{"id":"https://openalex.org/W4402389389","doi":"https://doi.org/10.1109/tvcg.2024.3456406","title":"Cell2Cell: Explorative Cell Interaction Analysis in Multi-Volumetric Tissue Data","display_name":"Cell2Cell: Explorative Cell Interaction Analysis in Multi-Volumetric Tissue Data","publication_year":2024,"publication_date":"2024-09-10","ids":{"openalex":"https://openalex.org/W4402389389","doi":"https://doi.org/10.1109/tvcg.2024.3456406","pmid":"https://pubmed.ncbi.nlm.nih.gov/39255170"},"language":"en","primary_location":{"id":"doi:10.1109/tvcg.2024.3456406","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tvcg.2024.3456406","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1109/tvcg.2024.3456406","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072912898","display_name":"Eric M\u00f6rth","orcid":"https://orcid.org/0000-0003-1625-0146"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Eric M\u00f6rth","raw_affiliation_strings":["Harvard Medical School, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092528206","display_name":"Kevin Sidak","orcid":null},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Kevin Sidak","raw_affiliation_strings":["Doctoral School of Computer Science at the University of Vienna, Austria","Faculty of Computer Science and the Research Network Data Science, the University of Vienna, Austria"],"affiliations":[{"raw_affiliation_string":"Doctoral School of Computer Science at the University of Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]},{"raw_affiliation_string":"Faculty of Computer Science and the Research Network Data Science, the University of Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030146315","display_name":"Zoltan Maliga","orcid":"https://orcid.org/0000-0003-4209-7253"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zoltan Maliga","raw_affiliation_strings":["Harvard Medical School, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060664606","display_name":"Torsten M\u00f6ller","orcid":"https://orcid.org/0000-0003-1192-0710"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]},{"id":"https://openalex.org/I4210165591","display_name":"Network Group (Czechia)","ror":"https://ror.org/055hmgs82","country_code":"CZ","type":"company","lineage":["https://openalex.org/I4210165591"]}],"countries":["AT","CZ"],"is_corresponding":false,"raw_author_name":"Torsten M\u00f6ller","raw_affiliation_strings":["Faculty of Computer Science and the Research Network Data Science at the University of Vienna, Austria","Faculty of Computer Science and the Research Network Data Science, the University of Vienna, Austria"],"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and the Research Network Data Science at the University of Vienna, Austria","institution_ids":["https://openalex.org/I4210165591"]},{"raw_affiliation_string":"Faculty of Computer Science and the Research Network Data Science, the University of Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066335313","display_name":"Nils Gehlenborg","orcid":"https://orcid.org/0000-0003-0327-8297"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nils Gehlenborg","raw_affiliation_strings":["Harvard Medical School, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063426870","display_name":"Peter K. Sorger","orcid":"https://orcid.org/0000-0002-3364-1838"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Sorger","raw_affiliation_strings":["Harvard Medical School, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043151044","display_name":"Hanspeter Pfister","orcid":"https://orcid.org/0000-0002-3620-2582"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanspeter Pfister","raw_affiliation_strings":["Harvard University, USA"],"affiliations":[{"raw_affiliation_string":"Harvard University, USA","institution_ids":["https://openalex.org/I2801851002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010238198","display_name":"Johanna Beyer","orcid":"https://orcid.org/0000-0002-3505-9171"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Johanna Beyer","raw_affiliation_strings":["Harvard University, USA"],"affiliations":[{"raw_affiliation_string":"Harvard University, USA","institution_ids":["https://openalex.org/I2801851002"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113517476","display_name":"Robert A. Kruger","orcid":null},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Kr\u00fcger","raw_affiliation_strings":["New York University (NYU), USA"],"affiliations":[{"raw_affiliation_string":"New York University (NYU), USA","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5072912898"],"corresponding_institution_ids":["https://openalex.org/I136199984"],"apc_list":null,"apc_paid":null,"fwci":2.5911,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90239663,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"31","issue":"1","first_page":"569","last_page":"579"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9336000084877014,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9336000084877014,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.750603437423706},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5154427289962769},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5048359036445618},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.4583861231803894},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2883504629135132}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.750603437423706},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5154427289962769},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5048359036445618},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.4583861231803894},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2883504629135132}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1109/tvcg.2024.3456406","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tvcg.2024.3456406","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},{"id":"pmid:39255170","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39255170","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on visualization and computer graphics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11875984","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11875984","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11875984/pdf/nihms-2039888.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Vis Comput Graph","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1109/tvcg.2024.3456406","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tvcg.2024.3456406","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G1301381168","display_name":null,"funder_award_id":"U54CA268072","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3937140210","display_name":null,"funder_award_id":"R33CA263666","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3958418909","display_name":null,"funder_award_id":"U2CCA233262","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4369455635","display_name":null,"funder_award_id":"R50CA252138","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5090901529","display_name":null,"funder_award_id":"OT2OD033758","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5290126611","display_name":"III: Medium: Collaborative Research: Situated Visual Information Spaces","funder_award_id":"2107328","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6345853531","display_name":null,"funder_award_id":"unknown","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8079053953","display_name":null,"funder_award_id":"19-041","funder_id":"https://openalex.org/F4320321003","funder_display_name":"Vienna Science and Technology Fund"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8545415871","display_name":null,"funder_award_id":"1U01CA284207","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8605766284","display_name":null,"funder_award_id":"III-2107328","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320311496","display_name":"Ludwig Institute for Cancer Research","ror":"https://ror.org/05qdwtz81"},{"id":"https://openalex.org/F4320321003","display_name":"Vienna Science and Technology Fund","ror":"https://ror.org/01f9mc681"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1970569592","https://openalex.org/W1970754929","https://openalex.org/W1988312720","https://openalex.org/W2015159529","https://openalex.org/W2023098599","https://openalex.org/W2030246490","https://openalex.org/W2032938251","https://openalex.org/W2052577859","https://openalex.org/W2083841057","https://openalex.org/W2106474670","https://openalex.org/W2108713782","https://openalex.org/W2135415614","https://openalex.org/W2141569821","https://openalex.org/W2146983132","https://openalex.org/W2149386833","https://openalex.org/W2161133721","https://openalex.org/W2345057418","https://openalex.org/W2576554443","https://openalex.org/W2743344672","https://openalex.org/W2799553179","https://openalex.org/W2832881433","https://openalex.org/W2956831428","https://openalex.org/W2960572238","https://openalex.org/W2964691289","https://openalex.org/W2975634117","https://openalex.org/W2978705707","https://openalex.org/W3013273643","https://openalex.org/W3045012301","https://openalex.org/W3096780888","https://openalex.org/W3204857299","https://openalex.org/W3215932031","https://openalex.org/W4206471589","https://openalex.org/W4225563096","https://openalex.org/W4280610419","https://openalex.org/W4286462293","https://openalex.org/W4291138169","https://openalex.org/W4297964933","https://openalex.org/W4317434093","https://openalex.org/W4387986913","https://openalex.org/W6604828220","https://openalex.org/W6748287013","https://openalex.org/W6794503497"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2579659702","https://openalex.org/W2154046714","https://openalex.org/W1965329638","https://openalex.org/W1574055964","https://openalex.org/W2923661510","https://openalex.org/W2189613078","https://openalex.org/W2586219255","https://openalex.org/W2547096368"],"abstract_inverted_index":{"We":[0,115,193,222],"present":[1],"Cell2Cell,":[2],"a":[3,31,79,94,100,144,167,235],"novel":[4],"visual":[5],"analytics":[6],"approach":[7],"for":[8],"quantifying":[9,70],"and":[10,41,73,98,127,147,189,203,214,233,237],"visualizing":[11],"networks":[12],"of":[13,35,55,75,103,129,177,240],"cell-cell":[14,241],"interactions":[15,68,140],"in":[16,57,106,143,179,197,218],"three-dimensional":[17],"(3D)":[18],"multi-channel":[19,60,88],"cancerous":[20],"tissue":[21,80,220],"data.":[22,62,90,221],"By":[23,63],"analyzing":[24],"cellular":[25],"interactions,":[26],"biomedical":[27],"experts":[28,105,205],"can":[29,227],"gain":[30],"more":[32],"accurate":[33],"understanding":[34],"the":[36,53,71,107,124,130,134,149,230],"intricate":[37],"relationships":[38],"between":[39],"cancer":[40],"immune":[42],"cells.":[43],"Recent":[44],"methods":[45],"have":[46,93],"focused":[47],"on":[48,52],"inferring":[49],"interaction":[50],"based":[51],"proximity":[54],"cells":[56,186],"low-resolution":[58],"2D":[59],"imaging":[61],"contrast,":[64],"we":[65,137,165],"analyze":[66,148,174],"cell":[67,145,190],"by":[69],"presence":[72],"levels":[74],"specific":[76],"proteins":[77,178],"within":[78],"sample":[81],"(protein":[82,152],"expressions)":[83,153],"extracted":[84],"from":[85],"high-resolution":[86],"3D":[87],"volume":[89],"Such":[91],"analyses":[92],"strong":[95],"exploratory":[96],"nature":[97],"require":[99],"tight":[101],"integration":[102],"domain":[104],"analysis":[108,239],"loop":[109],"to":[110,121,172,208,212],"leverage":[111],"their":[112],"deep":[113],"knowledge.":[114],"propose":[116,166],"two":[117],"complementary":[118],"semi-automated":[119],"approaches":[120],"cope":[122],"with":[123,187],"increasing":[125],"size":[126],"complexity":[128],"data":[131],"interactively:":[132],"On":[133],"one":[135],"hand,":[136],"interpret":[138],"cell-to-cell":[139],"as":[141,159,161],"edges":[142],"graph":[146],"image":[150],"signal":[151],"along":[154],"those":[155],"edges,":[156],"using":[157],"spatial":[158],"well":[160],"abstract":[162],"visualizations.":[163],"Complementary,":[164],"cell-centered":[168],"approach,":[169],"enabling":[170],"scientists":[171],"visually":[173],"polarized":[175],"distributions":[176],"three":[180,198],"dimensions,":[181],"which":[182],"also":[183],"captures":[184],"neighboring":[185],"biochemical":[188],"biological":[191],"consequences.":[192],"evaluate":[194],"our":[195,225],"application":[196],"case":[199],"studies,":[200],"where":[201],"biologists":[202],"medical":[204],"use":[206,231],"Cell2Cell":[207],"investigate":[209],"tumor":[210],"micro-environments":[211],"identify":[213],"quantify":[215],"T-cell":[216],"activation":[217],"human":[219],"confirmed":[223],"that":[224],"tool":[226],"fully":[228],"solve":[229],"cases":[232],"enables":[234],"streamlined":[236],"detailed":[238],"interactions.":[242]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
