{"id":"https://openalex.org/W4384519640","doi":"https://doi.org/10.1109/tnnls.2023.3289182","title":"MGCNRF: Prediction of Disease-Related miRNAs Based on Multiple Graph Convolutional Networks and Random Forest","display_name":"MGCNRF: Prediction of Disease-Related miRNAs Based on Multiple Graph Convolutional Networks and Random Forest","publication_year":2023,"publication_date":"2023-07-17","ids":{"openalex":"https://openalex.org/W4384519640","doi":"https://doi.org/10.1109/tnnls.2023.3289182","pmid":"https://pubmed.ncbi.nlm.nih.gov/37459265"},"language":"en","primary_location":{"id":"doi:10.1109/tnnls.2023.3289182","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tnnls.2023.3289182","pdf_url":null,"source":{"id":"https://openalex.org/S4210175523","display_name":"IEEE Transactions on Neural Networks and Learning Systems","issn_l":"2162-237X","issn":["2162-237X","2162-2388"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Neural Networks and Learning Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101764909","display_name":"Yi Yang","orcid":"https://orcid.org/0000-0002-0808-8049"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Yang","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0002-0808-8049","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048138082","display_name":"Yan Sun","orcid":"https://orcid.org/0000-0002-0453-7054"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Sun","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0002-0453-7054","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100448913","display_name":"Feng Li","orcid":"https://orcid.org/0000-0002-5556-3789"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Li","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0002-5556-3789","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038661877","display_name":"Boxin Guan","orcid":"https://orcid.org/0000-0002-9122-168X"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Boxin Guan","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0002-9122-168X","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073144090","display_name":"Jin\u2010Xing Liu","orcid":"https://orcid.org/0000-0001-6104-2149"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin-Xing Liu","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0001-6104-2149","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007539735","display_name":"Junliang Shang","orcid":"https://orcid.org/0000-0002-8488-2228"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junliang Shang","raw_affiliation_strings":["School of Computer Science, Qufu Normal University, Rizhao, China"],"raw_orcid":"https://orcid.org/0000-0002-8488-2228","affiliations":[{"raw_affiliation_string":"School of Computer Science, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I202126657"],"apc_list":null,"apc_paid":null,"fwci":2.4233,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.90727632,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"35","issue":"11","first_page":"15701","last_page":"15709"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.7287991642951965},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6372631788253784},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6154074668884277},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5967437028884888},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4008934497833252},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38146886229515076},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3688487410545349},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35540974140167236},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.24117177724838257},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13381996750831604}],"concepts":[{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.7287991642951965},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6372631788253784},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6154074668884277},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5967437028884888},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4008934497833252},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38146886229515076},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3688487410545349},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35540974140167236},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.24117177724838257},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13381996750831604},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093743","descriptor_name":"Random Forest","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tnnls.2023.3289182","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tnnls.2023.3289182","pdf_url":null,"source":{"id":"https://openalex.org/S4210175523","display_name":"IEEE Transactions on Neural Networks and Learning Systems","issn_l":"2162-237X","issn":["2162-237X","2162-2388"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Neural Networks and Learning Systems","raw_type":"journal-article"},{"id":"pmid:37459265","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37459265","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on neural networks and learning systems","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7400000095367432,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G5609717784","display_name":"\u57fa\u4e8e\u4f4e\u79e9\u548c\u56fe\u6b63\u5219\u7ea6\u675f\u7684\u77e9\u9635\u5206\u89e3\u65b9\u6cd5\u7814\u7a76\u53ca\u5728\u764c\u75c7\u591a\u7ec4\u5b66\u6570\u636e\u4e2d\u7684\u5e94\u7528","funder_award_id":"61872220","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6334930974","display_name":"\u590d\u6742\u75be\u75c5\u5168\u57fa\u56e0\u7ec4SNP\u9ad8\u9636\u4e92\u4f5c\u6a21\u5f0f\u7684\u7f51\u7edc\u6316\u6398\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61972226","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7974007073","display_name":null,"funder_award_id":"61902216","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":48,"referenced_works":["https://openalex.org/W3972090","https://openalex.org/W144423133","https://openalex.org/W1757407923","https://openalex.org/W1970760326","https://openalex.org/W2014946489","https://openalex.org/W2042427688","https://openalex.org/W2074231493","https://openalex.org/W2075860675","https://openalex.org/W2103151642","https://openalex.org/W2118814218","https://openalex.org/W2126619650","https://openalex.org/W2129158737","https://openalex.org/W2141222510","https://openalex.org/W2258129851","https://openalex.org/W2410390867","https://openalex.org/W2601934706","https://openalex.org/W2750900465","https://openalex.org/W2780584018","https://openalex.org/W2802616725","https://openalex.org/W2885022346","https://openalex.org/W2888358121","https://openalex.org/W2898440040","https://openalex.org/W2899728356","https://openalex.org/W2902246085","https://openalex.org/W2903730942","https://openalex.org/W2964015378","https://openalex.org/W2980648926","https://openalex.org/W2983166786","https://openalex.org/W3000082418","https://openalex.org/W3009246021","https://openalex.org/W3047118115","https://openalex.org/W3082620742","https://openalex.org/W3093030756","https://openalex.org/W3097173659","https://openalex.org/W3146565636","https://openalex.org/W3157330827","https://openalex.org/W3170286690","https://openalex.org/W3214305858","https://openalex.org/W3215531133","https://openalex.org/W3215660838","https://openalex.org/W4206477010","https://openalex.org/W4226276166","https://openalex.org/W4234437331","https://openalex.org/W4246271082","https://openalex.org/W4255156463","https://openalex.org/W4400762160","https://openalex.org/W6726873649","https://openalex.org/W6836575638"],"related_works":["https://openalex.org/W3193043704","https://openalex.org/W4386259002","https://openalex.org/W1546989560","https://openalex.org/W3171520305","https://openalex.org/W1924178503","https://openalex.org/W3135126032","https://openalex.org/W4308716060","https://openalex.org/W4280648719","https://openalex.org/W4386937079","https://openalex.org/W4394984040"],"abstract_inverted_index":{"Increasing":[0],"microRNAs":[1],"(miRNAs)":[2],"have":[3,51,57],"been":[4],"confirmed":[5],"to":[6,10,130,162],"be":[7],"inextricably":[8],"linked":[9],"various":[11],"diseases,":[12],"and":[13,31,43,65,78,95,101,104,149,183],"the":[14,29,39,85,105,137,143,146,154,164,171,181,184,192],"discovery":[15],"of":[16,24,34,41,48,62,139,145,167,187,195],"their":[17],"associations":[18,40],"has":[19],"become":[20],"a":[21,46,70,203],"routine":[22],"way":[23],"treating":[25],"diseases.":[26],"To":[27],"overcome":[28],"time-consuming":[30],"laborious":[32],"shortcoming":[33],"traditional":[35],"experiments":[36],"in":[37,60],"verifying":[38],"miRNAs":[42],"diseases":[44,189],"(MDAs),":[45],"variety":[47],"computational":[49],"methods":[50,55,175],"emerged.":[52],"However,":[53],"these":[54],"still":[56],"many":[58],"shortcomings":[59],"terms":[61],"predictive":[63],"performance":[64,166],"accuracy.":[66],"In":[67,197],"this":[68],"study,":[69],"model":[71],"based":[72],"on":[73],"multiple":[74],"graph":[75,125],"convolutional":[76,126],"networks":[77,119,127],"random":[79,155],"forest":[80,156],"(MGCNRF)":[81],"was":[82,160],"proposed":[83],"for":[84,206],"prediction":[86,165],"MDAs.":[87,209],"Specifically,":[88],"MGCNRF":[89,115,135,199],"first":[90],"mapped":[91],"miRNA":[92],"functional":[93],"similarity":[94,100],"sequence":[96],"similarity,":[97,103],"disease":[98],"semantic":[99],"target":[102],"known":[106],"MDAs":[107,152],"into":[108,120,142],"four":[109,117,121],"different":[110,122,188],"two-layer":[111],"heterogeneous":[112,118],"networks.":[113],"Second,":[114],"applied":[116,161],"layered":[123],"attention":[124],"(GCNs),":[128],"respectively,":[129],"extract":[131],"MDA":[132,141],"embeddings.":[133],"Finally,":[134],"integrated":[136],"embeddings":[138],"every":[140],"features":[144],"miRNA-disease":[147],"pair":[148],"predicted":[150],"potential":[151,208],"through":[153],"(RF).":[157],"Fivefold":[158],"cross-validation":[159],"verify":[163],"MGCNRF,":[168],"which":[169],"outperforms":[170],"other":[172],"seven":[173],"state-of-the-art":[174],"by":[176],"area":[177],"under":[178],"curve.":[179],"Furthermore,":[180],"accuracy":[182],"case":[185],"studies":[186],"further":[190],"demonstrate":[191],"scientific":[193,204],"rationale":[194],"MGCNRF.":[196],"conclusion,":[198],"can":[200],"serve":[201],"as":[202],"tool":[205],"predicting":[207]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":4}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
