{"id":"https://openalex.org/W2111350855","doi":"https://doi.org/10.1109/cbms.2009.5255413","title":"A grid problem solving environment for bioinformatics: The LIBI experience","display_name":"A grid problem solving environment for bioinformatics: The LIBI experience","publication_year":2009,"publication_date":"2009-08-01","ids":{"openalex":"https://openalex.org/W2111350855","doi":"https://doi.org/10.1109/cbms.2009.5255413","mag":"2111350855"},"language":"en","primary_location":{"id":"doi:10.1109/cbms.2009.5255413","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255413","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052404540","display_name":"Maria Mirto","orcid":"https://orcid.org/0000-0001-9366-3169"},"institutions":[{"id":"https://openalex.org/I142910587","display_name":"University of Salento","ror":"https://ror.org/03fc1k060","country_code":"IT","type":"education","lineage":["https://openalex.org/I142910587"]},{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Maria Mirto","raw_affiliation_strings":["Lecce & SPACI Consortium, University of Salerno, Italy","University of Salento, Lecce & SPACI Consortium, Italy"],"affiliations":[{"raw_affiliation_string":"Lecce & SPACI Consortium, University of Salerno, Italy","institution_ids":["https://openalex.org/I131729948"]},{"raw_affiliation_string":"University of Salento, Lecce & SPACI Consortium, Italy","institution_ids":["https://openalex.org/I142910587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068671472","display_name":"Marco Passante","orcid":null},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]},{"id":"https://openalex.org/I142910587","display_name":"University of Salento","ror":"https://ror.org/03fc1k060","country_code":"IT","type":"education","lineage":["https://openalex.org/I142910587"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Passante","raw_affiliation_strings":["Lecce & SPACI Consortium, University of Salerno, Italy","University of Salento, Lecce & SPACI Consortium, Italy"],"affiliations":[{"raw_affiliation_string":"Lecce & SPACI Consortium, University of Salerno, Italy","institution_ids":["https://openalex.org/I131729948"]},{"raw_affiliation_string":"University of Salento, Lecce & SPACI Consortium, Italy","institution_ids":["https://openalex.org/I142910587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079559754","display_name":"Italo Epicoco","orcid":"https://orcid.org/0000-0002-6408-1335"},"institutions":[{"id":"https://openalex.org/I142910587","display_name":"University of Salento","ror":"https://ror.org/03fc1k060","country_code":"IT","type":"education","lineage":["https://openalex.org/I142910587"]},{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Italo Epicoco","raw_affiliation_strings":["Lecce & SPACI Consortium, University of Salerno, Italy","University of Salento, Lecce & SPACI Consortium, Italy"],"affiliations":[{"raw_affiliation_string":"Lecce & SPACI Consortium, University of Salerno, Italy","institution_ids":["https://openalex.org/I131729948"]},{"raw_affiliation_string":"University of Salento, Lecce & SPACI Consortium, Italy","institution_ids":["https://openalex.org/I142910587"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068232148","display_name":"Giovanni Aloisio","orcid":"https://orcid.org/0000-0001-5902-6983"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]},{"id":"https://openalex.org/I142910587","display_name":"University of Salento","ror":"https://ror.org/03fc1k060","country_code":"IT","type":"education","lineage":["https://openalex.org/I142910587"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giovanni Aloisio","raw_affiliation_strings":["Lecce & SPACI Consortium, University of Salerno, Italy","University of Salento, Lecce & SPACI Consortium, Italy"],"affiliations":[{"raw_affiliation_string":"Lecce & SPACI Consortium, University of Salerno, Italy","institution_ids":["https://openalex.org/I131729948"]},{"raw_affiliation_string":"University of Salento, Lecce & SPACI Consortium, Italy","institution_ids":["https://openalex.org/I142910587"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5052404540"],"corresponding_institution_ids":["https://openalex.org/I131729948","https://openalex.org/I142910587"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16182772,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"7","issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9871000051498413,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9161999821662903,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/orchestration","display_name":"Orchestration","score":0.782364010810852},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.771713137626648},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7422093749046326},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.6981078386306763},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6662440299987793},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.6131623387336731},{"id":"https://openalex.org/keywords/virtual-laboratory","display_name":"Virtual Laboratory","score":0.5542383790016174},{"id":"https://openalex.org/keywords/problem-solving-environment","display_name":"Problem solving environment","score":0.5243956446647644},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.5205436944961548},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4382554590702057},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.42261332273483276},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.38833779096603394},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3383689522743225},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.32304298877716064},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20427429676055908},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.16288340091705322},{"id":"https://openalex.org/keywords/multimedia","display_name":"Multimedia","score":0.1343499720096588},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10953384637832642},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.08862349390983582}],"concepts":[{"id":"https://openalex.org/C199168358","wikidata":"https://www.wikidata.org/wiki/Q3367000","display_name":"Orchestration","level":3,"score":0.782364010810852},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.771713137626648},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7422093749046326},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.6981078386306763},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6662440299987793},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.6131623387336731},{"id":"https://openalex.org/C2777609615","wikidata":"https://www.wikidata.org/wiki/Q2527919","display_name":"Virtual Laboratory","level":2,"score":0.5542383790016174},{"id":"https://openalex.org/C2780665868","wikidata":"https://www.wikidata.org/wiki/Q7246952","display_name":"Problem solving environment","level":2,"score":0.5243956446647644},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.5205436944961548},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4382554590702057},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.42261332273483276},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.38833779096603394},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3383689522743225},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.32304298877716064},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20427429676055908},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.16288340091705322},{"id":"https://openalex.org/C49774154","wikidata":"https://www.wikidata.org/wiki/Q131765","display_name":"Multimedia","level":1,"score":0.1343499720096588},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10953384637832642},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.08862349390983582},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C558565934","wikidata":"https://www.wikidata.org/wiki/Q2743","display_name":"Musical","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/cbms.2009.5255413","is_oa":false,"landing_page_url":"https://doi.org/10.1109/cbms.2009.5255413","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2009 22nd IEEE International Symposium on Computer-Based Medical Systems","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5299999713897705,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W133809791","https://openalex.org/W1555993967","https://openalex.org/W1565709818","https://openalex.org/W1567971565","https://openalex.org/W1596101449","https://openalex.org/W1904815815","https://openalex.org/W2065398612","https://openalex.org/W2096160662","https://openalex.org/W2113541044","https://openalex.org/W2114583524","https://openalex.org/W2123768693","https://openalex.org/W2142766432","https://openalex.org/W2143894238","https://openalex.org/W2146058063","https://openalex.org/W2158714788","https://openalex.org/W2294754564","https://openalex.org/W2336303174","https://openalex.org/W3088617589","https://openalex.org/W3148640261","https://openalex.org/W6633901960","https://openalex.org/W6635644222","https://openalex.org/W6696899738","https://openalex.org/W7067074622"],"related_works":["https://openalex.org/W1968246720","https://openalex.org/W1514734995","https://openalex.org/W2488710568","https://openalex.org/W1485908060","https://openalex.org/W4233470469","https://openalex.org/W2987098544","https://openalex.org/W15668764","https://openalex.org/W2003995448","https://openalex.org/W1543628123","https://openalex.org/W1535843807"],"abstract_inverted_index":{"Problem":[0],"solving":[1],"environments":[2],"(PSEs)":[3],"are":[4,65,73,90],"a":[5,15,23,45,151],"very":[6,60],"useful":[7],"tool":[8],"which":[9],"combines":[10],"simulation":[11,77],"and":[12,86,92,124,131,137],"visualization":[13],"into":[14],"single":[16],"package.":[17],"The":[18,37,113],"consequential":[19],"benefit":[20],"of":[21,39,54,78,115],"such":[22],"system":[24],"is":[25,44,118],"that":[26,88,93],"it":[27],"facilitates":[28],"experimentation":[29],"with":[30,42,62,150],"minimal":[31],"additional":[32],"effort":[33],"from":[34],"the":[35,52,76,99,104,109,142,147],"user.":[36],"integration":[38],"grid":[40,57,105],"technology":[41,107],"PSEs":[43,64],"natural":[46],"step":[47],"in":[48,56,134],"this":[49,116],"evolution.":[50],"Finally,":[51],"idea":[53],"ldquoworkflowrdquo":[55],"terminology":[58],"corresponds":[59],"closely":[61],"how":[63],"generally":[66],"constructed":[67],"within":[68],"e-Science":[69],"environments.":[70],"Indeed,":[71],"workflows":[72],"needed":[74],"for":[75,102],"complex":[79],"experiments":[80],"because":[81],"they":[82],"integrate":[83],"several":[84],"applications":[85],"data":[87],"often":[89],"distributed":[91],"need":[94],"careful":[95],"orchestration.":[96],"These":[97],"were":[98],"main":[100],"reasons":[101],"adopting":[103],"PSE":[106],"inside":[108],"LIBI":[110,148],"virtual":[111],"laboratory.":[112],"goal":[114],"project":[117,149],"setting":[119],"up":[120],"an":[121],"advanced":[122],"bioinformatics":[123],"computational":[125],"biology":[126,136],"laboratory,":[127],"focusing":[128],"on":[129],"basic":[130],"applied":[132],"research":[133],"modern":[135],"biotechnologies.":[138],"This":[139],"paper":[140],"describes":[141],"technological":[143],"solution":[144],"proposed":[145],"by":[146],"case":[152],"study.":[153]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
