{"id":"https://openalex.org/W4313525966","doi":"https://doi.org/10.1109/tvcg.2022.3233548","title":"MitoVis: A Unified Visual Analytics System for End-to-End Neuronal Mitochondria Analysis","display_name":"MitoVis: A Unified Visual Analytics System for End-to-End Neuronal Mitochondria Analysis","publication_year":2023,"publication_date":"2023-01-02","ids":{"openalex":"https://openalex.org/W4313525966","doi":"https://doi.org/10.1109/tvcg.2022.3233548"},"language":"en","primary_location":{"id":"doi:10.1109/tvcg.2022.3233548","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2022.3233548","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087518165","display_name":"Junyoung Choi","orcid":"https://orcid.org/0000-0002-4255-4402"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"JunYoung Choi","raw_affiliation_strings":["Department of Computer Science and Engineering, Korea University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University, Seoul, Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050493621","display_name":"Hyun-Jic Oh","orcid":null},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyun-Jic Oh","raw_affiliation_strings":["Department of Computer Science and Engineering, Korea University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University, Seoul, Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104581550","display_name":"Hakjun Lee","orcid":"https://orcid.org/0000-0002-2040-6564"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hakjun Lee","raw_affiliation_strings":["Department of Computer Science and Engineering, Korea University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University, Seoul, Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103919343","display_name":"Suyeon Kim","orcid":null},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I4210101891","display_name":"Korea Institute of Brain Science","ror":"https://ror.org/017stnw60","country_code":"KR","type":"facility","lineage":["https://openalex.org/I4210101891"]},{"id":"https://openalex.org/I4210140519","display_name":"Korean Association Of Science and Technology Studies","ror":"https://ror.org/04qh86j58","country_code":"KR","type":"other","lineage":["https://openalex.org/I4210140519"]},{"id":"https://openalex.org/I58716616","display_name":"Korea Institute of Science and Technology","ror":"https://ror.org/05kzfa883","country_code":"KR","type":"facility","lineage":["https://openalex.org/I27494661","https://openalex.org/I2801339556","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098","https://openalex.org/I4387152098","https://openalex.org/I58716616"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Suyeon Kim","raw_affiliation_strings":["Brain Science Institute, Korea Institute of Science and Technology, Seoul, Korea","Korea University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Brain Science Institute, Korea Institute of Science and Technology, Seoul, Korea","institution_ids":["https://openalex.org/I4210101891","https://openalex.org/I58716616","https://openalex.org/I4210140519"]},{"raw_affiliation_string":"Korea University, Seoul, Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054325220","display_name":"Seok\u2010Kyu Kwon","orcid":"https://orcid.org/0000-0002-7280-9867"},"institutions":[{"id":"https://openalex.org/I4210101891","display_name":"Korea Institute of Brain Science","ror":"https://ror.org/017stnw60","country_code":"KR","type":"facility","lineage":["https://openalex.org/I4210101891"]},{"id":"https://openalex.org/I4210140519","display_name":"Korean Association Of Science and Technology Studies","ror":"https://ror.org/04qh86j58","country_code":"KR","type":"other","lineage":["https://openalex.org/I4210140519"]},{"id":"https://openalex.org/I58716616","display_name":"Korea Institute of Science and Technology","ror":"https://ror.org/05kzfa883","country_code":"KR","type":"facility","lineage":["https://openalex.org/I27494661","https://openalex.org/I2801339556","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098","https://openalex.org/I4387152098","https://openalex.org/I58716616"]},{"id":"https://openalex.org/I88761825","display_name":"Korea University of Science and Technology","ror":"https://ror.org/000qzf213","country_code":"KR","type":"education","lineage":["https://openalex.org/I88761825"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Seok-Kyu Kwon","raw_affiliation_strings":["Brain Science Institute, Korea Institute of Science and Technology, Seoul, Korea","University of Science and Technology, Korea"],"affiliations":[{"raw_affiliation_string":"Brain Science Institute, Korea Institute of Science and Technology, Seoul, Korea","institution_ids":["https://openalex.org/I4210101891","https://openalex.org/I58716616","https://openalex.org/I4210140519"]},{"raw_affiliation_string":"University of Science and Technology, Korea","institution_ids":["https://openalex.org/I88761825"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025485089","display_name":"Won\u2010Ki Jeong","orcid":"https://orcid.org/0000-0002-9393-6451"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Won-Ki Jeong","raw_affiliation_strings":["Department of Computer Science and Engineering, Korea University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Korea University, Seoul, Korea","institution_ids":["https://openalex.org/I197347611"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5087518165"],"corresponding_institution_ids":["https://openalex.org/I197347611"],"apc_list":null,"apc_paid":null,"fwci":2.4993,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.8925711,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"30","issue":"7","first_page":"3457","last_page":"3473"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11307","display_name":"Domain Adaptation and Few-Shot Learning","score":0.958899974822998,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9376999735832214,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7289799451828003},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5422691702842712},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5362839698791504},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.521128237247467},{"id":"https://openalex.org/keywords/proofreading","display_name":"Proofreading","score":0.5040799379348755},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4244599938392639},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.22825777530670166},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14508056640625}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7289799451828003},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5422691702842712},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5362839698791504},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.521128237247467},{"id":"https://openalex.org/C170748874","wikidata":"https://www.wikidata.org/wiki/Q21117977","display_name":"Proofreading","level":4,"score":0.5040799379348755},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4244599938392639},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.22825777530670166},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14508056640625},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C82381507","wikidata":"https://www.wikidata.org/wiki/Q416878","display_name":"Polymerase","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tvcg.2022.3233548","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2022.3233548","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.7200000286102295}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":68,"referenced_works":["https://openalex.org/W1510655293","https://openalex.org/W1544426692","https://openalex.org/W1892910671","https://openalex.org/W1901129140","https://openalex.org/W1965819088","https://openalex.org/W1969963182","https://openalex.org/W1971993655","https://openalex.org/W1989396876","https://openalex.org/W2032191478","https://openalex.org/W2037075564","https://openalex.org/W2037586865","https://openalex.org/W2039172345","https://openalex.org/W2056433085","https://openalex.org/W2089141103","https://openalex.org/W2105604713","https://openalex.org/W2109418048","https://openalex.org/W2119577952","https://openalex.org/W2133103790","https://openalex.org/W2163314583","https://openalex.org/W2260239598","https://openalex.org/W2269336718","https://openalex.org/W2346062110","https://openalex.org/W2597050312","https://openalex.org/W2606718169","https://openalex.org/W2618167249","https://openalex.org/W2625554823","https://openalex.org/W2625559849","https://openalex.org/W2741430196","https://openalex.org/W2744478946","https://openalex.org/W2750023899","https://openalex.org/W2750714283","https://openalex.org/W2763148304","https://openalex.org/W2786672974","https://openalex.org/W2802659332","https://openalex.org/W2824561939","https://openalex.org/W2884585775","https://openalex.org/W2886049744","https://openalex.org/W2899231248","https://openalex.org/W2905361879","https://openalex.org/W2907315139","https://openalex.org/W2911066482","https://openalex.org/W2947115013","https://openalex.org/W2949642444","https://openalex.org/W2969366381","https://openalex.org/W2972845140","https://openalex.org/W2972857012","https://openalex.org/W2977942577","https://openalex.org/W2980746109","https://openalex.org/W2989219518","https://openalex.org/W2992843368","https://openalex.org/W2998965814","https://openalex.org/W3003394141","https://openalex.org/W3080232649","https://openalex.org/W3085411216","https://openalex.org/W3086977165","https://openalex.org/W3089134597","https://openalex.org/W3099188459","https://openalex.org/W3122412340","https://openalex.org/W3135265344","https://openalex.org/W3164152314","https://openalex.org/W3164697193","https://openalex.org/W3197085354","https://openalex.org/W3202623927","https://openalex.org/W4224241870","https://openalex.org/W4295312788","https://openalex.org/W6748816842","https://openalex.org/W6766978945","https://openalex.org/W6776700526"],"related_works":["https://openalex.org/W2368857380","https://openalex.org/W2372371860","https://openalex.org/W2377652655","https://openalex.org/W2374253084","https://openalex.org/W2384263329","https://openalex.org/W2371992853","https://openalex.org/W2348699276","https://openalex.org/W2087847877","https://openalex.org/W2375918888","https://openalex.org/W2349157076"],"abstract_inverted_index":{"Neurons":[0],"have":[1,21,58],"a":[2,75,84,117,139],"polarized":[3],"structure,":[4],"with":[5,181],"dendrites":[6],"and":[7,9,36,50,96,125,175,188],"axons,":[8],"compartment-specific":[10],"functions":[11,33],"can":[12,89,172],"be":[13],"affected":[14],"by":[15,197],"the":[16,24,32,40,69,81,93,130,154,179,186,191,215,220],"dwelling":[17],"mitochondria.":[18,134],"Recent":[19],"studies":[20,195],"shown":[22],"that":[23,170,202],"morphology":[25,131],"of":[26,34,71,83,129,132,153,190],"mitochondria":[27,42,64],"is":[28],"closely":[29],"related":[30],"to":[31,208,219],"neurons":[35],"neurodegenerative":[37],"diseases.":[38],"However,":[39],"conventional":[41,221],"analysis":[43,65,77,128,212,223],"workflow":[44],"mainly":[45],"relies":[46],"on":[47,92,145],"manual":[48,222],"annotations":[49],"generic":[51],"image-processing":[52],"software.":[53],"Moreover,":[54],"even":[55],"though":[56],"there":[57,97],"been":[59],"recent":[60,146],"developments":[61],"in":[62,74,101,178,214],"automatic":[63],"using":[66],"deep":[67,86],"learning,":[68,148],"application":[70],"existing":[72],"methods":[73],"daily":[76],"remains":[78],"challenging":[79],"because":[80],"performance":[82],"pretrained":[85],"learning":[87,142],"model":[88],"vary":[90],"depending":[91],"target":[94],"data,":[95],"are":[98],"always":[99],"errors":[100,177],"inference":[102],"time,":[103],"requiring":[104],"human":[105],"proofreading.":[106],"To":[107],"address":[108],"these":[109],"issues,":[110],"we":[111],"introduce":[112],"<monospace":[113,135,158,203],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[114,136,159,204],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">MitoVis</monospace>":[115,137,160,205],",":[116],"novel":[118,140,163],"visualization":[119],"system":[120,192],"for":[121,166],"end-to-end":[122],"data":[123],"processing":[124],"an":[126],"interactive":[127,167],"neuronal":[133],"introduces":[138],"active":[141],"framework":[143],"based":[144],"contrastive":[147],"which":[149],"allows":[150],"accurate":[151],"fine-tuning":[152],"neural":[155],"network":[156],"model.":[157],"also":[161],"provides":[162],"visual":[164],"guides":[165],"proofreading":[168],"so":[169],"users":[171],"quickly":[173],"identify":[174],"correct":[176],"result":[180],"minimal":[182],"effort.":[183],"We":[184],"demonstrate":[185],"usefulness":[187],"efficacy":[189],"via":[193],"case":[194,216],"conducted":[196],"neuroscientists.":[198],"The":[199],"results":[200],"show":[201],"achieved":[206],"up":[207],"13.3\u00d7":[209],"faster":[210],"total":[211],"time":[213],"study":[217],"compared":[218],"workflow.":[224]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}