{"id":"https://openalex.org/W4237010587","doi":"https://doi.org/10.1109/visual.2002.1183818","title":"Case study: A virtual environment for genomic data visualization","display_name":"Case study: A virtual environment for genomic data visualization","publication_year":2003,"publication_date":"2003-06-26","ids":{"openalex":"https://openalex.org/W4237010587","doi":"https://doi.org/10.1109/visual.2002.1183818"},"language":"en","primary_location":{"id":"doi:10.1109/visual.2002.1183818","is_oa":false,"landing_page_url":"https://doi.org/10.1109/visual.2002.1183818","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Visualization, 2002. VIS 2002.","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040659878","display_name":"R.M. Adams","orcid":null},"institutions":[{"id":"https://openalex.org/I4210106297","display_name":"MacroGenics (United States)","ror":"https://ror.org/01hcd4187","country_code":"US","type":"company","lineage":["https://openalex.org/I4210106297"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R.M. Adams","raw_affiliation_strings":["Variagenics, Inc., USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Variagenics, Inc., USA","institution_ids":["https://openalex.org/I4210106297"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086260296","display_name":"B. Stancampiano","orcid":null},"institutions":[{"id":"https://openalex.org/I4210106297","display_name":"MacroGenics (United States)","ror":"https://ror.org/01hcd4187","country_code":"US","type":"company","lineage":["https://openalex.org/I4210106297"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Stancampiano","raw_affiliation_strings":["Variagenics, Inc., USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Variagenics, Inc., USA","institution_ids":["https://openalex.org/I4210106297"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030083928","display_name":"M. McKenna","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. McKenna","raw_affiliation_strings":["Small Design Firm, Inc., USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Small Design Firm, Inc., USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073883651","display_name":"D. Small","orcid":null},"institutions":[{"id":"https://openalex.org/I4210106297","display_name":"MacroGenics (United States)","ror":"https://ror.org/01hcd4187","country_code":"US","type":"company","lineage":["https://openalex.org/I4210106297"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Small","raw_affiliation_strings":["Variagenics, Inc., USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Variagenics, Inc., USA","institution_ids":["https://openalex.org/I4210106297"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"513","last_page":"516"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.921500027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.921500027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7540795803070068},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7435389757156372},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7212424278259277},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6761773824691772},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6171523928642273},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5491188764572144},{"id":"https://openalex.org/keywords/information-visualization","display_name":"Information visualization","score":0.5303314924240112},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4841066598892212},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4606935679912567},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.43278828263282776},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.42651426792144775},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3636162281036377},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33491164445877075},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.223348468542099},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.16727697849273682},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1430250108242035},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.10477614402770996}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7540795803070068},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7435389757156372},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7212424278259277},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6761773824691772},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6171523928642273},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5491188764572144},{"id":"https://openalex.org/C185578843","wikidata":"https://www.wikidata.org/wiki/Q10609775","display_name":"Information visualization","level":3,"score":0.5303314924240112},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4841066598892212},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4606935679912567},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.43278828263282776},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.42651426792144775},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3636162281036377},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33491164445877075},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.223348468542099},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.16727697849273682},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1430250108242035},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.10477614402770996},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/visual.2002.1183818","is_oa":false,"landing_page_url":"https://doi.org/10.1109/visual.2002.1183818","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Visualization, 2002. VIS 2002.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3010975807","https://openalex.org/W2027333138","https://openalex.org/W3185027765","https://openalex.org/W2096373083","https://openalex.org/W2105200106","https://openalex.org/W2151530263","https://openalex.org/W2104025928","https://openalex.org/W1574055964","https://openalex.org/W2295030662","https://openalex.org/W3009051979"],"abstract_inverted_index":{"With":[0],"the":[1,4,10,16,84],"completion":[2],"of":[3,12,89],"human":[5],"genome":[6],"sequence,":[7],"and":[8,20,30,69,86],"with":[9,39,81],"proliferation":[11],"genome-related":[13],"annotation":[14],"data,":[15],"need":[17],"for":[18,24],"scalable":[19],"more":[21],"intuitive":[22],"means":[23],"analysis":[25],"becomes":[26],"critical,":[27],"At":[28],"Variagenics":[29],"Small":[31],"Design":[32],"Firm,":[33],"we":[34],"have":[35],"addressed":[36],"this":[37],"problem":[38],"a":[40,52],"coherent":[41],"three-dimensional":[42],"space":[43],"in":[44,51,58,76],"which":[45],"all":[46],"data":[47],"can":[48],"be":[49],"seen":[50],"single":[53],"context.":[54],"This":[55],"tool":[56],"aids":[57],"integrating":[59],"information":[60],"at":[61],"vastly":[62],"divergent":[63],"scales":[64],"while":[65],"maintaining":[66],"accurate":[67],"spatial":[68],"size":[70],"relationships.":[71],"Our":[72],"visualization":[73],"was":[74],"successful":[75],"communicating":[77],"to":[78],"project":[79],"teams":[80],"diverse":[82],"backgrounds":[83],"magnitude":[85],"biological":[87],"implication":[88],"genetic":[90],"variation.":[91]},"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
