{"id":"https://openalex.org/W4411799204","doi":"https://doi.org/10.1109/tsmc.2025.3578348","title":"FMvPCI: A Multiview Fusion Neural Network for Identifying Protein Complex via Fuzzy Clustering","display_name":"FMvPCI: A Multiview Fusion Neural Network for Identifying Protein Complex via Fuzzy Clustering","publication_year":2025,"publication_date":"2025-06-30","ids":{"openalex":"https://openalex.org/W4411799204","doi":"https://doi.org/10.1109/tsmc.2025.3578348"},"language":"en","primary_location":{"id":"doi:10.1109/tsmc.2025.3578348","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsmc.2025.3578348","pdf_url":null,"source":{"id":"https://openalex.org/S4210209078","display_name":"IEEE Transactions on Systems Man and Cybernetics Systems","issn_l":"2168-2216","issn":["2168-2216","2168-2232"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Systems, Man, and Cybernetics: Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101632324","display_name":"Yue Yang","orcid":"https://orcid.org/0000-0001-7729-595X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106108","display_name":"Xinjiang Technical Institute of Physics & Chemistry","ror":"https://ror.org/00x44h034","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106108"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Yang","raw_affiliation_strings":["Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China"],"raw_orcid":"https://orcid.org/0000-0001-7729-595X","affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008221100","display_name":"Lun Hu","orcid":"https://orcid.org/0000-0002-1591-8549"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106108","display_name":"Xinjiang Technical Institute of Physics & Chemistry","ror":"https://ror.org/00x44h034","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106108"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lun Hu","raw_affiliation_strings":["Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China"],"raw_orcid":"https://orcid.org/0000-0002-1591-8549","affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100360781","display_name":"Guodong Li","orcid":"https://orcid.org/0009-0007-8980-0141"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106108","display_name":"Xinjiang Technical Institute of Physics & Chemistry","ror":"https://ror.org/00x44h034","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106108"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guodong Li","raw_affiliation_strings":["Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China"],"raw_orcid":"https://orcid.org/0009-0007-8980-0141","affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100386801","display_name":"Dongxu Li","orcid":"https://orcid.org/0000-0002-9701-5377"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106108","display_name":"Xinjiang Technical Institute of Physics & Chemistry","ror":"https://ror.org/00x44h034","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106108"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dongxu Li","raw_affiliation_strings":["Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078808331","display_name":"Pengwei Hu","orcid":"https://orcid.org/0000-0001-5974-7932"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106108","display_name":"Xinjiang Technical Institute of Physics & Chemistry","ror":"https://ror.org/00x44h034","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106108"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pengwei Hu","raw_affiliation_strings":["Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China"],"raw_orcid":"https://orcid.org/0000-0001-5974-7932","affiliations":[{"raw_affiliation_string":"Chinese Academy of Sciences, Xinjiang Technical Institute of Physics and Chemistry, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China","institution_ids":["https://openalex.org/I4210106108","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088955392","display_name":"Xin Luo","orcid":"https://orcid.org/0000-0002-1348-5305"},"institutions":[{"id":"https://openalex.org/I142108993","display_name":"Southwest University","ror":"https://ror.org/01kj4z117","country_code":"CN","type":"education","lineage":["https://openalex.org/I142108993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Luo","raw_affiliation_strings":["College of Computer and Information Science, Southwest University, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0002-1348-5305","affiliations":[{"raw_affiliation_string":"College of Computer and Information Science, Southwest University, Chongqing, China","institution_ids":["https://openalex.org/I142108993"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":12.5911,"has_fulltext":false,"cited_by_count":26,"citation_normalized_percentile":{"value":0.99150142,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"55","issue":"9","first_page":"6189","last_page":"6202"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9624999761581421,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9624999761581421,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6352759003639221},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6114426851272583},{"id":"https://openalex.org/keywords/fuzzy-clustering","display_name":"Fuzzy clustering","score":0.5795965194702148},{"id":"https://openalex.org/keywords/fuzzy-logic","display_name":"Fuzzy logic","score":0.5414665937423706},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5401673913002014},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.5368497967720032},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5266163945198059},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4402191936969757},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.34442105889320374}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6352759003639221},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6114426851272583},{"id":"https://openalex.org/C17212007","wikidata":"https://www.wikidata.org/wiki/Q5511111","display_name":"Fuzzy clustering","level":3,"score":0.5795965194702148},{"id":"https://openalex.org/C58166","wikidata":"https://www.wikidata.org/wiki/Q224821","display_name":"Fuzzy logic","level":2,"score":0.5414665937423706},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5401673913002014},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.5368497967720032},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5266163945198059},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4402191936969757},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.34442105889320374},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tsmc.2025.3578348","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsmc.2025.3578348","pdf_url":null,"source":{"id":"https://openalex.org/S4210209078","display_name":"IEEE Transactions on Systems Man and Cybernetics Systems","issn_l":"2168-2216","issn":["2168-2216","2168-2232"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Systems, Man, and Cybernetics: Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2828312957","display_name":null,"funder_award_id":"62302495","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6625888671","display_name":null,"funder_award_id":"2023D01E15","funder_id":"https://openalex.org/F4320311028","funder_display_name":"Natural Science Foundation of Xinjiang Province"},{"id":"https://openalex.org/G826153484","display_name":null,"funder_award_id":"62373348","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8515641209","display_name":null,"funder_award_id":"62272078","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320311028","display_name":"Natural Science Foundation of Xinjiang Province","ror":null},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1596536970","https://openalex.org/W1967638691","https://openalex.org/W1971013885","https://openalex.org/W1973508741","https://openalex.org/W1986214964","https://openalex.org/W2039473152","https://openalex.org/W2050721857","https://openalex.org/W2081375228","https://openalex.org/W2082565035","https://openalex.org/W2084619201","https://openalex.org/W2107067224","https://openalex.org/W2108984616","https://openalex.org/W2116117181","https://openalex.org/W2116447934","https://openalex.org/W2132582966","https://openalex.org/W2136850043","https://openalex.org/W2140280811","https://openalex.org/W2152495216","https://openalex.org/W2163485494","https://openalex.org/W2165533101","https://openalex.org/W2552212095","https://openalex.org/W2563515532","https://openalex.org/W2795829718","https://openalex.org/W2898402099","https://openalex.org/W2900359059","https://openalex.org/W2905614462","https://openalex.org/W2908670560","https://openalex.org/W2920331395","https://openalex.org/W3087406311","https://openalex.org/W3121027314","https://openalex.org/W3134169372","https://openalex.org/W3181833190","https://openalex.org/W3198527636","https://openalex.org/W3207471891","https://openalex.org/W4225090121","https://openalex.org/W4233437719","https://openalex.org/W4281676089","https://openalex.org/W4289535947","https://openalex.org/W4292263718","https://openalex.org/W4311824634","https://openalex.org/W4328007445","https://openalex.org/W4382998933","https://openalex.org/W4389317742","https://openalex.org/W4405907205","https://openalex.org/W6685380521","https://openalex.org/W6726873649","https://openalex.org/W6730084236"],"related_works":["https://openalex.org/W2945382830","https://openalex.org/W4224807364","https://openalex.org/W2596632494","https://openalex.org/W2535986621","https://openalex.org/W1980197432","https://openalex.org/W2382432689","https://openalex.org/W2000612978","https://openalex.org/W4388110928","https://openalex.org/W1483228865","https://openalex.org/W4292434959"],"abstract_inverted_index":{"Protein":[0],"complexes":[1,24,55,146,178],"play":[2],"a":[3,99,117,165,169],"crucial":[4],"role":[5],"in":[6,37,56],"regulating":[7],"various":[8],"biological":[9,41,129],"processes":[10],"that":[11],"govern":[12],"cell":[13],"activities.":[14],"Numerous":[15],"computational":[16],"algorithms":[17,34,62,81],"have":[18,63,199],"been":[19,200],"proposed":[20],"to":[21,48,123,202],"identify":[22],"protein":[23,54,69,88,107,145,177,231],"from":[25,133,196],"protein-protein":[26],"interaction":[27],"(PPI)":[28],"networks.":[29,58],"However,":[30],"many":[31],"of":[32,43,53,68,131,139,150,158,184,188,206,222],"these":[33,95],"face":[35],"limitations":[36],"effectively":[38,124],"leveraging":[39],"multiview":[40,100,119],"information":[42,130],"proteins,":[44],"restricting":[45],"their":[46,161],"ability":[47],"capture":[49],"the":[50,66,85,128,137,148,156,181,204,216,219,227],"intricate":[51],"characteristics":[52],"PPI":[57,193],"While":[59],"deep":[60],"learning-based":[61],"significantly":[64,225],"advanced":[65],"identification":[67,109,213,228],"complexes,":[70],"they":[71],"often":[72],"integrate":[73],"graph":[74,120],"representation":[75],"learning":[76],"techniques":[77],"into":[78],"traditional":[79],"clustering":[80],"without":[82],"explicitly":[83],"capturing":[84],"dependency":[86],"between":[87],"embeddings":[89,157],"and":[90,126,160,215],"resulting":[91],"complexes.":[92,232],"To":[93],"address":[94],"issues,":[96],"we":[97,115],"present":[98],"fusion":[101],"neural":[102],"network,":[103],"named":[104],"FMvPCI,":[105,114],"for":[106,230],"complex":[108],"via":[110],"fuzzy":[111,151],"clustering.":[112,152],"In":[113],"introduce":[116],"novel":[118],"convolution":[121],"encoder":[122],"manipulate":[125],"fuse":[127],"proteins":[132,159],"different":[134,192],"perspectives.":[135],"Subsequently,":[136],"optimization":[138],"FMvPCI":[140,173,207,223],"incorporates":[141],"our":[142],"expectations":[143],"about":[144],"through":[147],"concept":[149],"This":[153],"approach":[154],"unifies":[155],"cluster":[162,182],"memberships":[163,183],"within":[164],"coherent":[166],"framework.":[167],"Leveraging":[168],"heuristic":[170],"search":[171],"strategy,":[172],"can":[174],"discover":[175],"overlapping":[176],"based":[179],"on":[180,190],"proteins.":[185],"A":[186],"series":[187],"experiments":[189],"five":[191],"networks":[194],"collected":[195],"two":[197],"species":[198],"conducted":[201],"evaluate":[203],"performance":[205,221],"by":[208,224],"comparing":[209],"it":[210],"with":[211],"state-of-the-art":[212],"algorithms,":[214],"results":[217],"demonstrate":[218],"superior":[220],"improving":[226],"accuracy":[229]},"counts_by_year":[{"year":2026,"cited_by_count":11},{"year":2025,"cited_by_count":15}],"updated_date":"2026-07-14T08:27:34.040176","created_date":"2025-10-10T00:00:00"}
