{"id":"https://openalex.org/W4412170769","doi":"https://doi.org/10.1109/tsipn.2025.3587396","title":"E(Q)AGNN-PPIS: Attention Enhanced Equivariant Graph Neural Network for Protein-Protein Interaction Site Prediction","display_name":"E(Q)AGNN-PPIS: Attention Enhanced Equivariant Graph Neural Network for Protein-Protein Interaction Site Prediction","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4412170769","doi":"https://doi.org/10.1109/tsipn.2025.3587396"},"language":"en","primary_location":{"id":"doi:10.1109/tsipn.2025.3587396","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsipn.2025.3587396","pdf_url":null,"source":{"id":"https://openalex.org/S4306422866","display_name":"IEEE Transactions on Signal and Information Processing over Networks","issn_l":"2373-776X","issn":["2373-776X","2373-7778"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Signal and Information Processing over Networks","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008900196","display_name":"Animesh","orcid":null},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Animesh","raw_affiliation_strings":["Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India","institution_ids":["https://openalex.org/I145894827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107817879","display_name":"Rishi Suvvada","orcid":null},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rishi Suvvada","raw_affiliation_strings":["Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India","institution_ids":["https://openalex.org/I145894827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063438965","display_name":"Plaban Kumar Bhowmick","orcid":"https://orcid.org/0000-0002-6573-0093"},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Plaban Kumar Bhowmick","raw_affiliation_strings":["Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Artificial Intelligence, Indian Institute of Technology, Kharagpur, India","institution_ids":["https://openalex.org/I145894827"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069306071","display_name":"Pralay Mitra","orcid":"https://orcid.org/0000-0003-4119-3788"},"institutions":[{"id":"https://openalex.org/I145894827","display_name":"Indian Institute of Technology Kharagpur","ror":"https://ror.org/03w5sq511","country_code":"IN","type":"education","lineage":["https://openalex.org/I145894827"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Pralay Mitra","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology, Kharagpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology, Kharagpur, India","institution_ids":["https://openalex.org/I145894827"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5008900196"],"corresponding_institution_ids":["https://openalex.org/I145894827"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.18219157,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"11","issue":null,"first_page":"740","last_page":"751"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9843000173568726,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.47528281807899475},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.468788743019104},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4344594180583954},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.3352677524089813},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3274414539337158},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.14942395687103271}],"concepts":[{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.47528281807899475},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.468788743019104},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4344594180583954},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.3352677524089813},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3274414539337158},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.14942395687103271}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tsipn.2025.3587396","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tsipn.2025.3587396","pdf_url":null,"source":{"id":"https://openalex.org/S4306422866","display_name":"IEEE Transactions on Signal and Information Processing over Networks","issn_l":"2373-776X","issn":["2373-776X","2373-7778"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Signal and Information Processing over Networks","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W1483099488","https://openalex.org/W1534364704","https://openalex.org/W2008708467","https://openalex.org/W2010022403","https://openalex.org/W2051210555","https://openalex.org/W2076048958","https://openalex.org/W2116341502","https://openalex.org/W2131774270","https://openalex.org/W2139262886","https://openalex.org/W2141627824","https://openalex.org/W2155194485","https://openalex.org/W2157892451","https://openalex.org/W2194775991","https://openalex.org/W2557595285","https://openalex.org/W2617750324","https://openalex.org/W2907063321","https://openalex.org/W2944679105","https://openalex.org/W2966859223","https://openalex.org/W2971405760","https://openalex.org/W2992752586","https://openalex.org/W3009202743","https://openalex.org/W3080498684","https://openalex.org/W3177828909","https://openalex.org/W3197696221","https://openalex.org/W4309362167","https://openalex.org/W4309438076","https://openalex.org/W4362522229","https://openalex.org/W4364361380","https://openalex.org/W4388663283","https://openalex.org/W4389166162","https://openalex.org/W4391640608","https://openalex.org/W4392500220","https://openalex.org/W4393238102","https://openalex.org/W4394694796","https://openalex.org/W6726873649","https://openalex.org/W6736685754","https://openalex.org/W6745537798","https://openalex.org/W6754929296","https://openalex.org/W6780226713","https://openalex.org/W6782527804","https://openalex.org/W6790561777","https://openalex.org/W6795866128","https://openalex.org/W6849891955"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"In":[0],"this":[1,104,137],"work,":[2],"we":[3,57],"tackle":[4],"the":[5,43,63,70,75,87,111,116,121,125,131,143,148,153],"problem":[6],"of":[7,45,62,86,124,136,178],"beampattern":[8,133],"design":[9],"for":[10,142],"a":[11,15,28,37,59,82,100,108,163,179],"transmit":[12,139],"system":[13,51],"employing":[14],"large":[16],"reconfigurable":[17],"intelligent":[18],"surface":[19],"(RIS)":[20],"to":[21,80,92,103,107,159],"redirect":[22],"radio":[23],"frequency":[24],"signals":[25],"emitted":[26,65],"by":[27,35,66,74,115],"few":[29],"active":[30],"antennas":[31],"(sources).":[32],"We":[33,98],"begin":[34],"establishing":[36],"convenient":[38],"signal":[39,46],"model":[40],"and":[41,50,69,95,147,173],"discussing":[42],"impact":[44],"bandwidth,":[47],"source-RIS":[48],"channel,":[49],"geometry":[52],"on":[53,110,120],"our":[54],"derivations.":[55],"Subsequently,":[56],"propose":[58],"joint":[60],"optimization":[61],"waveform":[64],"each":[67],"source":[68],"phase":[71],"shifts":[72],"introduced":[73],"RIS.":[76],"The":[77,127],"objective":[78],"is":[79,157],"match":[81],"desired":[83,150],"space-frequency":[84],"distribution":[85],"far-field":[88],"radiation":[89,151],"pattern,":[90,152],"relevant":[91],"both":[93],"radar":[94],"communication":[96],"applications.":[97],"present":[99],"sub-optimal":[101],"solution":[102],"problem,":[105],"subject":[106],"constraint":[109],"total":[112],"power":[113],"radiated":[114],"sources":[117],"and,":[118],"optionally,":[119],"constant":[122],"modulus":[123],"waveforms.":[126],"provided":[128],"example":[129],"demonstrates":[130],"effective":[132],"shaping":[134],"capabilities":[135],"RIS-based":[138],"architecture.":[140],"Specifically,":[141],"same":[144,149],"array":[145],"size":[146],"resulting":[154],"approximation":[155],"error":[156],"comparable":[158],"that":[160,177],"obtained":[161],"with":[162],"fully-digital":[164],"MIMO":[165],"array,":[166],"especially":[167],"when":[168],"constant-modulus":[169],"waveforms":[170],"are":[171],"enforced,":[172],"significantly":[174],"smaller":[175],"than":[176],"phased":[180],"array.":[181]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
