{"id":"https://openalex.org/W1986591019","doi":"https://doi.org/10.1109/bibmw.2011.6112441","title":"Dealing with reusability and reproducibility for scientific workflows","display_name":"Dealing with reusability and reproducibility for scientific workflows","publication_year":2011,"publication_date":"2011-11-01","ids":{"openalex":"https://openalex.org/W1986591019","doi":"https://doi.org/10.1109/bibmw.2011.6112441","mag":"1986591019"},"language":"en","primary_location":{"id":"doi:10.1109/bibmw.2011.6112441","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112441","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"S. Lifschitz","raw_affiliation_strings":["Departamento de Informatica, PUC-Rio, Rio de Janeiro, Brazil","Departamento de Inform\u00e1tica, PUC Rio, Rio de Janeiro, Brasil#TAB#"],"affiliations":[{"raw_affiliation_string":"Departamento de Informatica, PUC-Rio, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I2699952"]},{"raw_affiliation_string":"Departamento de Inform\u00e1tica, PUC Rio, Rio de Janeiro, Brasil#TAB#","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089414129","display_name":"Luiz Fl\u00e1vio Autran Monteiro Gomes","orcid":"https://orcid.org/0000-0002-9413-7811"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"L. Gomes","raw_affiliation_strings":["Departamento de Informatica, PUC-Rio, Rio de Janeiro, Brazil","Departamento de Inform\u00e1tica, PUC Rio, Rio de Janeiro, Brasil#TAB#"],"affiliations":[{"raw_affiliation_string":"Departamento de Informatica, PUC-Rio, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I2699952"]},{"raw_affiliation_string":"Departamento de Inform\u00e1tica, PUC Rio, Rio de Janeiro, Brasil#TAB#","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042381817","display_name":"Stevens K. Rehen","orcid":"https://orcid.org/0000-0003-4216-9501"},"institutions":[{"id":"https://openalex.org/I199691007","display_name":"Brazilian Agricultural Research Corporation","ror":"https://ror.org/0482b5b22","country_code":"BR","type":"government","lineage":["https://openalex.org/I199691007"]},{"id":"https://openalex.org/I122140584","display_name":"Universidade Federal do Rio de Janeiro","ror":"https://ror.org/03490as77","country_code":"BR","type":"education","lineage":["https://openalex.org/I122140584"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"S. K. Rehen","raw_affiliation_strings":["Laboratorio Nacional de Celulas-tronco Embrionarias, UFRJ, Rio de Janeiro, Brazil","Laboratorio Nacional de Celulas-tronco Embrionarias UFRJ, Rio de Janeiro, Brasil#TAB#"],"affiliations":[{"raw_affiliation_string":"Laboratorio Nacional de Celulas-tronco Embrionarias, UFRJ, Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I199691007"]},{"raw_affiliation_string":"Laboratorio Nacional de Celulas-tronco Embrionarias UFRJ, Rio de Janeiro, Brasil#TAB#","institution_ids":["https://openalex.org/I122140584"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5085416987"],"corresponding_institution_ids":["https://openalex.org/I2699952"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.15665494,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"625","last_page":"632"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8723393678665161},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8298109769821167},{"id":"https://openalex.org/keywords/reusability","display_name":"Reusability","score":0.8233562707901001},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.6882687211036682},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.526881992816925},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.42882007360458374},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.412310391664505},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3355196714401245},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3228503465652466},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.311751127243042},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.15977776050567627},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14402732253074646},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09711363911628723}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8723393678665161},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8298109769821167},{"id":"https://openalex.org/C137981799","wikidata":"https://www.wikidata.org/wiki/Q1369184","display_name":"Reusability","level":3,"score":0.8233562707901001},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.6882687211036682},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.526881992816925},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.42882007360458374},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.412310391664505},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3355196714401245},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3228503465652466},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.311751127243042},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.15977776050567627},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14402732253074646},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09711363911628723},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibmw.2011.6112441","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibmw.2011.6112441","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W27985904","https://openalex.org/W1575885106","https://openalex.org/W1607931568","https://openalex.org/W1983833794","https://openalex.org/W1988545508","https://openalex.org/W2016097093","https://openalex.org/W2055043387","https://openalex.org/W2127918861","https://openalex.org/W2128226234","https://openalex.org/W2130479394","https://openalex.org/W2137653635","https://openalex.org/W2140157849","https://openalex.org/W2145154883","https://openalex.org/W2172143128","https://openalex.org/W2498603544","https://openalex.org/W2916302273","https://openalex.org/W3145042860","https://openalex.org/W4236236547","https://openalex.org/W6634218807"],"related_works":["https://openalex.org/W4282938614","https://openalex.org/W781411824","https://openalex.org/W2515159793","https://openalex.org/W1798542519","https://openalex.org/W4306316885","https://openalex.org/W4378878449","https://openalex.org/W2111589395","https://openalex.org/W2155486208","https://openalex.org/W2753086708","https://openalex.org/W2157615579"],"abstract_inverted_index":{"Scientific":[0],"Workflow":[1],"Management":[2],"Systems":[3],"(SWfMS)":[4],"are":[5],"being":[6],"widely":[7],"used":[8,47],"to":[9,38,48,57,95,105],"represent":[10],"and":[11,44,59,73,79,103],"execute":[12],"scientific":[13,26],"experiments.":[14],"One":[15],"particular":[16],"SWfMS":[17],"feature":[18],"that":[19,76],"has":[20,88],"received":[21],"much":[22],"attention":[23],"by":[24,81,84,112],"the":[25,29,64,97,107],"community":[27],"is":[28,77],"automatic":[30],"capture":[31],"of":[32,100,109],"provenance":[33],"data.":[34],"This":[35,86],"allows":[36],"users":[37],"track":[39],"information":[40,56,114],"about":[41,115],"which":[42],"resources":[43],"parameters":[45],"were":[46],"obtain":[49],"such":[50],"results,":[51],"but":[52],"also":[53],"other":[54],"important":[55],"validate":[58],"publish":[60],"an":[61,69,101],"experiment.":[62],"In":[63],"present":[65],"work,":[66],"we":[67],"propose":[68],"approach":[70,87],"for":[71],"modeling":[72],"storing":[74],"data":[75],"consumed":[78],"produced":[80,110],"workflows":[82],"executed":[83],"SWfMS.":[85],"two":[89],"main":[90],"objectives:":[91],"it":[92],"aims":[93],"(i)":[94],"support":[96],"strict":[98],"reproducibility":[99],"experiment":[102],"(ii)":[104],"allow":[106],"reuse":[108],"artifacts":[111],"keeping":[113],"its":[116],"origin.":[117]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
