{"id":"https://openalex.org/W4417248865","doi":"https://doi.org/10.1109/tvcg.2025.3634794","title":"SEAL: Spatially-resolved Embedding Analysis with Linked Imaging Data","display_name":"SEAL: Spatially-resolved Embedding Analysis with Linked Imaging Data","publication_year":2025,"publication_date":"2025-12-11","ids":{"openalex":"https://openalex.org/W4417248865","doi":"https://doi.org/10.1109/tvcg.2025.3634794","pmid":"https://pubmed.ncbi.nlm.nih.gov/41379922"},"language":"en","primary_location":{"id":"doi:10.1109/tvcg.2025.3634794","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2025.3634794","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13130870/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018685036","display_name":"Simon Warchol","orcid":"https://orcid.org/0000-0001-9067-6888"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210162078","display_name":"General Engineering and Research (United States)","ror":"https://ror.org/055sxys40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210162078"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simon Warchol","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, USA","Engineering and Applied Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Engineering and Applied Sciences","institution_ids":["https://openalex.org/I4210162078"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063966157","display_name":"Grace Guo","orcid":"https://orcid.org/0000-0001-8733-6268"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210162078","display_name":"General Engineering and Research (United States)","ror":"https://ror.org/055sxys40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210162078"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Grace Guo","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, USA","Engineering and Applied Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Engineering and Applied Sciences","institution_ids":["https://openalex.org/I4210162078"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050632485","display_name":"Johannes Knittel","orcid":"https://orcid.org/0000-0002-4889-5232"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210162078","display_name":"General Engineering and Research (United States)","ror":"https://ror.org/055sxys40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210162078"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Johannes Knitte","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, USA","Engineering and Applied Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Engineering and Applied Sciences","institution_ids":["https://openalex.org/I4210162078"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032135734","display_name":"Dan Freeman","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dan Freeman","raw_affiliation_strings":["Laboratory of Systems Pharmacology, Harvard Medical School, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Systems Pharmacology, Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077350902","display_name":"Usha Bhalla","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210162078","display_name":"General Engineering and Research (United States)","ror":"https://ror.org/055sxys40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210162078"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Usha Shalla","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, USA","Engineering and Applied Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Engineering and Applied Sciences","institution_ids":["https://openalex.org/I4210162078"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008170279","display_name":"Jeremy L. Muhlich","orcid":"https://orcid.org/0000-0002-0811-637X"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeremy L Muhlich","raw_affiliation_strings":["Laboratory of Systems Pharmacology, Harvard Medical School, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Systems Pharmacology, Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063426870","display_name":"Peter K. Sorger","orcid":"https://orcid.org/0000-0002-3364-1838"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter K. Sorger","raw_affiliation_strings":["Laboratory of Systems Pharmacology, Harvard Medical School, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Systems Pharmacology, Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043151044","display_name":"Hanspeter Pfister","orcid":"https://orcid.org/0000-0002-3620-2582"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210162078","display_name":"General Engineering and Research (United States)","ror":"https://ror.org/055sxys40","country_code":"US","type":"company","lineage":["https://openalex.org/I4210162078"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanspeter Pfister","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, USA","Engineering and Applied Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Engineering and Applied Sciences","institution_ids":["https://openalex.org/I4210162078"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.3043896,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"32","issue":"1","first_page":"484","last_page":"494"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.7684000134468079,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.7684000134468079,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12536","display_name":"Topological and Geometric Data Analysis","score":0.05570000037550926,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.04340000078082085,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7324000000953674},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6272000074386597},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5120999813079834},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.47909998893737793},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.46779999136924744},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.4498000144958496},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4336000084877014},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.41780000925064087},{"id":"https://openalex.org/keywords/dimensionality-reduction","display_name":"Dimensionality reduction","score":0.38359999656677246}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8353999853134155},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7324000000953674},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6272000074386597},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5120999813079834},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5052000284194946},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.47909998893737793},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.46779999136924744},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.4498000144958496},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4336000084877014},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.41780000925064087},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39910000562667847},{"id":"https://openalex.org/C70518039","wikidata":"https://www.wikidata.org/wiki/Q16000077","display_name":"Dimensionality reduction","level":2,"score":0.38359999656677246},{"id":"https://openalex.org/C86034646","wikidata":"https://www.wikidata.org/wiki/Q474311","display_name":"Semantic gap","level":4,"score":0.37470000982284546},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.3716999888420105},{"id":"https://openalex.org/C59732488","wikidata":"https://www.wikidata.org/wiki/Q2528440","display_name":"Visual analytics","level":3,"score":0.3531000018119812},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.35100001096725464},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3458000123500824},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.3407000005245209},{"id":"https://openalex.org/C99740376","wikidata":"https://www.wikidata.org/wiki/Q17092520","display_name":"Interactive visual analysis","level":4,"score":0.3319000005722046},{"id":"https://openalex.org/C64754055","wikidata":"https://www.wikidata.org/wiki/Q7574053","display_name":"Spatial contextual awareness","level":2,"score":0.32199999690055847},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.31380000710487366},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.31150001287460327},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.28110000491142273},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.27730000019073486},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.2759999930858612},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.2741999924182892},{"id":"https://openalex.org/C159620131","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Spatial analysis","level":2,"score":0.265500009059906},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.26499998569488525},{"id":"https://openalex.org/C138958017","wikidata":"https://www.wikidata.org/wiki/Q190087","display_name":"Data type","level":2,"score":0.26260000467300415},{"id":"https://openalex.org/C205711294","wikidata":"https://www.wikidata.org/wiki/Q176953","display_name":"Rendering (computer graphics)","level":2,"score":0.2612000107765198},{"id":"https://openalex.org/C153715457","wikidata":"https://www.wikidata.org/wiki/Q254183","display_name":"Augmented reality","level":2,"score":0.25270000100135803}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/tvcg.2025.3634794","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2025.3634794","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},{"id":"pmid:41379922","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41379922","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on visualization and computer graphics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:13130870","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13130870/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Vis Comput Graph","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:13130870","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13130870/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Vis Comput Graph","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6112438969","display_name":null,"funder_award_id":"U01-CA284207","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7703582785","display_name":null,"funder_award_id":"R01HD104969","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":79,"referenced_works":["https://openalex.org/W1483072991","https://openalex.org/W1973012451","https://openalex.org/W1974767305","https://openalex.org/W1977575535","https://openalex.org/W1992613028","https://openalex.org/W1998947504","https://openalex.org/W2001141328","https://openalex.org/W2012343510","https://openalex.org/W2022470997","https://openalex.org/W2043508111","https://openalex.org/W2065277086","https://openalex.org/W2071584957","https://openalex.org/W2075121582","https://openalex.org/W2149472792","https://openalex.org/W2152621157","https://openalex.org/W2159205441","https://openalex.org/W2294798173","https://openalex.org/W2467197661","https://openalex.org/W2473098174","https://openalex.org/W2516809705","https://openalex.org/W2610797810","https://openalex.org/W2743344672","https://openalex.org/W2752662042","https://openalex.org/W2772496691","https://openalex.org/W2832881433","https://openalex.org/W2856718477","https://openalex.org/W2902652978","https://openalex.org/W2958874938","https://openalex.org/W2964691289","https://openalex.org/W2969396217","https://openalex.org/W2972845140","https://openalex.org/W2976162071","https://openalex.org/W2981104165","https://openalex.org/W2986308225","https://openalex.org/W2995755016","https://openalex.org/W3007705297","https://openalex.org/W3034069517","https://openalex.org/W3115215810","https://openalex.org/W3127452014","https://openalex.org/W3166610563","https://openalex.org/W3174698231","https://openalex.org/W3186838184","https://openalex.org/W3197209004","https://openalex.org/W3200692557","https://openalex.org/W3201911076","https://openalex.org/W3202214644","https://openalex.org/W3204857299","https://openalex.org/W3217102738","https://openalex.org/W3217171064","https://openalex.org/W4220924308","https://openalex.org/W4225563096","https://openalex.org/W4226108798","https://openalex.org/W4281628079","https://openalex.org/W4284970411","https://openalex.org/W4288079959","https://openalex.org/W4292183618","https://openalex.org/W4297964933","https://openalex.org/W4307715791","https://openalex.org/W4309326436","https://openalex.org/W4312765319","https://openalex.org/W4317434093","https://openalex.org/W4381104246","https://openalex.org/W4385571801","https://openalex.org/W4386898835","https://openalex.org/W4387885708","https://openalex.org/W4388286168","https://openalex.org/W4388286222","https://openalex.org/W4389988539","https://openalex.org/W4393171206","https://openalex.org/W4399491764","https://openalex.org/W4402363843","https://openalex.org/W4402401769","https://openalex.org/W4402742912","https://openalex.org/W4402926830","https://openalex.org/W4403526447","https://openalex.org/W4403665808","https://openalex.org/W4403921225","https://openalex.org/W4404724573","https://openalex.org/W4414603852"],"related_works":[],"abstract_inverted_index":{"Dimensionality":[0],"reduction":[1],"techniques":[2,32],"help":[3],"analysts":[4,99],"make":[5],"sense":[6],"of":[7,120,127,129,137,158,203,215,248],"complex,":[8],"high-dimensional":[9,89,249],"spatial":[10,71,114,122],"datasets,":[11,250],"such":[12],"as":[13,228],"multiplexed":[14],"tissue":[15,190],"imaging,":[16],"satellite":[17],"imagery,":[18],"and":[19,39,44,68,83,103,112,124,182,201,254],"astronomical":[20],"observations,":[21],"by":[22],"projecting":[23],"data":[24,206],"attributes":[25],"into":[26,219],"a":[27,76,117,141,193,198,229],"two-dimensional":[28],"space.":[29],"However,":[30],"these":[31,49],"typically":[33],"abstract":[34,65],"away":[35],"crucial":[36],"spatial,":[37],"positional,":[38],"morphological":[40,84,125],"contexts,":[41],"complicating":[42],"interpretation":[43],"limiting":[45],"insights.":[46],"To":[47,131],"address":[48],"limitations,":[50],"we":[51],"present":[52],"SEAL,":[53],"an":[54,208,241],"interactive":[55,242],"visual":[56],"analytics":[57],"system":[58],"designed":[59],"to":[60,100,145],"bridge":[61],"the":[62,110,121,151,156,213],"gap":[63],"between":[64,134],"2D":[66],"embeddings":[67],"their":[69],"rich":[70],"imaging":[72,225],"context.":[73],"SEAL":[74,97,139,239],"introduces":[75],"novel":[77],"hybrid-embedding":[78],"visualization":[79,95],"that":[80],"preserves":[81],"image":[82,217],"information":[85],"while":[86,232],"integrating":[87,216,234],"critical":[88],"feature":[90,147],"data.":[91],"By":[92],"adapting":[93],"set":[94,172],"methods,":[96],"allows":[98],"identify,":[101],"visualize,":[102],"compare":[104],"selections-defined":[105],"manually":[106],"or":[107],"algorithmically-in":[108],"both":[109],"embedding":[111,220],"original":[113],"views,":[115],"facilitating":[116],"deeper":[118],"understanding":[119],"arrangement":[123],"characteristics":[126],"entities":[128],"interest.":[130],"elucidate":[132],"differences":[133],"selected":[135],"sets":[136],"items,":[138],"employs":[140],"scalable":[142],"surrogate":[143],"model":[144],"calculate":[146],"importance":[148,163,214],"scores,":[149],"identifying":[150],"most":[152],"influential":[153],"features":[154],"governing":[155],"position":[157],"objects":[159],"within":[160],"embeddings.":[161],"These":[162,210],"scores":[164],"are":[165],"visually":[166],"summarized":[167],"across":[168],"selections,":[169],"with":[170,192,197,207,236],"mathematical":[171],"operations":[173],"enabling":[174],"detailed":[175],"comparative":[176],"analyses.":[177],"We":[178],"demonstrate":[179],"SEAL's":[180],"effectiveness":[181],"versatility":[183],"through":[184],"three":[185],"case":[186],"studies:":[187],"colorectal":[188],"cancer":[189],"analysis":[191],"pharmacologist,":[194],"melanoma":[195],"investigation":[196],"cell":[199],"biologist,":[200],"exploration":[202,247],"sky":[204],"survey":[205],"astronomer.":[209],"studies":[211],"underscore":[212],"context":[218],"spaces":[221],"when":[222],"interpreting":[223],"complex":[224],"datasets.":[226],"Implemented":[227],"standalone":[230],"tool":[231],"also":[233],"seamlessly":[235],"computational":[237],"notebooks,":[238],"provides":[240],"platform":[243],"for":[244],"spatially":[245],"informed":[246],"significantly":[251],"enhancing":[252],"interpretability":[253],"insight":[255],"generation.":[256]},"counts_by_year":[],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-12-11T00:00:00"}
