{"id":"https://openalex.org/W2141884635","doi":"https://doi.org/10.1109/bmei.2012.6513116","title":"Distribution of nucleosome binding motifs around the functional sites of human housekeeping genes","display_name":"Distribution of nucleosome binding motifs around the functional sites of human housekeeping genes","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W2141884635","doi":"https://doi.org/10.1109/bmei.2012.6513116","mag":"2141884635"},"language":"en","primary_location":{"id":"doi:10.1109/bmei.2012.6513116","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bmei.2012.6513116","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 5th International Conference on BioMedical Engineering and Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016959382","display_name":"Tonglaga Bao","orcid":null},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tonglaga Bao","raw_affiliation_strings":["Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China"],"affiliations":[{"raw_affiliation_string":"Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China","institution_ids":["https://openalex.org/I2722730"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103002350","display_name":"Hong Li","orcid":"https://orcid.org/0000-0001-6819-3038"},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Li","raw_affiliation_strings":["Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China"],"affiliations":[{"raw_affiliation_string":"Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China","institution_ids":["https://openalex.org/I2722730"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033275205","display_name":"Xiaoqing Zhao","orcid":"https://orcid.org/0000-0002-6631-2870"},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoqing Zhao","raw_affiliation_strings":["Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China"],"affiliations":[{"raw_affiliation_string":"Laboratory of Theoretical Biophysics, School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"Sch. of Phys. Sci. & Technol., Inner Mongolia Univ., Hohhot, China","institution_ids":["https://openalex.org/I2722730"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5016959382"],"corresponding_institution_ids":["https://openalex.org/I2722730"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.11556824,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"876","last_page":"879"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nucleosome","display_name":"Nucleosome","score":0.8871551752090454},{"id":"https://openalex.org/keywords/housekeeping-gene","display_name":"Housekeeping gene","score":0.8653130531311035},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6170662641525269},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5606043338775635},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5494064092636108},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5229383707046509},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5069699287414551},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.48818594217300415},{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.48799505829811096},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.48384228348731995},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45400524139404297},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.4468666613101959},{"id":"https://openalex.org/keywords/housekeeping","display_name":"Housekeeping","score":0.44253605604171753},{"id":"https://openalex.org/keywords/histone","display_name":"Histone","score":0.3135295808315277},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2819070816040039}],"concepts":[{"id":"https://openalex.org/C84772758","wikidata":"https://www.wikidata.org/wiki/Q271794","display_name":"Nucleosome","level":4,"score":0.8871551752090454},{"id":"https://openalex.org/C33922130","wikidata":"https://www.wikidata.org/wiki/Q419232","display_name":"Housekeeping gene","level":4,"score":0.8653130531311035},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6170662641525269},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5606043338775635},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5494064092636108},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5229383707046509},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5069699287414551},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.48818594217300415},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.48799505829811096},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.48384228348731995},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45400524139404297},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.4468666613101959},{"id":"https://openalex.org/C90861158","wikidata":"https://www.wikidata.org/wiki/Q708514","display_name":"Housekeeping","level":3,"score":0.44253605604171753},{"id":"https://openalex.org/C64927066","wikidata":"https://www.wikidata.org/wiki/Q36293","display_name":"Histone","level":3,"score":0.3135295808315277},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2819070816040039},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bmei.2012.6513116","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bmei.2012.6513116","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 5th International Conference on BioMedical Engineering and Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W1988805124","https://openalex.org/W1998585977","https://openalex.org/W1998662768","https://openalex.org/W2010531911","https://openalex.org/W2014119967","https://openalex.org/W2022636167","https://openalex.org/W2029873987","https://openalex.org/W2037341016","https://openalex.org/W2041054269","https://openalex.org/W2060789589","https://openalex.org/W2064390432","https://openalex.org/W2069545688","https://openalex.org/W2070601597","https://openalex.org/W2072152932","https://openalex.org/W2077547710","https://openalex.org/W2089658015","https://openalex.org/W2090098862","https://openalex.org/W2110312780","https://openalex.org/W2114803986","https://openalex.org/W2117057903","https://openalex.org/W2126888219","https://openalex.org/W2144792857","https://openalex.org/W2149502295","https://openalex.org/W2152296969","https://openalex.org/W2154109129","https://openalex.org/W2157215357","https://openalex.org/W2159164310"],"related_works":["https://openalex.org/W2028359308","https://openalex.org/W2512481868","https://openalex.org/W1541391621","https://openalex.org/W2056890978","https://openalex.org/W2602058515","https://openalex.org/W2782714379","https://openalex.org/W2016751415","https://openalex.org/W2594201224","https://openalex.org/W2376115766","https://openalex.org/W2027133237"],"abstract_inverted_index":{"The":[0],"positioning":[1],"of":[2,14,32,56],"nucleosome":[3,25,57,88],"on":[4,19],"underlying":[5],"DNA":[6,85],"plays":[7],"an":[8],"important":[9],"role":[10],"in":[11,60,92],"the":[12,24,29,37,61,74,83,93],"regulation":[13],"every":[15],"process":[16],"that":[17,46,76],"occurs":[18],"DNA.":[20],"We":[21,44],"plotted":[22],"out":[23],"binding":[26,58,89],"motifs":[27,59],"around":[28],"functional":[30,69],"sites":[31],"housekeeping":[33,47],"genes":[34,48],"and":[35,39,86,101],"compared":[36],"similarities":[38],"differences":[40],"with":[41],"ensemble":[42,53],"genes.":[43,54],"found":[45],"show":[49],"stronger":[50],"preference":[51],"than":[52,67],"Proportion":[55],"transcription":[62,94,100],"start":[63,95],"region":[64,96],"is":[65],"higher":[66],"other":[68],"sites.":[70],"Our":[71],"result":[72],"confirmed":[73],"idea":[75],"nucleosomes":[77],"are":[78],"distributed":[79],"not":[80],"uniformly":[81],"along":[82],"genomic":[84],"more":[87],"signal":[90],"existed":[91],"to":[97],"facilitated":[98],"gene":[99],"expression.":[102]},"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
