{"id":"https://openalex.org/W3128158319","doi":"https://doi.org/10.1109/bibm49941.2020.9313142","title":"Towards a consistent evaluation of miRNA-disease association prediction models","display_name":"Towards a consistent evaluation of miRNA-disease association prediction models","publication_year":2020,"publication_date":"2020-12-16","ids":{"openalex":"https://openalex.org/W3128158319","doi":"https://doi.org/10.1109/bibm49941.2020.9313142","mag":"3128158319"},"language":"en","primary_location":{"id":"doi:10.1109/bibm49941.2020.9313142","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm49941.2020.9313142","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019546782","display_name":"Thi Ngan Dong","orcid":"https://orcid.org/0000-0002-3240-9068"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thi Ngan Dong","raw_affiliation_strings":["L3S Research Center, Leibniz University Hannover, Hannover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"L3S Research Center, Leibniz University Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210136150","https://openalex.org/I114112103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027689420","display_name":"Megha Khosla","orcid":"https://orcid.org/0000-0002-0319-3181"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Megha Khosla","raw_affiliation_strings":["L3S Research Center, Leibniz University Hannover, Hannover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"L3S Research Center, Leibniz University Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210136150","https://openalex.org/I114112103"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.4015,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.55723012,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"1835","last_page":"1842"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5607790946960449},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.5211287140846252},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3967650532722473},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.09767073392868042}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5607790946960449},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.5211287140846252},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3967650532722473},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.09767073392868042},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm49941.2020.9313142","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm49941.2020.9313142","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.75,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1436642346","https://openalex.org/W1967087625","https://openalex.org/W2014069457","https://openalex.org/W2091019377","https://openalex.org/W2103151642","https://openalex.org/W2106029302","https://openalex.org/W2128768066","https://openalex.org/W2141222510","https://openalex.org/W2150757437","https://openalex.org/W2158135353","https://openalex.org/W2592189645","https://openalex.org/W2768924715","https://openalex.org/W2890610025","https://openalex.org/W2898440040","https://openalex.org/W2972771793","https://openalex.org/W2979556676","https://openalex.org/W2995337846","https://openalex.org/W3000082418","https://openalex.org/W3146565636","https://openalex.org/W4246271082","https://openalex.org/W6767738369"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2093578348","https://openalex.org/W2376932109","https://openalex.org/W2382290278","https://openalex.org/W2049775471","https://openalex.org/W2274850333","https://openalex.org/W2322247375"],"abstract_inverted_index":{"MicroRNA":[0],"or":[1],"miRNA":[2,25,41],"is":[3,17,26],"a":[4,10],"class":[5],"of":[6,12,22,29,69,98,116],"non-coding":[7],"RNA":[8],"with":[9],"length":[11],"approximately":[13],"22":[14],"nucleotides":[15],"that":[16],"involved":[18],"in":[19,34,46,66,87],"the":[20,30,67,83,99,109,114,137],"regulation":[21],"gene":[23],"expression.":[24],"becoming":[27],"one":[28],"promising":[31],"drug":[32,51],"targets":[33],"recent":[35,60],"years.":[36],"Identifying":[37],"potential":[38],"associations":[39],"between":[40],"and":[42,50,58,132,139,143],"disease":[43],"would":[44],"help":[45],"clinical":[47],"diagnosis,":[48],"treatment,":[49],"development.":[52],"Since":[53],"wet-lab":[54],"experiments":[55],"are":[56],"expensive":[57],"time-consuming,":[59],"years":[61],"have":[62],"seen":[63],"an":[64,96,105,121],"upsurge":[65],"number":[68],"proposed":[70],"machine":[71,89],"learning":[72,90],"based":[73],"computational":[74],"approaches.":[75,91],"Nevertheless,":[76],"we":[77,127],"discovered":[78],"three":[79],"issues":[80,93],"most":[81],"notably":[82],"data":[84],"leakage":[85],"problem":[86],"existing":[88],"These":[92],"lead":[94],"to":[95],"overestimation":[97],"methods'":[100],"performance":[101],"as":[102,104],"well":[103],"unfair":[106],"comparison":[107],"among":[108],"models":[110],"which":[111],"in-turn":[112],"hinders":[113],"adoption":[115],"these":[117],"methods.":[118],"Besides":[119],"presenting":[120],"in-depth":[122],"study":[123],"about":[124],"those":[125],"problems,":[126],"also":[128],"propose":[129],"our":[130],"solutions":[131],"recommendations.":[133],"We":[134],"release":[135],"all":[136],"code":[138],"datasets":[140],"for":[141],"reproducibility":[142],"fostering":[144],"future":[145],"development":[146],"at":[147],"https://git.13s.uni-hannover.de/dong/simp1ifyingmirna-disease.":[148]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
