{"id":"https://openalex.org/W3214993109","doi":"https://doi.org/10.1109/vis49827.2021.9623317","title":"CellProfiler Analyst Web (CPAW) - Exploration, analysis, and classification of biological images on the web","display_name":"CellProfiler Analyst Web (CPAW) - Exploration, analysis, and classification of biological images on the web","publication_year":2021,"publication_date":"2021-10-01","ids":{"openalex":"https://openalex.org/W3214993109","doi":"https://doi.org/10.1109/vis49827.2021.9623317","mag":"3214993109"},"language":"en","primary_location":{"id":"doi:10.1109/vis49827.2021.9623317","is_oa":false,"landing_page_url":"https://doi.org/10.1109/vis49827.2021.9623317","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE Visualization Conference (VIS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010229364","display_name":"Bella Baidak","orcid":null},"institutions":[{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bella Baidak","raw_affiliation_strings":["University of Massachusetts Boston"],"affiliations":[{"raw_affiliation_string":"University of Massachusetts Boston","institution_ids":["https://openalex.org/I33434090"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034577482","display_name":"Yahiya Hussain","orcid":null},"institutions":[{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yahiya Hussain","raw_affiliation_strings":["University of Massachusetts Boston"],"affiliations":[{"raw_affiliation_string":"University of Massachusetts Boston","institution_ids":["https://openalex.org/I33434090"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017383187","display_name":"Emma Kelminson","orcid":null},"institutions":[{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emma Kelminson","raw_affiliation_strings":["University of Massachusetts Boston"],"affiliations":[{"raw_affiliation_string":"University of Massachusetts Boston","institution_ids":["https://openalex.org/I33434090"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090485738","display_name":"Thouis R. Jones","orcid":"https://orcid.org/0000-0001-6584-9660"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"funder","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thouis R. Jones","raw_affiliation_strings":["The Broad Institute of MIT and Harvard"],"affiliations":[{"raw_affiliation_string":"The Broad Institute of MIT and Harvard","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069954852","display_name":"Loraine Franke","orcid":"https://orcid.org/0000-0001-8560-2729"},"institutions":[{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Loraine Franke","raw_affiliation_strings":["University of Massachusetts Boston"],"affiliations":[{"raw_affiliation_string":"University of Massachusetts Boston","institution_ids":["https://openalex.org/I33434090"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062859783","display_name":"Daniel Haehn","orcid":"https://orcid.org/0000-0001-9144-3461"},"institutions":[{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Haehn","raw_affiliation_strings":["University of Massachusetts Boston"],"affiliations":[{"raw_affiliation_string":"University of Massachusetts Boston","institution_ids":["https://openalex.org/I33434090"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5010229364"],"corresponding_institution_ids":["https://openalex.org/I33434090"],"apc_list":null,"apc_paid":null,"fwci":0.749,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.82299861,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"131","last_page":"135"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9830999970436096,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8250630497932434},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6923211216926575},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5864226818084717},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.580199658870697},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5365761518478394},{"id":"https://openalex.org/keywords/web-page","display_name":"Web page","score":0.5065749883651733},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.48710203170776367},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4724595546722412},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.44438275694847107},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33931344747543335},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.3284109830856323},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.30471932888031006},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1726801097393036},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.14456585049629211}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8250630497932434},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6923211216926575},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5864226818084717},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.580199658870697},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5365761518478394},{"id":"https://openalex.org/C21959979","wikidata":"https://www.wikidata.org/wiki/Q36774","display_name":"Web page","level":2,"score":0.5065749883651733},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.48710203170776367},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4724595546722412},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.44438275694847107},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33931344747543335},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.3284109830856323},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.30471932888031006},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1726801097393036},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.14456585049629211}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/vis49827.2021.9623317","is_oa":false,"landing_page_url":"https://doi.org/10.1109/vis49827.2021.9623317","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE Visualization Conference (VIS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.6399999856948853}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1528049883","https://openalex.org/W1972552638","https://openalex.org/W2091781764","https://openalex.org/W2107554012","https://openalex.org/W2121469024","https://openalex.org/W2139442812","https://openalex.org/W2140099710","https://openalex.org/W2157289187","https://openalex.org/W2163018106","https://openalex.org/W2168166653","https://openalex.org/W2467414813","https://openalex.org/W2580035316","https://openalex.org/W2721321289","https://openalex.org/W2739783898","https://openalex.org/W2811106513","https://openalex.org/W2952481429","https://openalex.org/W2975634117","https://openalex.org/W6631844020","https://openalex.org/W6680423257"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W188202134","https://openalex.org/W2397952901","https://openalex.org/W2376164011","https://openalex.org/W1594341569","https://openalex.org/W1511683926","https://openalex.org/W2072426277"],"abstract_inverted_index":{"CellProfiler":[0,31,199],"Analyst":[1,32,200],"(CPA)":[2],"has":[3,62],"enabled":[4],"the":[5,42,83,87,114,134,148,151,155,169,179,185],"scientific":[6],"research":[7],"community":[8],"to":[9,82,93,110,125,133,136,193],"explore":[10,141],"image-based":[11],"data":[12,143],"and":[13,38,50,58,65,75,140,150,175,204],"classify":[14],"complex":[15],"biological":[16],"phenotypes":[17],"through":[18],"an":[19,70,158],"interactive":[20],"user":[21,115,135],"interface":[22,116],"since":[23],"its":[24],"release":[25],"in":[26,157,173],"2008.":[27],"This":[28],"paper":[29],"describes":[30],"Web":[33,201],"(CPAW),":[34],"a":[35,52,80,94,119,126,130],"newly":[36],"redesigned":[37],"web-based":[39],"version":[40,153],"of":[41,91,154,198],"software,":[43],"allowing":[44,103],"for":[45,55],"greater":[46],"accessibility,":[47],"quicker":[48],"setup,":[49],"facilitating":[51],"simple":[53,122],"workflow":[54],"users.":[56],"Installation":[57],"managing":[59],"new":[60,152],"versions":[61],"been":[63],"challenging":[64],"time-consuming,":[66],"historically.":[67],"CPAW":[68,85,128,174,191],"is":[69,202],"alternative":[71],"that":[72,165],"ensures":[73],"installation":[74],"future":[76],"updates":[77],"are":[78],"not":[79],"hassle":[81],"user.":[84],"ports":[86],"core":[88],"iteration":[89],"loop":[90],"CPA":[92,176,194],"pure":[95],"server-less":[96],"browser":[97],"environment":[98],"using":[99,190],"modern":[100],"web-development":[101],"technologies,":[102],"computationally":[104],"heavy":[105],"activities,":[106],"like":[107],"machine":[108],"learning,":[109],"occur":[111],"without":[112],"freezing":[113],"(UI).":[117],"With":[118],"setup":[120],"as":[121,123],"navigating":[124],"website,":[127],"presents":[129],"clean":[131],"UI":[132],"refine":[137],"their":[138],"classifier":[139],"pheno-typic":[142],"easily.":[144],"We":[145,163],"evaluated":[146],"both":[147],"old":[149],"software":[156],"extensive":[159],"domain":[160],"expert":[161],"study.":[162],"found":[164],"users":[166,183],"could":[167],"complete":[168],"essential":[170],"classification":[171],"tasks":[172,186],"3.0":[177],"with":[178],"same":[180],"efficiency.":[181],"Additionally,":[182],"completed":[184],"20":[187],"percent":[188],"faster":[189],"compared":[192],"3.0.":[195],"The":[196],"code":[197],"open-source":[203],"available":[205],"at":[206],"https://mpsych.github.io/CellProfilerAnalystWeb/.":[207]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
