb.2004.1332466","pdf_url":null,"source":{"id":"https://openalex.org/S4363608884","display_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1986891966","https://openalex.org/W2018643387","https://openalex.org/W2079031049","https://openalex.org/W2094448442","https://openalex.org/W2096525273","https://openalex.org/W2136145671","https://openalex.org/W2138974722","https://openalex.org/W2155708937","https://openalex.org/W2158209897","https://openalex.org/W2168783124"],"related_works":["https://openalex.org/W2059565715","https://openalex.org/W2901823680","https://openalex.org/W1999129612","https://openalex.org/W2116418175","https://openalex.org/W2009940763","https://openalex.org/W2126804125","https://openalex.org/W2946410450","https://openalex.org/W4361192415","https://openalex.org/W2137318037","https://openalex.org/W4386637333"],"abstract_inverted_index":{"The":[0,58],"construction":[1],"of":[2,33,38,75,109,122],"a":[3,70,80,117],"complete":[4],"EST-based":[5,84],"gene":[6,85],"index":[7],"is":[8,25,60],"an":[9],"intricate":[10],"task":[11],"yet":[12],"to":[13,29,98,111,132],"be":[14],"accomplished.":[15],"GeneTide,":[16],"the":[17,26,30,39,120],"Gene":[18],"Terra":[19],"Incognita":[20],"Discovery":[21],"Endeavor":[22],"(http://genecards.weizmann.ac.il/genetide/),":[23],"which":[24],"newest":[27],"addition":[28],"GeneCards":[31],"suite":[32],"databases,":[34],"comprehensively":[35],"maps":[36],">4.5":[37],"/spl":[40],"sim/5.5":[41],"million":[42],"human":[43,56],"ESTs":[44],"currently":[45],"available":[46],"at":[47],"dbEST":[48],"with":[49,92],"either":[50],"known":[51],"or":[52],"newly":[53],"defined":[54],"putative":[55],"genes.":[57,105],"association":[59],"accomplished":[61],"via":[62],"data":[63],"mining":[64],"genomic":[65],"resources,":[66],"and":[67],"integrating":[68],"using":[69],"unified":[71],"scoring":[72],"scheme.":[73],"Groups":[74],"unassociated":[76],"transcripts":[77],"serve":[78],"as":[79,102],"basis":[81],"for":[82],"defining":[83],"candidates":[86],"(EGCs).":[87],"These":[88],"EGCs":[89],"are":[90],"annotated":[91,123],"various":[93],"parameters,":[94],"including":[95],"expression":[96],"data,":[97],"determine":[99],"their":[100],"validity":[101],"possible":[103],"de-novo":[104],"An":[106],"immediate":[107],"application":[108],"GeneTide":[110],"microarray":[112],"annotation":[113],"has":[114],"increased,":[115],"in":[116,130],"specific":[118],"example,":[119],"number":[121],"Affymetrix":[124],"HGU95A-E":[125],"probe":[126],"sets":[127],"by":[128],"50%":[129],"comparison":[131],"previous":[133],"attempts.":[134]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}