{"id":"https://openalex.org/W2515839014","doi":"https://doi.org/10.1109/tvcg.2016.2598587","title":"Screenit: Visual Analysis of Cellular Screens","display_name":"Screenit: Visual Analysis of Cellular Screens","publication_year":2016,"publication_date":"2016-08-10","ids":{"openalex":"https://openalex.org/W2515839014","doi":"https://doi.org/10.1109/tvcg.2016.2598587","mag":"2515839014","pmid":"https://pubmed.ncbi.nlm.nih.gov/27875174"},"language":"en","primary_location":{"id":"doi:10.1109/tvcg.2016.2598587","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2016.2598587","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022287420","display_name":"Kasper Dinkla","orcid":"https://orcid.org/0000-0003-2092-166X"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kasper Dinkla","raw_affiliation_strings":["Harvard University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard University","institution_ids":["https://openalex.org/I2801851002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084459196","display_name":"Hendrik Strobelt","orcid":"https://orcid.org/0000-0002-8995-1683"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hendrik Strobelt","raw_affiliation_strings":["Harvard University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard University","institution_ids":["https://openalex.org/I2801851002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057953221","display_name":"Bryan Genest","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091341","display_name":"Novartis (China)","ror":"https://ror.org/00fxgea47","country_code":"CN","type":"company","lineage":["https://openalex.org/I1283582996","https://openalex.org/I4210091341"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bryan Genest","raw_affiliation_strings":["Novartis Institute of BioMedical Research"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Novartis Institute of BioMedical Research","institution_ids":["https://openalex.org/I4210091341"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083912451","display_name":"Stephan Reiling","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091341","display_name":"Novartis (China)","ror":"https://ror.org/00fxgea47","country_code":"CN","type":"company","lineage":["https://openalex.org/I1283582996","https://openalex.org/I4210091341"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Stephan Reiling","raw_affiliation_strings":["Novartis Institute of BioMedical Research"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Novartis Institute of BioMedical Research","institution_ids":["https://openalex.org/I4210091341"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001741248","display_name":"Mark L. Borowsky","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091341","display_name":"Novartis (China)","ror":"https://ror.org/00fxgea47","country_code":"CN","type":"company","lineage":["https://openalex.org/I1283582996","https://openalex.org/I4210091341"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mark Borowsky","raw_affiliation_strings":["Novartis Institute of BioMedical Research"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Novartis Institute of BioMedical Research","institution_ids":["https://openalex.org/I4210091341"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043151044","display_name":"Hanspeter Pfister","orcid":"https://orcid.org/0000-0002-3620-2582"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanspeter Pfister","raw_affiliation_strings":["Harvard University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard University","institution_ids":["https://openalex.org/I2801851002"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.0015,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.87411743,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"23","issue":"1","first_page":"591","last_page":"600"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9451000094413757,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7967172265052795},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7704424858093262},{"id":"https://openalex.org/keywords/high-content-screening","display_name":"High-content screening","score":0.6770925521850586},{"id":"https://openalex.org/keywords/hierarchy","display_name":"Hierarchy","score":0.589505672454834},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5832464694976807},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.5428597331047058},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5187949538230896},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5158597826957703},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5096447467803955},{"id":"https://openalex.org/keywords/multivariate-statistics","display_name":"Multivariate statistics","score":0.4909508526325226},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.48389896750450134},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4288485646247864},{"id":"https://openalex.org/keywords/interactive-visual-analysis","display_name":"Interactive visual analysis","score":0.42048317193984985},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3108179569244385},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.28740108013153076},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2350056767463684},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1385246217250824},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10186880826950073}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7967172265052795},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7704424858093262},{"id":"https://openalex.org/C157044486","wikidata":"https://www.wikidata.org/wiki/Q5754482","display_name":"High-content screening","level":3,"score":0.6770925521850586},{"id":"https://openalex.org/C31170391","wikidata":"https://www.wikidata.org/wiki/Q188619","display_name":"Hierarchy","level":2,"score":0.589505672454834},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5832464694976807},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.5428597331047058},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5187949538230896},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5158597826957703},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5096447467803955},{"id":"https://openalex.org/C161584116","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate statistics","level":2,"score":0.4909508526325226},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.48389896750450134},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4288485646247864},{"id":"https://openalex.org/C99740376","wikidata":"https://www.wikidata.org/wiki/Q17092520","display_name":"Interactive visual analysis","level":4,"score":0.42048317193984985},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3108179569244385},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.28740108013153076},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2350056767463684},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1385246217250824},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10186880826950073},{"id":"https://openalex.org/C34447519","wikidata":"https://www.wikidata.org/wiki/Q179522","display_name":"Market economy","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tvcg.2016.2598587","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tvcg.2016.2598587","pdf_url":null,"source":{"id":"https://openalex.org/S84775595","display_name":"IEEE Transactions on Visualization and Computer Graphics","issn_l":"1077-2626","issn":["1077-2626","1941-0506","2160-9306"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Visualization and Computer Graphics","raw_type":"journal-article"},{"id":"pmid:27875174","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27875174","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on visualization and computer graphics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7293627511","display_name":null,"funder_award_id":"FA8750-12-C-0300","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"}],"funders":[{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320338294","display_name":"Air Force Research Laboratory","ror":"https://ror.org/02e2egq70"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W73593153","https://openalex.org/W1551726322","https://openalex.org/W1596413280","https://openalex.org/W1939253650","https://openalex.org/W1951995880","https://openalex.org/W1965102791","https://openalex.org/W1966087765","https://openalex.org/W1970569592","https://openalex.org/W1978659230","https://openalex.org/W1981119726","https://openalex.org/W1994267509","https://openalex.org/W2007241592","https://openalex.org/W2010058478","https://openalex.org/W2013131338","https://openalex.org/W2025806111","https://openalex.org/W2055034152","https://openalex.org/W2064657914","https://openalex.org/W2073752235","https://openalex.org/W2078295062","https://openalex.org/W2080417696","https://openalex.org/W2091781764","https://openalex.org/W2101234009","https://openalex.org/W2107554012","https://openalex.org/W2114033855","https://openalex.org/W2115556748","https://openalex.org/W2118660081","https://openalex.org/W2119019944","https://openalex.org/W2121815329","https://openalex.org/W2125121861","https://openalex.org/W2128026414","https://openalex.org/W2130561514","https://openalex.org/W2134678736","https://openalex.org/W2134709447","https://openalex.org/W2139442812","https://openalex.org/W2147468287","https://openalex.org/W2153283070","https://openalex.org/W2157171383","https://openalex.org/W2162446989","https://openalex.org/W2171073562","https://openalex.org/W2181616869","https://openalex.org/W2187089797","https://openalex.org/W2286660955","https://openalex.org/W2403580177","https://openalex.org/W6675354045","https://openalex.org/W6685764666"],"related_works":["https://openalex.org/W4367333290","https://openalex.org/W2126585434","https://openalex.org/W2801629698","https://openalex.org/W2116732611","https://openalex.org/W2085846955","https://openalex.org/W2143428259","https://openalex.org/W3149127250","https://openalex.org/W2158984754","https://openalex.org/W4390642479","https://openalex.org/W4246764483"],"abstract_inverted_index":{"High-throughput":[0],"and":[1,86,95,111],"high-content":[2],"screening":[3,80,146],"enables":[4,83],"large":[5,28],"scale,":[6],"cost-effective":[7],"experiments":[8],"in":[9,41,59,76],"which":[10],"cell":[11,57,107,117,163],"cultures":[12,58,118],"are":[13,47],"exposed":[14],"to":[15,66,142],"a":[16,27,71,152],"wide":[17],"spectrum":[18],"of":[19,36,43,61,88,99,106,114,129,145],"drugs.":[20],"The":[21,33,52],"resulting":[22],"multivariate":[23,89],"data":[24,90,154],"sets":[25],"have":[26],"but":[29],"shallow":[30],"hierarchical":[31],"structure.":[32],"deepest":[34],"level":[35,54],"this":[37],"structure":[38],"describes":[39,55],"cells":[40,160],"terms":[42,60],"numeric":[44],"features":[45],"that":[46,131,139],"derived":[48],"from":[49],"image":[50],"data.":[51],"subsequent":[53],"enveloping":[56],"imposed":[62],"experiment":[63],"conditions":[64],"(exposure":[65],"drugs).":[67],"We":[68,148],"present":[69],"Screenit,":[70],"visual":[72],"analysis":[73,87],"approach":[74],"designed":[75,141],"close":[77],"collaboration":[78],"with":[79,157],"experts.":[81,147],"Screenit":[82,101],"the":[84,103,112,127],"navigation":[85],"at":[91,96],"multiple":[92,97],"hierarchy":[93],"levels":[94,98],"detail.":[100],"integrates":[102],"interactive":[104],"modeling":[105],"physical":[108],"states":[109],"(phenotypes)":[110],"effects":[113],"drugs":[115],"on":[116],"(hits).":[119],"In":[120],"addition,":[121],"quality":[122],"control":[123],"is":[124,140],"enabled":[125],"via":[126],"detection":[128],"anomalies":[130],"indicate":[132],"low-quality":[133],"data,":[134],"while":[135],"providing":[136],"an":[137],"interface":[138],"match":[143],"workflows":[144],"demonstrate":[149],"analyses":[150],"for":[151],"real-world":[153],"set,":[155],"CellMorph,":[156],"6":[158],"million":[159],"across":[161],"20,000":[162],"cultures.":[164]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
