{"id":"https://openalex.org/W4389988665","doi":"https://doi.org/10.1109/vis54172.2023.00030","title":"Vis-SPLIT: Interactive Hierarchical Modeling for mRNA Expression Classification","display_name":"Vis-SPLIT: Interactive Hierarchical Modeling for mRNA Expression Classification","publication_year":2023,"publication_date":"2023-10-21","ids":{"openalex":"https://openalex.org/W4389988665","doi":"https://doi.org/10.1109/vis54172.2023.00030","pmid":"https://pubmed.ncbi.nlm.nih.gov/38881685"},"language":"en","primary_location":{"id":"doi:10.1109/vis54172.2023.00030","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/vis54172.2023.00030","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Visualization and Visual Analytics (VIS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11179685","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114081520","display_name":"Braden Roper","orcid":null},"institutions":[{"id":"https://openalex.org/I8692664","display_name":"University of Oklahoma","ror":"https://ror.org/02aqsxs83","country_code":"US","type":"education","lineage":["https://openalex.org/I8692664"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Braden Roper","raw_affiliation_strings":["University of Oklahoma"],"affiliations":[{"raw_affiliation_string":"University of Oklahoma","institution_ids":["https://openalex.org/I8692664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078524761","display_name":"James C. Mathews","orcid":"https://orcid.org/0000-0002-8247-7536"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James C. Mathews","raw_affiliation_strings":["Memorial Sloan Kettering Cancer Center"],"affiliations":[{"raw_affiliation_string":"Memorial Sloan Kettering Cancer Center","institution_ids":["https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089881940","display_name":"Saad Nadeem","orcid":"https://orcid.org/0000-0001-5030-9792"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Saad Nadeem","raw_affiliation_strings":["Memorial Sloan Kettering Cancer Center"],"affiliations":[{"raw_affiliation_string":"Memorial Sloan Kettering Cancer Center","institution_ids":["https://openalex.org/I1334819555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112493489","display_name":"Ji Hwan Park","orcid":null},"institutions":[{"id":"https://openalex.org/I8692664","display_name":"University of Oklahoma","ror":"https://ror.org/02aqsxs83","country_code":"US","type":"education","lineage":["https://openalex.org/I8692664"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ji Hwan Park","raw_affiliation_strings":["University of Oklahoma"],"affiliations":[{"raw_affiliation_string":"University of Oklahoma","institution_ids":["https://openalex.org/I8692664"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5114081520"],"corresponding_institution_ids":["https://openalex.org/I8692664"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.17478096,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"9","issue":null,"first_page":"106","last_page":"110"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9872000217437744,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7387068271636963},{"id":"https://openalex.org/keywords/visual-analytics","display_name":"Visual analytics","score":0.6949796676635742},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.6733527779579163},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.656920313835144},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5711768865585327},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5238573551177979},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5173918008804321},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.488484263420105},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4525468051433563},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4462512731552124},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.4318876564502716},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.422067254781723},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38832080364227295},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3354535400867462},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.21561062335968018}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7387068271636963},{"id":"https://openalex.org/C59732488","wikidata":"https://www.wikidata.org/wiki/Q2528440","display_name":"Visual analytics","level":3,"score":0.6949796676635742},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.6733527779579163},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.656920313835144},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5711768865585327},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5238573551177979},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5173918008804321},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.488484263420105},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4525468051433563},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4462512731552124},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.4318876564502716},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.422067254781723},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38832080364227295},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3354535400867462},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.21561062335968018},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/vis54172.2023.00030","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/vis54172.2023.00030","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Visualization and Visual Analytics (VIS)","raw_type":"proceedings-article"},{"id":"pmid:38881685","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38881685","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Visualization Conference : VIS. IEEE Conference on Visualization","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11179685","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11179685","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Vis Conf","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11179685","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11179685","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Vis Conf","raw_type":"Text"},"sustainable_development_goals":[{"score":0.7099999785423279,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W1555148682","https://openalex.org/W1982729887","https://openalex.org/W2000077490","https://openalex.org/W2025394193","https://openalex.org/W2033072655","https://openalex.org/W2044702943","https://openalex.org/W2059127353","https://openalex.org/W2062937620","https://openalex.org/W2068881679","https://openalex.org/W2097255042","https://openalex.org/W2106833357","https://openalex.org/W2131994307","https://openalex.org/W2132619562","https://openalex.org/W2135000328","https://openalex.org/W2150926065","https://openalex.org/W2152825437","https://openalex.org/W2155123448","https://openalex.org/W2187089797","https://openalex.org/W2259802687","https://openalex.org/W2294798173","https://openalex.org/W2464824038","https://openalex.org/W2467197661","https://openalex.org/W2517066960","https://openalex.org/W2741564801","https://openalex.org/W2742474178","https://openalex.org/W2750682442","https://openalex.org/W2803116354","https://openalex.org/W2907783748","https://openalex.org/W2949272108","https://openalex.org/W2964691289","https://openalex.org/W2970227992","https://openalex.org/W3005806855","https://openalex.org/W3092212286","https://openalex.org/W3128792962","https://openalex.org/W4206795115","https://openalex.org/W4252309212","https://openalex.org/W4293241248","https://openalex.org/W6633204899"],"related_works":["https://openalex.org/W2062940763","https://openalex.org/W2186032312","https://openalex.org/W2158984754","https://openalex.org/W3149127250","https://openalex.org/W2906286747","https://openalex.org/W2080934634","https://openalex.org/W4246764483","https://openalex.org/W2126824079","https://openalex.org/W2007038549","https://openalex.org/W2116732611"],"abstract_inverted_index":{"We":[0,65],"propose":[1],"an":[2,107],"interactive":[3],"visual":[4,30],"analytics":[5],"tool,":[6],"Vis-SPLIT,":[7],"for":[8,37,57],"partitioning":[9,51],"a":[10,26,34,73],"population":[11],"of":[12,69],"individuals":[13],"into":[14,100],"groups":[15],"with":[16,80],"similar":[17],"gene":[18,44],"signatures.":[19,64],"Vis-SPLIT":[20,87],"allows":[21],"users":[22],"to":[23,32,48,96,106],"interactively":[24],"explore":[25],"dataset":[27],"and":[28,46,61,76],"exploit":[29],"separations":[31],"build":[33],"classification":[35,109],"model":[36,60],"specific":[38,50],"cancers.":[39],"The":[40],"visualization":[41],"components":[42],"reveal":[43],"expression":[45],"correlation":[47],"assist":[49],"decisions,":[52],"while":[53],"also":[54],"providing":[55],"overviews":[56],"the":[58,67],"decision":[59],"clustered":[62],"genetic":[63,94],"demonstrate":[66],"effectiveness":[68],"our":[70],"framework":[71],"through":[72],"case":[74],"study":[75],"evaluate":[77],"its":[78],"usability":[79],"domain":[81],"experts.":[82],"Our":[83],"results":[84],"show":[85],"that":[86],"can":[88],"classify":[89],"patients":[90],"based":[91],"on":[92],"their":[93],"signatures":[95],"effectively":[97],"gain":[98],"insights":[99],"RNA":[101],"sequencing":[102],"data,":[103],"as":[104],"compared":[105],"existing":[108],"system.":[110]},"counts_by_year":[],"updated_date":"2025-12-25T23:11:45.687758","created_date":"2025-10-10T00:00:00"}
