{"id":"https://openalex.org/W2155410786","doi":"https://doi.org/10.1109/tsp.2010.2065226","title":"Bayesian Peptide Peak Detection for High Resolution TOF Mass Spectrometry","display_name":"Bayesian Peptide Peak Detection for High Resolution TOF Mass Spectrometry","publication_year":2010,"publication_date":"2010-08-18","ids":{"openalex":"https://openalex.org/W2155410786","doi":"https://doi.org/10.1109/tsp.2010.2065226","mag":"2155410786","pmid":"https://pubmed.ncbi.nlm.nih.gov/21544266"},"language":"en","primary_location":{"id":"doi:10.1109/tsp.2010.2065226","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsp.2010.2065226","pdf_url":null,"source":{"id":"https://openalex.org/S168680287","display_name":"IEEE Transactions on Signal Processing","issn_l":"1053-587X","issn":["1053-587X","1941-0476"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Signal Processing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3085289","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087249630","display_name":"Jianqiu Zhang","orcid":"https://orcid.org/0000-0002-5220-3200"},"institutions":[{"id":"https://openalex.org/I45438204","display_name":"The University of Texas at San Antonio","ror":"https://ror.org/01kd65564","country_code":"US","type":"education","lineage":["https://openalex.org/I45438204"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jianqiu Zhang","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Texas at San Antonio, TX 78249 USA","Department of Electrical and Computer Engineering, University of Texas, San Antonio, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Texas at San Antonio, TX 78249 USA","institution_ids":[]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Texas, San Antonio, TX, USA","institution_ids":["https://openalex.org/I45438204"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053033228","display_name":"Xiaobo Zhou","orcid":"https://orcid.org/0000-0002-7127-2869"},"institutions":[{"id":"https://openalex.org/I4210109259","display_name":"Methodist Hospital","ror":"https://ror.org/01r5p9y80","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2802827176","https://openalex.org/I4210109259"]},{"id":"https://openalex.org/I1295876152","display_name":"Houston Methodist","ror":"https://ror.org/027zt9171","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1295876152"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaobo Zhou","raw_affiliation_strings":["Texas Methodist Hospital Research Institute, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Texas Methodist Hospital Research Institute, Houston, TX, USA","institution_ids":["https://openalex.org/I1295876152","https://openalex.org/I4210109259"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100682145","display_name":"Honghui Wang","orcid":"https://orcid.org/0000-0002-2134-8968"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Honghui Wang","raw_affiliation_strings":["Critical Care Medicine Department Clinical Center, National Institutes of Health DHHS, Bethesda, MD, USA"],"affiliations":[{"raw_affiliation_string":"Critical Care Medicine Department Clinical Center, National Institutes of Health DHHS, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025157938","display_name":"Anthony F. Suffredini","orcid":"https://orcid.org/0000-0003-4179-0902"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anthony Suffredini","raw_affiliation_strings":["Critical Care Medicine Department Clinical Center, National Institutes of Health DHHS, Bethesda, MD, USA"],"affiliations":[{"raw_affiliation_string":"Critical Care Medicine Department Clinical Center, National Institutes of Health DHHS, Bethesda, MD, USA","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100628318","display_name":"Zhang Lin","orcid":"https://orcid.org/0000-0002-6600-2055"},"institutions":[{"id":"https://openalex.org/I25757504","display_name":"China University of Mining and Technology","ror":"https://ror.org/01xt2dr21","country_code":"CN","type":"education","lineage":["https://openalex.org/I25757504"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Zhang","raw_affiliation_strings":["School of Information and Electric Engineering, China University of Mining and Technology, Xuzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Information and Electric Engineering, China University of Mining and Technology, Xuzhou, China","institution_ids":["https://openalex.org/I25757504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068887242","display_name":"Yufei Huang","orcid":"https://orcid.org/0000-0001-6268-5357"},"institutions":[{"id":"https://openalex.org/I165951966","display_name":"The University of Texas Health Science Center at San Antonio","ror":"https://ror.org/02f6dcw23","country_code":"US","type":"education","lineage":["https://openalex.org/I165951966"]},{"id":"https://openalex.org/I45438204","display_name":"The University of Texas at San Antonio","ror":"https://ror.org/01kd65564","country_code":"US","type":"education","lineage":["https://openalex.org/I45438204"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yufei Huang","raw_affiliation_strings":["Childrens Cancer Research Institute, Department of Epidemiology and Biostatistics, University of Texas Health Sciences Center, San Antonio, San Antonio, TX, USA","Department of Electrical and Computer Engineering, University of Texas, San Antonio, TX, USA"],"affiliations":[{"raw_affiliation_string":"Childrens Cancer Research Institute, Department of Epidemiology and Biostatistics, University of Texas Health Sciences Center, San Antonio, San Antonio, TX, USA","institution_ids":["https://openalex.org/I165951966"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Texas, San Antonio, TX, USA","institution_ids":["https://openalex.org/I45438204"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015077092","display_name":"Stephen T.C. Wong","orcid":"https://orcid.org/0000-0001-9188-6502"},"institutions":[{"id":"https://openalex.org/I1295876152","display_name":"Houston Methodist","ror":"https://ror.org/027zt9171","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1295876152"]},{"id":"https://openalex.org/I4210109259","display_name":"Methodist Hospital","ror":"https://ror.org/01r5p9y80","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2802827176","https://openalex.org/I4210109259"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen Wong","raw_affiliation_strings":["Texas Methodist Hospital Research Institute, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Texas Methodist Hospital Research Institute, Houston, TX, USA","institution_ids":["https://openalex.org/I1295876152","https://openalex.org/I4210109259"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5087249630"],"corresponding_institution_ids":["https://openalex.org/I45438204"],"apc_list":null,"apc_paid":null,"fwci":0.1604,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.54167406,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"58","issue":"11","first_page":"5883","last_page":"5894"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/markov-chain-monte-carlo","display_name":"Markov chain Monte Carlo","score":0.6648825407028198},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.6601150035858154},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5353574752807617},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.49443602561950684},{"id":"https://openalex.org/keywords/parametric-statistics","display_name":"Parametric statistics","score":0.4886930286884308},{"id":"https://openalex.org/keywords/monte-carlo-method","display_name":"Monte Carlo method","score":0.47496935725212097},{"id":"https://openalex.org/keywords/resolution","display_name":"Resolution (logic)","score":0.41037362813949585},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3992156684398651},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39803600311279297},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34132325649261475},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2528342008590698},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.19808357954025269},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.17774438858032227},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.17581510543823242}],"concepts":[{"id":"https://openalex.org/C111350023","wikidata":"https://www.wikidata.org/wiki/Q1191869","display_name":"Markov chain Monte Carlo","level":3,"score":0.6648825407028198},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.6601150035858154},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5353574752807617},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.49443602561950684},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.4886930286884308},{"id":"https://openalex.org/C19499675","wikidata":"https://www.wikidata.org/wiki/Q232207","display_name":"Monte Carlo method","level":2,"score":0.47496935725212097},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.41037362813949585},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3992156684398651},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39803600311279297},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34132325649261475},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2528342008590698},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.19808357954025269},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.17774438858032227},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.17581510543823242}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/tsp.2010.2065226","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsp.2010.2065226","pdf_url":null,"source":{"id":"https://openalex.org/S168680287","display_name":"IEEE Transactions on Signal Processing","issn_l":"1053-587X","issn":["1053-587X","1941-0476"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Signal Processing","raw_type":"journal-article"},{"id":"pmid:21544266","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21544266","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on signal processing : a publication of the IEEE Signal Processing Society","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3085289","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3085289","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Signal Process","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3085289","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3085289","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Signal Process","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332622","display_name":"University of California, San Francisco","ror":"https://ror.org/043mz5j54"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W1548955257","https://openalex.org/W1575497636","https://openalex.org/W1606248456","https://openalex.org/W1993480739","https://openalex.org/W2005726857","https://openalex.org/W2011716229","https://openalex.org/W2023096047","https://openalex.org/W2028087310","https://openalex.org/W2030211026","https://openalex.org/W2045656233","https://openalex.org/W2062752098","https://openalex.org/W2080593601","https://openalex.org/W2099794827","https://openalex.org/W2109408008","https://openalex.org/W2123989476","https://openalex.org/W2126897927","https://openalex.org/W2138533472","https://openalex.org/W2146197170","https://openalex.org/W2150544808","https://openalex.org/W2163703175","https://openalex.org/W2168130065","https://openalex.org/W2615612857","https://openalex.org/W4232383088","https://openalex.org/W4234589439","https://openalex.org/W6632828466","https://openalex.org/W6636270291"],"related_works":["https://openalex.org/W2151689585","https://openalex.org/W2380816257","https://openalex.org/W3087071515","https://openalex.org/W4283726152","https://openalex.org/W3093571331","https://openalex.org/W1525770572","https://openalex.org/W1485888979","https://openalex.org/W3172507773","https://openalex.org/W2806680938","https://openalex.org/W4302285290"],"abstract_inverted_index":{"In":[0],"this":[1,51],"paper,":[2],"we":[3],"address":[4],"the":[5,63],"issue":[6],"of":[7,36],"peptide":[8,24],"ion":[9,25],"peak":[10,26,69],"detection":[11,27,70,100,117],"for":[12,31],"high":[13],"resolution":[14,35],"time-of-flight":[15],"(TOF)":[16],"mass":[17],"spectrometry":[18],"(MS)":[19],"data.":[20],"A":[21],"novel":[22,58],"Bayesian":[23,68],"method":[28],"is":[29,80,85,119],"proposed":[30,64,83],"TOF":[32],"data":[33],"with":[34,111,126],"10":[37],"000-15":[38],"000":[39],"full":[40],"width":[41],"at":[42,50],"half-maximum":[43],"(FWHW).":[44],"MS":[45,122],"spectra":[46],"exhibit":[47],"distinct":[48],"characteristics":[49],"resolution,":[52],"which":[53],"are":[54],"captured":[55],"in":[56,99],"a":[57,67,96,103],"parametric":[59,65],"model.":[60],"Based":[61],"on":[62,73,87],"model,":[66],"algorithm":[71,84],"based":[72],"Markov":[74],"chain":[75],"Monte":[76],"Carlo":[77],"(MCMC)":[78],"sampling":[79],"developed.":[81],"The":[82,93,107],"tested":[86],"both":[88],"simulated":[89],"and":[90],"real":[91],"datasets.":[92],"results":[94,108],"show":[95],"significant":[97],"improvement":[98],"performance":[101],"over":[102],"commonly":[104],"employed":[105],"method.":[106],"also":[109],"agree":[110],"expert's":[112],"visual":[113],"inspection.":[114],"Moreover,":[115],"better":[116],"consistency":[118],"achieved":[120],"across":[121],"datasets":[123],"from":[124],"patients":[125],"identical":[127],"pathological":[128],"condition.":[129]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
