{"id":"https://openalex.org/W4402401877","doi":"https://doi.org/10.1109/tvcg.2024.3456193","title":"Aardvark: Composite Visualizations of Trees, Time-Series, and Images","display_name":"Aardvark: Composite Visualizations of Trees, Time-Series, and Images","publication_year":2024,"publication_date":"2024-09-10","ids":{"openalex":"https://openalex.org/W4402401877","doi":"https://doi.org/10.1109/tvcg.2024.3456193","pmid":"https://pubmed.ncbi.nlm.nih.gov/39255114"},"language":"en","primary_location":{"id":"doi:10.1109/tvcg.2024.3456193","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2024.3456193","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12143745/pdf/nihms-2083519.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001935193","display_name":"Devin Lange","orcid":"https://orcid.org/0000-0002-3467-0294"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Devin Lange","raw_affiliation_strings":["University of Utah, USA"],"raw_orcid":"https://orcid.org/0000-0002-3467-0294","affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038106228","display_name":"Robert L. Judson\u2010Torres","orcid":"https://orcid.org/0000-0002-6559-0553"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Judson-Torres","raw_affiliation_strings":["University of Utah, USA"],"raw_orcid":"https://orcid.org/0000-0002-6559-0553","affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020618568","display_name":"Thomas A. Zangle","orcid":"https://orcid.org/0000-0001-5899-3517"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas A. Zangle","raw_affiliation_strings":["University of Utah, USA"],"raw_orcid":"https://orcid.org/0000-0001-5899-3517","affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031057530","display_name":"Alexander Lex","orcid":"https://orcid.org/0000-0001-6930-5468"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Lex","raw_affiliation_strings":["University of Utah, USA"],"raw_orcid":"https://orcid.org/0000-0001-6930-5468","affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":0.9705,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.74324408,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"31","issue":"1","first_page":"1290","last_page":"1300"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9868999719619751,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9868999719619751,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7712701559066772},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6194155216217041},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.5958071947097778},{"id":"https://openalex.org/keywords/series","display_name":"Series (stratigraphy)","score":0.537281334400177},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5001528263092041},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28342992067337036},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08736220002174377}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7712701559066772},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6194155216217041},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.5958071947097778},{"id":"https://openalex.org/C143724316","wikidata":"https://www.wikidata.org/wiki/Q312468","display_name":"Series (stratigraphy)","level":2,"score":0.537281334400177},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5001528263092041},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28342992067337036},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08736220002174377},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/tvcg.2024.3456193","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2024.3456193","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},{"id":"pmid:39255114","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39255114","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on visualization and computer graphics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12143745","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12143745/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12143745/pdf/nihms-2083519.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Vis Comput Graph","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:11563255","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12143745","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:12143745","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12143745/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12143745/pdf/nihms-2083519.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Vis Comput Graph","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2991578257","display_name":null,"funder_award_id":"R01 CA276653","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3841404249","display_name":null,"funder_award_id":"P41EB031772","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G858682239","display_name":null,"funder_award_id":"P30CA042014","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4402401877.pdf"},"referenced_works_count":75,"referenced_works":["https://openalex.org/W1926682734","https://openalex.org/W1970569592","https://openalex.org/W1976443465","https://openalex.org/W2015449696","https://openalex.org/W2034346243","https://openalex.org/W2035324138","https://openalex.org/W2062937620","https://openalex.org/W2068408009","https://openalex.org/W2082992479","https://openalex.org/W2095846842","https://openalex.org/W2107554012","https://openalex.org/W2108962887","https://openalex.org/W2115365174","https://openalex.org/W2119245436","https://openalex.org/W2121815329","https://openalex.org/W2122601556","https://openalex.org/W2133706996","https://openalex.org/W2135415614","https://openalex.org/W2135638333","https://openalex.org/W2139442812","https://openalex.org/W2140610287","https://openalex.org/W2141281645","https://openalex.org/W2148151237","https://openalex.org/W2150926065","https://openalex.org/W2159367517","https://openalex.org/W2162894742","https://openalex.org/W2166753226","https://openalex.org/W2168705291","https://openalex.org/W2171575586","https://openalex.org/W2286660955","https://openalex.org/W2289495393","https://openalex.org/W2296493840","https://openalex.org/W2515839014","https://openalex.org/W2793263492","https://openalex.org/W2905015557","https://openalex.org/W2949239325","https://openalex.org/W2949383950","https://openalex.org/W2950237981","https://openalex.org/W2956831428","https://openalex.org/W2963910015","https://openalex.org/W2969366381","https://openalex.org/W2969940513","https://openalex.org/W2972184354","https://openalex.org/W2972845140","https://openalex.org/W3034223044","https://openalex.org/W3089140223","https://openalex.org/W3092465494","https://openalex.org/W3127631819","https://openalex.org/W3157033608","https://openalex.org/W3203109225","https://openalex.org/W3203255635","https://openalex.org/W3204857299","https://openalex.org/W3216562252","https://openalex.org/W4234618567","https://openalex.org/W4253595611","https://openalex.org/W4255822078","https://openalex.org/W4280610419","https://openalex.org/W4283207599","https://openalex.org/W4289443637","https://openalex.org/W4291138169","https://openalex.org/W4297094730","https://openalex.org/W4297458042","https://openalex.org/W4297458793","https://openalex.org/W4297964933","https://openalex.org/W4298724002","https://openalex.org/W4301392884","https://openalex.org/W4313494816","https://openalex.org/W4313525966","https://openalex.org/W4382461989","https://openalex.org/W4387952169","https://openalex.org/W4393004135","https://openalex.org/W4401934497","https://openalex.org/W4402926830","https://openalex.org/W6694143627","https://openalex.org/W6712785533"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2579659702","https://openalex.org/W2154046714","https://openalex.org/W1965329638","https://openalex.org/W1574055964","https://openalex.org/W2923661510","https://openalex.org/W2189613078","https://openalex.org/W2586219255","https://openalex.org/W2547096368"],"abstract_inverted_index":{"How":[0,9],"do":[1,10],"cancer":[2],"cells":[3,50],"grow,":[4],"divide,":[5],"proliferate,":[6],"and":[7,34,43,48,51,58,75,100,139,161,200],"die?":[8],"drugs":[11],"influence":[12],"these":[13,113,178,195],"processes?":[14],"These":[15],"are":[16,149],"difficult":[17],"questions":[18],"that":[19,157,168,176],"we":[20,129,188],"can":[21,62],"attempt":[22],"to":[23,46,115,180],"answer":[24],"with":[25],"a":[26,85,143,153,174,204],"combination":[27],"of":[28,41,54,112,120,192,194,206],"time-series":[29,137],"microscopy":[30],"experiments,":[31],"classification":[32],"algorithms,":[33],"data":[35,42,71,82,93,121,141,155,165,201],"visualization.":[36,145],"However,":[37,105],"collecting":[38],"this":[39,106,126],"type":[40,156],"applying":[44],"algorithms":[45],"segment":[47],"track":[49],"construct":[52],"lineages":[53],"proliferation":[55],"is":[56],"error-prone;":[57],"identifying":[59],"the":[60,77,110,117,159,163,190],"errors":[61],"be":[63],"challenging":[64,127],"since":[65],"it":[66],"often":[67],"requires":[68,109],"cross-checking":[69],"multiple":[70],"types.":[72],"Similarly,":[73],"analyzing":[74],"communicating":[76],"results":[78],"necessitates":[79],"synthesizing":[80],"different":[81],"types":[83,166],"into":[84,142,167],"single":[86],"narrative.":[87],"State-of-the-art":[88],"visualization":[89,183],"methods":[90],"for":[91,133,197],"such":[92],"use":[94],"independent":[95],"line":[96],"charts,":[97],"tree":[98,140],"diagrams,":[99],"images":[101],"in":[102,122,203],"separate":[103],"views.":[104],"spatial":[107],"separation":[108],"viewer":[111],"charts":[114],"combine":[116],"relevant":[118],"pieces":[119],"memory.":[123],"To":[124],"simplify":[125],"task,":[128],"describe":[130],"design":[131,147],"principles":[132,148,179],"weaving":[134],"cell":[135],"images,":[136],"data,":[138],"cohesive":[144],"Our":[146],"based":[150],"on":[151,186],"choosing":[152],"primary":[154],"drives":[158],"layout":[160],"integrates":[162],"other":[164],"layout.":[169],"We":[170],"then":[171],"introduce":[172],"Aardvark,":[173,187],"system":[175],"uses":[177],"implement":[181],"novel":[182],"techniques.":[184],"Based":[185],"demonstrate":[189],"utility":[191],"each":[193],"approaches":[196],"discovery,":[198],"communication,":[199],"debugging":[202],"series":[205],"case":[207],"studies.":[208]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
