{"id":"https://openalex.org/W3169752883","doi":"https://doi.org/10.1109/tpami.2022.3209686","title":"Graph Neural Networks in Network Neuroscience","display_name":"Graph Neural Networks in Network Neuroscience","publication_year":2022,"publication_date":"2022-09-26","ids":{"openalex":"https://openalex.org/W3169752883","doi":"https://doi.org/10.1109/tpami.2022.3209686","mag":"3169752883","pmid":"https://pubmed.ncbi.nlm.nih.gov/36155474"},"language":"en","primary_location":{"id":"doi:10.1109/tpami.2022.3209686","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tpami.2022.3209686","pdf_url":null,"source":{"id":"https://openalex.org/S199944782","display_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","issn_l":"0162-8828","issn":["0162-8828","1939-3539","2160-9292"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083045865","display_name":"Alaa Bessadok","orcid":"https://orcid.org/0000-0002-4102-0732"},"institutions":[{"id":"https://openalex.org/I48912391","display_name":"Istanbul Technical University","ror":"https://ror.org/059636586","country_code":"TR","type":"education","lineage":["https://openalex.org/I48912391"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Alaa Bessadok","raw_affiliation_strings":["BASIRA Lab, Faculty of Computer and Informatics, Istanbul Technical University, Istanbul, Turkey"],"affiliations":[{"raw_affiliation_string":"BASIRA Lab, Faculty of Computer and Informatics, Istanbul Technical University, Istanbul, Turkey","institution_ids":["https://openalex.org/I48912391"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000463539","display_name":"Mohamed Ali Mahjoub","orcid":"https://orcid.org/0000-0002-8181-4684"},"institutions":[{"id":"https://openalex.org/I8636806","display_name":"University of Sousse","ror":"https://ror.org/00dmpgj58","country_code":"TN","type":"education","lineage":["https://openalex.org/I8636806"]}],"countries":["TN"],"is_corresponding":false,"raw_author_name":"Mohamed Ali Mahjoub","raw_affiliation_strings":["LATIS Lab, ISITCOM, ENISo, University of Sousse, Sousse, BP, Tunisia"],"affiliations":[{"raw_affiliation_string":"LATIS Lab, ISITCOM, ENISo, University of Sousse, Sousse, BP, Tunisia","institution_ids":["https://openalex.org/I8636806"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048784346","display_name":"Islem Rekik","orcid":"https://orcid.org/0000-0001-5595-6673"},"institutions":[{"id":"https://openalex.org/I48912391","display_name":"Istanbul Technical University","ror":"https://ror.org/059636586","country_code":"TR","type":"education","lineage":["https://openalex.org/I48912391"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Islem Rekik","raw_affiliation_strings":["BASIRA Lab, Faculty of Computer and Informatics, Istanbul Technical University, Istanbul, Turkey"],"affiliations":[{"raw_affiliation_string":"BASIRA Lab, Faculty of Computer and Informatics, Istanbul Technical University, Istanbul, Turkey","institution_ids":["https://openalex.org/I48912391"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5083045865"],"corresponding_institution_ids":["https://openalex.org/I48912391"],"apc_list":null,"apc_paid":null,"fwci":30.5338,"has_fulltext":false,"cited_by_count":292,"citation_normalized_percentile":{"value":0.99933022,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"45","issue":"5","first_page":"5833","last_page":"5848"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6687040328979492},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.5950266122817993},{"id":"https://openalex.org/keywords/neuroinformatics","display_name":"Neuroinformatics","score":0.594653308391571},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5526618361473083},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.527839183807373},{"id":"https://openalex.org/keywords/systems-neuroscience","display_name":"Systems neuroscience","score":0.5084947347640991},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5063363313674927},{"id":"https://openalex.org/keywords/power-graph-analysis","display_name":"Power graph analysis","score":0.4911617934703827},{"id":"https://openalex.org/keywords/computational-neuroscience","display_name":"Computational neuroscience","score":0.4650028944015503},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.43575918674468994},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4353224039077759},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4129115641117096},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3150782585144043},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.21703141927719116},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.1503724753856659}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6687040328979492},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.5950266122817993},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.594653308391571},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5526618361473083},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.527839183807373},{"id":"https://openalex.org/C31288803","wikidata":"https://www.wikidata.org/wiki/Q2617516","display_name":"Systems neuroscience","level":5,"score":0.5084947347640991},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5063363313674927},{"id":"https://openalex.org/C106937863","wikidata":"https://www.wikidata.org/wiki/Q7236518","display_name":"Power graph analysis","level":3,"score":0.4911617934703827},{"id":"https://openalex.org/C15286952","wikidata":"https://www.wikidata.org/wiki/Q8037925","display_name":"Computational neuroscience","level":2,"score":0.4650028944015503},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.43575918674468994},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4353224039077759},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4129115641117096},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3150782585144043},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.21703141927719116},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.1503724753856659},{"id":"https://openalex.org/C2778609137","wikidata":"https://www.wikidata.org/wiki/Q105790271","display_name":"Myelin","level":3,"score":0.0},{"id":"https://openalex.org/C529278444","wikidata":"https://www.wikidata.org/wiki/Q47273","display_name":"Central nervous system","level":2,"score":0.0},{"id":"https://openalex.org/C2776985911","wikidata":"https://www.wikidata.org/wiki/Q916698","display_name":"Oligodendrocyte","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tpami.2022.3209686","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tpami.2022.3209686","pdf_url":null,"source":{"id":"https://openalex.org/S199944782","display_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","issn_l":"0162-8828","issn":["0162-8828","1939-3539","2160-9292"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Pattern Analysis and Machine Intelligence","raw_type":"journal-article"},{"id":"pmid:36155474","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36155474","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on pattern analysis and machine intelligence","raw_type":null},{"id":"pmh:oai:polen.itu.edu.tr:11527/33800","is_oa":false,"landing_page_url":"https://hdl.handle.net/11527/33800","pdf_url":null,"source":{"id":"https://openalex.org/S4306400460","display_name":"Istanbul Technical University Academic Open Archive (Istanbul Technical University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I48912391","host_organization_name":"Istanbul Technical University","host_organization_lineage":["https://openalex.org/I48912391"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":136,"referenced_works":["https://openalex.org/W1710476689","https://openalex.org/W1983183519","https://openalex.org/W1992900662","https://openalex.org/W2002367251","https://openalex.org/W2009650955","https://openalex.org/W2014022174","https://openalex.org/W2029519094","https://openalex.org/W2072522618","https://openalex.org/W2078524519","https://openalex.org/W2085561705","https://openalex.org/W2101135654","https://openalex.org/W2114099272","https://openalex.org/W2116341502","https://openalex.org/W2137218165","https://openalex.org/W2151721316","https://openalex.org/W2159929956","https://openalex.org/W2196267284","https://openalex.org/W2284714407","https://openalex.org/W2507387536","https://openalex.org/W2519887557","https://openalex.org/W2558364969","https://openalex.org/W2558460151","https://openalex.org/W2558748708","https://openalex.org/W2589870402","https://openalex.org/W2604525417","https://openalex.org/W2606202972","https://openalex.org/W2606780347","https://openalex.org/W2613031713","https://openalex.org/W2616982593","https://openalex.org/W2766022883","https://openalex.org/W2766070454","https://openalex.org/W2766453196","https://openalex.org/W2770468159","https://openalex.org/W2774217687","https://openalex.org/W2779020697","https://openalex.org/W2783307778","https://openalex.org/W2784456775","https://openalex.org/W2791956678","https://openalex.org/W2793631099","https://openalex.org/W2794107469","https://openalex.org/W2795480149","https://openalex.org/W2805284222","https://openalex.org/W2809455333","https://openalex.org/W2889302076","https://openalex.org/W2889639023","https://openalex.org/W2890858445","https://openalex.org/W2891396148","https://openalex.org/W2898535604","https://openalex.org/W2907492528","https://openalex.org/W2910745953","https://openalex.org/W2919115771","https://openalex.org/W2921730678","https://openalex.org/W2941401642","https://openalex.org/W2945032471","https://openalex.org/W2945602395","https://openalex.org/W2946736461","https://openalex.org/W2949763225","https://openalex.org/W2963499979","https://openalex.org/W2964015378","https://openalex.org/W2964153942","https://openalex.org/W2972317931","https://openalex.org/W2977883299","https://openalex.org/W2978335131","https://openalex.org/W2979309954","https://openalex.org/W2979428628","https://openalex.org/W2979558940","https://openalex.org/W2979595196","https://openalex.org/W2979598869","https://openalex.org/W2979650674","https://openalex.org/W2979706395","https://openalex.org/W2979810935","https://openalex.org/W2979847772","https://openalex.org/W2979869864","https://openalex.org/W2980204829","https://openalex.org/W2996143873","https://openalex.org/W3000120900","https://openalex.org/W3005600289","https://openalex.org/W3007332492","https://openalex.org/W3010360466","https://openalex.org/W3011667710","https://openalex.org/W3012166292","https://openalex.org/W3025623662","https://openalex.org/W3034942609","https://openalex.org/W3037798305","https://openalex.org/W3046002895","https://openalex.org/W3082225617","https://openalex.org/W3087445632","https://openalex.org/W3088367278","https://openalex.org/W3088946848","https://openalex.org/W3089794503","https://openalex.org/W3090302285","https://openalex.org/W3091159462","https://openalex.org/W3091963679","https://openalex.org/W3092011095","https://openalex.org/W3092164539","https://openalex.org/W3092246545","https://openalex.org/W3093274093","https://openalex.org/W3094949157","https://openalex.org/W3094958958","https://openalex.org/W3095656329","https://openalex.org/W3095701096","https://openalex.org/W3096250972","https://openalex.org/W3096301115","https://openalex.org/W3096751959","https://openalex.org/W3096779922","https://openalex.org/W3097640746","https://openalex.org/W3097781544","https://openalex.org/W3099526918","https://openalex.org/W3101228253","https://openalex.org/W3112377668","https://openalex.org/W3116637551","https://openalex.org/W3120785437","https://openalex.org/W3138479716","https://openalex.org/W3152893301","https://openalex.org/W3165642196","https://openalex.org/W3199008037","https://openalex.org/W3202323623","https://openalex.org/W3203677944","https://openalex.org/W3204748526","https://openalex.org/W4210981605","https://openalex.org/W4211091012","https://openalex.org/W4241074797","https://openalex.org/W4287683513","https://openalex.org/W4287829537","https://openalex.org/W4287991183","https://openalex.org/W4297733535","https://openalex.org/W6726873649","https://openalex.org/W6730166249","https://openalex.org/W6736685754","https://openalex.org/W6737786440","https://openalex.org/W6764540182","https://openalex.org/W6767288045","https://openalex.org/W6771625333","https://openalex.org/W6774097426","https://openalex.org/W6779715462","https://openalex.org/W6782956959"],"related_works":["https://openalex.org/W4380075502","https://openalex.org/W4223943233","https://openalex.org/W4312200629","https://openalex.org/W4360585206","https://openalex.org/W4364306694","https://openalex.org/W4380086463","https://openalex.org/W4225161397","https://openalex.org/W2964629181","https://openalex.org/W3002526821","https://openalex.org/W2790583019"],"abstract_inverted_index":{"Noninvasive":[0],"medical":[1],"neuroimaging":[2],"has":[3],"yielded":[4],"many":[5],"discoveries":[6],"about":[7],"the":[8,33,55,64,82],"brain":[9,19,35,37,94,99],"connectivity.":[10],"Several":[11],"substantial":[12],"techniques":[13],"mapping":[14],"morphological,":[15],"structural":[16],"and":[17,59,102,126],"functional":[18],"connectivities":[20],"were":[21],"developed":[22],"to":[23,67,93],"create":[24],"a":[25,50,109,112],"comprehensive":[26],"road":[27],"map":[28],"of":[29,53,115,132],"neuronal":[30],"activities":[31],"in":[32,70,89,118,135],"human":[34],"-namely":[36],"graph.":[38],"Relying":[39],"on":[40],"its":[41],"non-euclidean":[42],"data":[43],"type,":[44],"graph":[45,57,100,128],"neural":[46],"network":[47,72,119],"(GNN)":[48],"provides":[49],"clever":[51],"way":[52],"learning":[54],"deep":[56],"structure":[58],"it":[60],"is":[61,138],"rapidly":[62],"becoming":[63],"state-of-the-art":[65],"leading":[66],"enhanced":[68],"performance":[69],"various":[71],"neuroscience":[73,120],"tasks.":[74],"Here":[75],"we":[76],"review":[77],"current":[78],"GNN-based":[79],"methods,":[80],"highlighting":[81],"ways":[83],"that":[84],"they":[85],"have":[86],"been":[87],"used":[88],"several":[90],"applications":[91],"related":[92],"graphs":[95],"such":[96],"as":[97],"missing":[98],"synthesis":[101],"disease":[103],"classification.":[104],"We":[105],"conclude":[106],"by":[107],"charting":[108],"path":[110],"toward":[111],"better":[113],"application":[114],"GNN":[116],"models":[117],"field":[121],"for":[122],"neurological":[123],"disorder":[124],"diagnosis":[125],"population":[127],"integration.":[129],"The":[130],"list":[131],"papers":[133],"cited":[134],"our":[136],"work":[137],"available":[139],"at":[140],"https://github.com/basiralab/GNNs-in-Network-Neuroscience.":[141]},"counts_by_year":[{"year":2026,"cited_by_count":14},{"year":2025,"cited_by_count":105},{"year":2024,"cited_by_count":91},{"year":2023,"cited_by_count":44},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":18}],"updated_date":"2026-03-31T07:56:22.981413","created_date":"2025-10-10T00:00:00"}
