{"id":"https://openalex.org/W2171695018","doi":"https://doi.org/10.1109/ccece.2009.5090101","title":"Segmentation of the effective area of images of renal biopsy samples","display_name":"Segmentation of the effective area of images of renal biopsy samples","publication_year":2009,"publication_date":"2009-05-01","ids":{"openalex":"https://openalex.org/W2171695018","doi":"https://doi.org/10.1109/ccece.2009.5090101","mag":"2171695018"},"language":"en","primary_location":{"id":"doi:10.1109/ccece.2009.5090101","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ccece.2009.5090101","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 Canadian Conference on Electrical and Computer Engineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060034742","display_name":"Sansira Seminowich","orcid":null},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Sansira Seminowich","raw_affiliation_strings":["Division of Transplantation, Department of Surgery, University of Calgary, Calgary, AB, Canada"],"affiliations":[{"raw_affiliation_string":"Division of Transplantation, Department of Surgery, University of Calgary, Calgary, AB, Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028388870","display_name":"Aylin Sar","orcid":null},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Aylin Sar","raw_affiliation_strings":["University of Calgary, Calgary, AB, CA"],"affiliations":[{"raw_affiliation_string":"University of Calgary, Calgary, AB, CA","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030123416","display_name":"Serdar Y\u0131lmaz","orcid":"https://orcid.org/0000-0002-4316-3737"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Serdar Yilmaz","raw_affiliation_strings":["Division of Transplantation, Department of Surgery, University of Calgary, Calgary, AB, Canada"],"affiliations":[{"raw_affiliation_string":"Division of Transplantation, Department of Surgery, University of Calgary, Calgary, AB, Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008235253","display_name":"Rangaraj M. Rangayyan","orcid":"https://orcid.org/0000-0002-6764-8691"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Rangaraj M. Rangayyan","raw_affiliation_strings":["Department of Electrical & Computer Engineering, Schulich School of Engineering, University of Calgary, Calgary, AB, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Electrical & Computer Engineering, Schulich School of Engineering, University of Calgary, Calgary, AB, Canada","institution_ids":["https://openalex.org/I168635309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060034742"],"corresponding_institution_ids":["https://openalex.org/I168635309"],"apc_list":null,"apc_paid":null,"fwci":0.2328,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.65538243,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"108","last_page":"111"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12067","display_name":"Renal and Vascular Pathologies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12067","display_name":"Renal and Vascular Pathologies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10373","display_name":"Renal Transplantation Outcomes and Treatments","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2747","display_name":"Transplantation"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11163","display_name":"Organ Donation and Transplantation","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biopsy","display_name":"Biopsy","score":0.7252141833305359},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6688162684440613},{"id":"https://openalex.org/keywords/closing","display_name":"Closing (real estate)","score":0.5904976725578308},{"id":"https://openalex.org/keywords/ground-truth","display_name":"Ground truth","score":0.5610506534576416},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5479169487953186},{"id":"https://openalex.org/keywords/medulla","display_name":"Medulla","score":0.5241665840148926},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.520765483379364},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.48073911666870117},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.46460622549057007},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.4186375141143799},{"id":"https://openalex.org/keywords/region-of-interest","display_name":"Region of interest","score":0.41482964158058167},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.37954074144363403},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.35783132910728455},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3189254105091095},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.22979116439819336},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.22833877801895142}],"concepts":[{"id":"https://openalex.org/C2775934546","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Biopsy","level":2,"score":0.7252141833305359},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6688162684440613},{"id":"https://openalex.org/C2778775528","wikidata":"https://www.wikidata.org/wiki/Q5135432","display_name":"Closing (real estate)","level":2,"score":0.5904976725578308},{"id":"https://openalex.org/C146849305","wikidata":"https://www.wikidata.org/wiki/Q370766","display_name":"Ground truth","level":2,"score":0.5610506534576416},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5479169487953186},{"id":"https://openalex.org/C17291353","wikidata":"https://www.wikidata.org/wiki/Q6807308","display_name":"Medulla","level":2,"score":0.5241665840148926},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.520765483379364},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.48073911666870117},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46460622549057007},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.4186375141143799},{"id":"https://openalex.org/C19609008","wikidata":"https://www.wikidata.org/wiki/Q2138203","display_name":"Region of interest","level":2,"score":0.41482964158058167},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.37954074144363403},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.35783132910728455},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3189254105091095},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.22979116439819336},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.22833877801895142},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ccece.2009.5090101","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ccece.2009.5090101","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 Canadian Conference on Electrical and Computer Engineering","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.4099999964237213}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1501210847","https://openalex.org/W1566835344","https://openalex.org/W2068836878","https://openalex.org/W2098773501","https://openalex.org/W2103404435","https://openalex.org/W2128488710","https://openalex.org/W2133059825","https://openalex.org/W2133956667","https://openalex.org/W2140072113","https://openalex.org/W2145933712","https://openalex.org/W2157840858","https://openalex.org/W4233602593"],"related_works":["https://openalex.org/W2517007886","https://openalex.org/W2383994331","https://openalex.org/W2116422677","https://openalex.org/W1522019333","https://openalex.org/W3121919567","https://openalex.org/W278047738","https://openalex.org/W2076369646","https://openalex.org/W2373884197","https://openalex.org/W4244817184","https://openalex.org/W2961923709"],"abstract_inverted_index":{"Diagnosis":[0],"and":[1,6,26,42,59,109],"monitoring":[2],"of":[3,13,20,36,47,86],"kidney":[4],"diseases":[5],"transplants":[7],"is":[8],"supported":[9],"by":[10,73],"microscopic":[11],"analysis":[12,21],"needle-core":[14],"biopsy":[15,39,49],"samples.":[16,50],"The":[17,51,62],"current":[18],"methods":[19,32,52],"allow":[22],"for":[23,33],"inconsistencies,":[24],"bias,":[25],"inaccuracies.":[27],"We":[28],"propose":[29],"image":[30],"processing":[31],"automatic":[34],"segmentation":[35],"the":[37,82,90,93,97,110],"effective":[38],"area":[40],"(cortex":[41],"medulla)":[43],"from":[44],"digital":[45],"images":[46,70],"renal":[48,76],"include":[53],"opening-by-reconstruction,":[54],"a":[55],"morphological":[56,60],"closing":[57],"operation,":[58],"erosion.":[61],"results":[63],"are":[64],"compared":[65],"to":[66,96],"100":[67],"randomly":[68],"selected":[69],"manually":[71],"marked":[72],"an":[74],"experienced":[75],"pathologist.":[77],"Comparative":[78],"measures":[79],"indicate":[80],"that":[81],"automatically":[83],"detected":[84],"region":[85],"interest":[87],"closely":[88],"matches":[89],"ground":[91],"truth;":[92],"mean":[94],"distance":[95],"closest":[98],"point":[99],"was":[100,113],"5.46":[101],"plusmn":[102,106,115],"3.92":[103],"mum":[104],"(6":[105],"4.31":[107],"pixels)":[108],"true-positive":[111],"fraction":[112],"98.25":[114],"1.77%.":[116]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
