{"id":"https://openalex.org/W7126113539","doi":"https://doi.org/10.1109/bibm66473.2025.11356052","title":"COKTrans: A Cross-Omics Knowledge Transfer Framework Based on Hierarchical Fusion for Cancer Subtype Trustworthy Classification","display_name":"COKTrans: A Cross-Omics Knowledge Transfer Framework Based on Hierarchical Fusion for Cancer Subtype Trustworthy Classification","publication_year":2025,"publication_date":"2025-12-15","ids":{"openalex":"https://openalex.org/W7126113539","doi":"https://doi.org/10.1109/bibm66473.2025.11356052"},"language":null,"primary_location":{"id":"doi:10.1109/bibm66473.2025.11356052","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356052","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5124196296","display_name":"Shudong Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shudong Wang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124184713","display_name":"Yu Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015819673","display_name":"Wenhao Wu","orcid":"https://orcid.org/0000-0002-8511-743X"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenhao Wu","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025726387","display_name":"Yunyin Li","orcid":"https://orcid.org/0009-0001-5042-5504"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunyin Li","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124291476","display_name":"Zheqi Song","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheqi Song","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5124261356","display_name":"Shanchen Pang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanchen Pang","raw_affiliation_strings":["College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Qingdao Institute of Software, China University of Petroleum (East China),Qingdao,China","institution_ids":["https://openalex.org/I4210162190"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5124196296"],"corresponding_institution_ids":["https://openalex.org/I4210162190"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.65242985,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1854","last_page":"1859"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8341000080108643,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8341000080108643,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.03180000185966492,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.02889999933540821,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.660099983215332},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6251999735832214},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.5656999945640564},{"id":"https://openalex.org/keywords/trustworthiness","display_name":"Trustworthiness","score":0.5149999856948853},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4880000054836273},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4731000065803528},{"id":"https://openalex.org/keywords/sensor-fusion","display_name":"Sensor fusion","score":0.4472000002861023}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6865000128746033},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.660099983215332},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6251999735832214},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.5656999945640564},{"id":"https://openalex.org/C153701036","wikidata":"https://www.wikidata.org/wiki/Q659974","display_name":"Trustworthiness","level":2,"score":0.5149999856948853},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4880000054836273},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4731000065803528},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4650999903678894},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.447299987077713},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.4472000002861023},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40700000524520874},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3206999897956848},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.31139999628067017},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.29670000076293945},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.2816999852657318},{"id":"https://openalex.org/C2776960227","wikidata":"https://www.wikidata.org/wiki/Q2586354","display_name":"Knowledge transfer","level":2,"score":0.27649998664855957},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27129998803138733},{"id":"https://openalex.org/C3019816032","wikidata":"https://www.wikidata.org/wiki/Q2575340","display_name":"Cancer treatment","level":3,"score":0.265500009059906},{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.2651999890804291},{"id":"https://openalex.org/C2779304628","wikidata":"https://www.wikidata.org/wiki/Q3503480","display_name":"Face (sociological concept)","level":2,"score":0.2632000148296356},{"id":"https://openalex.org/C2985322473","wikidata":"https://www.wikidata.org/wiki/Q3044843","display_name":"Cancer detection","level":3,"score":0.2522999942302704}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm66473.2025.11356052","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm66473.2025.11356052","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1766936458","display_name":null,"funder_award_id":"25CX04026A","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G3390906453","display_name":null,"funder_award_id":"2021YFA10000102","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321547","display_name":"China University of Petroleum, Beijing","ror":"https://ror.org/041qf4r12"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1930624869","https://openalex.org/W2044074081","https://openalex.org/W2060346677","https://openalex.org/W2285093314","https://openalex.org/W3048631361","https://openalex.org/W3125330584","https://openalex.org/W3170986249","https://openalex.org/W4224926219","https://openalex.org/W4252208101","https://openalex.org/W4283799942","https://openalex.org/W4312946813","https://openalex.org/W4318586192","https://openalex.org/W4367186564","https://openalex.org/W4382318546","https://openalex.org/W4391294262","https://openalex.org/W4399390205","https://openalex.org/W4406238070"],"related_works":[],"abstract_inverted_index":{"Precise":[0],"identification":[1],"of":[2,19,30,48,89,99,158,170],"complex":[3],"cancer":[4,9,20,79,118,171,180,192],"subtypes":[5],"is":[6,84,129,134,150],"crucial":[7],"for":[8,78,116,166],"diagnosis":[10],"and":[11,27,40,58,92,110,144,161,188],"personalized":[12],"treatment.":[13],"Multi-omics":[14],"integration":[15,157],"advances":[16],"the":[17,45,66,87,94,100,105,139,145,155,167],"progress":[18],"subtype":[21,80,193],"classification":[22,82,169],"research":[23,119],"by":[24],"providing":[25],"comprehensive":[26,174],"in-depth":[28],"analysis":[29],"tumor":[31],"molecular":[32,140],"mechanisms.":[33],"Due":[34],"to":[35,103,136,153],"limitations":[36],"in":[37,55,191],"detection":[38],"technology":[39],"costs,":[41,93],"as":[42,44],"well":[43],"inherent":[46],"complexity":[47],"multi-omics":[49,159],"data,":[50],"many":[51],"studies":[52],"face":[53],"challenges":[54],"fully":[56],"acquiring":[57],"efficiently":[59],"integrating":[60],"complete":[61],"omics":[62,107,114],"modalities.":[63],"To":[64],"address":[65],"above":[67],"challenges,":[68],"a":[69,112,124],"cross-omics":[70,146],"knowledge":[71],"transfer":[72,121],"framework":[73,95],"based":[74,177],"on":[75,178],"hierarchical":[76],"fusion":[77,127],"trustworthy":[81,168],"(COKTrans)":[83],"designed.":[85],"Under":[86],"condition":[88],"limited":[90],"resources":[91],"makes":[96],"full":[97],"use":[98],"observable":[101],"data":[102,160],"learn":[104],"cross":[106],"inference":[108],"mode,":[109],"supplements":[111],"richer":[113],"view":[115],"different":[117],"through":[120],"learning.":[122],"Meanwhile,":[123],"multi-level":[125],"attention":[126,132],"strategy":[128],"adopted.":[130],"The":[131],"mechanism":[133],"utilized":[135],"deeply":[137],"mine":[138],"characteristics":[141],"within":[142],"omics,":[143],"patient":[147],"interaction":[148],"association":[149],"systematically":[151],"reconstructed":[152],"achieve":[154],"effective":[156],"provide":[162],"more":[163],"powerful":[164],"support":[165],"subtypes.":[172],"Finally,":[173],"experimental":[175],"results":[176],"five":[179],"datasets":[181],"demonstrate":[182],"that":[183],"COKTrans":[184],"exhibits":[185],"superior":[186],"performance":[187],"good":[189],"generalization":[190],"classification.":[194]},"counts_by_year":[],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2026-01-30T00:00:00"}
