{"id":"https://openalex.org/W2295476699","doi":"https://doi.org/10.1109/3pgcic.2015.123","title":"A Parallel Algorithm for the Prediction of Protein Binding Sites","display_name":"A Parallel Algorithm for the Prediction of Protein Binding Sites","publication_year":2015,"publication_date":"2015-11-01","ids":{"openalex":"https://openalex.org/W2295476699","doi":"https://doi.org/10.1109/3pgcic.2015.123","mag":"2295476699"},"language":"en","primary_location":{"id":"doi:10.1109/3pgcic.2015.123","is_oa":false,"landing_page_url":"https://doi.org/10.1109/3pgcic.2015.123","pdf_url":null,"source":{"id":"https://openalex.org/S4306497907","display_name":"2015 10th International Conference on P2P, Parallel, Grid, Cloud and Internet Computing (3PGCIC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 10th International Conference on P2P, Parallel, Grid, Cloud and Internet Computing (3PGCIC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052404540","display_name":"Maria Mirto","orcid":"https://orcid.org/0000-0001-9366-3169"},"institutions":[{"id":"https://openalex.org/I4210111827","display_name":"CMCC Foundation - Euro-Mediterranean Center on Climate Change","ror":"https://ror.org/01tf11a61","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210111827"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Maria Mirto","raw_affiliation_strings":["Euro-Mediterranean Center on Climate Change (CMCC)"],"affiliations":[{"raw_affiliation_string":"Euro-Mediterranean Center on Climate Change (CMCC)","institution_ids":["https://openalex.org/I4210111827"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068232148","display_name":"Giovanni Aloisio","orcid":"https://orcid.org/0000-0001-5902-6983"},"institutions":[{"id":"https://openalex.org/I142910587","display_name":"University of Salento","ror":"https://ror.org/03fc1k060","country_code":"IT","type":"education","lineage":["https://openalex.org/I142910587"]},{"id":"https://openalex.org/I4210111827","display_name":"CMCC Foundation - Euro-Mediterranean Center on Climate Change","ror":"https://ror.org/01tf11a61","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210111827"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giovanni Aloisio","raw_affiliation_strings":["Euro-Mediterranean Center on Climate Change (CMCC)","University of Salento, Lecce, Italy"],"affiliations":[{"raw_affiliation_string":"Euro-Mediterranean Center on Climate Change (CMCC)","institution_ids":["https://openalex.org/I4210111827"]},{"raw_affiliation_string":"University of Salento, Lecce, Italy","institution_ids":["https://openalex.org/I142910587"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5052404540"],"corresponding_institution_ids":["https://openalex.org/I4210111827"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12096774,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"85","last_page":"91"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7003557085990906},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5922136306762695},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5454285144805908},{"id":"https://openalex.org/keywords/parallel-algorithm","display_name":"Parallel algorithm","score":0.5377853512763977},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.5074431300163269},{"id":"https://openalex.org/keywords/algorithm-design","display_name":"Algorithm design","score":0.43812844157218933},{"id":"https://openalex.org/keywords/range","display_name":"Range (aeronautics)","score":0.4342886209487915},{"id":"https://openalex.org/keywords/molecular-biophysics","display_name":"Molecular biophysics","score":0.4106888771057129},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.19178253412246704},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10397180914878845},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07420477271080017},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.0702887773513794}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7003557085990906},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5922136306762695},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5454285144805908},{"id":"https://openalex.org/C120373497","wikidata":"https://www.wikidata.org/wiki/Q1087987","display_name":"Parallel algorithm","level":2,"score":0.5377853512763977},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.5074431300163269},{"id":"https://openalex.org/C106516650","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm design","level":2,"score":0.43812844157218933},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.4342886209487915},{"id":"https://openalex.org/C70636015","wikidata":"https://www.wikidata.org/wiki/Q4300350","display_name":"Molecular biophysics","level":2,"score":0.4106888771057129},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.19178253412246704},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10397180914878845},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07420477271080017},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0702887773513794},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/3pgcic.2015.123","is_oa":false,"landing_page_url":"https://doi.org/10.1109/3pgcic.2015.123","pdf_url":null,"source":{"id":"https://openalex.org/S4306497907","display_name":"2015 10th International Conference on P2P, Parallel, Grid, Cloud and Internet Computing (3PGCIC)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 10th International Conference on P2P, Parallel, Grid, Cloud and Internet Computing (3PGCIC)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1517566065","https://openalex.org/W2031194866","https://openalex.org/W2066143642","https://openalex.org/W2081201773","https://openalex.org/W2091563009","https://openalex.org/W2096039340","https://openalex.org/W2105902442","https://openalex.org/W2128402268","https://openalex.org/W2144714500","https://openalex.org/W2326849382","https://openalex.org/W6834580632"],"related_works":["https://openalex.org/W2047838177","https://openalex.org/W2575434942","https://openalex.org/W2329052364","https://openalex.org/W2064383522","https://openalex.org/W2054477344","https://openalex.org/W3113347309","https://openalex.org/W4301605755","https://openalex.org/W2009290884","https://openalex.org/W2161236781","https://openalex.org/W3003034148"],"abstract_inverted_index":{"The":[0,50,70,87],"Pocket-Finder":[1,48],"algorithm":[2,53,72,88],"identifies":[3],"the":[4,47],"location":[5],"of":[6,21,35,46,80],"ligand":[7],"binding":[8,61],"sites":[9,62],"in":[10],"a":[11,15,19,43,55,77],"protein":[12],"and":[13,30,33,63,83],"is":[14],"fundamental":[16],"component":[17],"for":[18,67],"range":[20],"applications":[22],"including":[23],"molecular":[24],"docking,":[25],"de":[26],"novo":[27],"drug":[28],"design":[29],"structural":[31],"identification":[32],"comparison":[34],"functional":[36],"sites.":[37],"In":[38],"this":[39],"paper,":[40],"we":[41],"propose":[42],"parallel":[44,52,68],"version":[45],"algorithm.":[49],"proposed":[51,71],"uses":[54],"geometrical":[56],"approach":[57],"to":[58,95],"locate":[59],"favorable":[60],"has":[64,73],"been":[65,74],"MPI-enabled":[66],"execution.":[69],"applied":[75,94],"on":[76],"small":[78],"test":[79],"15":[81],"proteins":[82,85],"2":[84],"complexes.":[86],"gets":[89],"very":[90],"interesting":[91],"results":[92],"when":[93],"large":[96],"proteins.":[97]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
