{"id":"https://openalex.org/W4296437652","doi":"https://doi.org/10.1109/tnnls.2022.3204686","title":"Graph Representation Learning for Large-Scale Neuronal Morphological Analysis","display_name":"Graph Representation Learning for Large-Scale Neuronal Morphological Analysis","publication_year":2022,"publication_date":"2022-09-19","ids":{"openalex":"https://openalex.org/W4296437652","doi":"https://doi.org/10.1109/tnnls.2022.3204686","pmid":"https://pubmed.ncbi.nlm.nih.gov/36121960"},"language":"en","primary_location":{"id":"doi:10.1109/tnnls.2022.3204686","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tnnls.2022.3204686","pdf_url":null,"source":{"id":"https://openalex.org/S4210175523","display_name":"IEEE Transactions on Neural Networks and Learning Systems","issn_l":"2162-237X","issn":["2162-237X","2162-2388"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Neural Networks and Learning Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101758228","display_name":"Jie Zhao","orcid":"https://orcid.org/0009-0001-4581-1347"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jie Zhao","raw_affiliation_strings":["National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088031350","display_name":"Xuejin Chen","orcid":"https://orcid.org/0000-0003-0478-7018"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuejin Chen","raw_affiliation_strings":["National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008612863","display_name":"Zhiwei Xiong","orcid":"https://orcid.org/0000-0002-9787-7460"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiwei Xiong","raw_affiliation_strings":["National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003217535","display_name":"Zheng-Jun Zha","orcid":"https://orcid.org/0000-0003-2510-8993"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng-Jun Zha","raw_affiliation_strings":["National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103150943","display_name":"Feng Wu","orcid":"https://orcid.org/0000-0001-7266-5579"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Wu","raw_affiliation_strings":["National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Brain-Inspired Intelligence Technology and Application, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101758228"],"corresponding_institution_ids":["https://openalex.org/I126520041"],"apc_list":null,"apc_paid":null,"fwci":3.1766,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.91513079,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"35","issue":"4","first_page":"5461","last_page":"5472"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.9803000092506409,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9765999913215637,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5274529457092285},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49615463614463806},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.463942289352417},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.44466814398765564},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.42772725224494934},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3689253330230713},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2066928744316101},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.1485646665096283},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.13232675194740295}],"concepts":[{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5274529457092285},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49615463614463806},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.463942289352417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.44466814398765564},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.42772725224494934},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3689253330230713},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2066928744316101},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.1485646665096283},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.13232675194740295},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007858","descriptor_name":"Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tnnls.2022.3204686","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tnnls.2022.3204686","pdf_url":null,"source":{"id":"https://openalex.org/S4210175523","display_name":"IEEE Transactions on Neural Networks and Learning Systems","issn_l":"2162-237X","issn":["2162-237X","2162-2388"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Neural Networks and Learning Systems","raw_type":"journal-article"},{"id":"pmid:36121960","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36121960","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on neural networks and learning systems","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G42091576","display_name":null,"funder_award_id":"62076230","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":64,"referenced_works":["https://openalex.org/W1939575207","https://openalex.org/W1974647172","https://openalex.org/W2005165207","https://openalex.org/W2005470134","https://openalex.org/W2019305522","https://openalex.org/W2028195942","https://openalex.org/W2047951563","https://openalex.org/W2051529918","https://openalex.org/W2061186544","https://openalex.org/W2070468940","https://openalex.org/W2074633779","https://openalex.org/W2099253838","https://openalex.org/W2102439945","https://openalex.org/W2112417784","https://openalex.org/W2118269922","https://openalex.org/W2134809220","https://openalex.org/W2144803285","https://openalex.org/W2153635508","https://openalex.org/W2169331639","https://openalex.org/W2178605380","https://openalex.org/W2293824885","https://openalex.org/W2345604143","https://openalex.org/W2410365153","https://openalex.org/W2464915613","https://openalex.org/W2528689894","https://openalex.org/W2698193957","https://openalex.org/W2744478946","https://openalex.org/W2761733590","https://openalex.org/W2785523628","https://openalex.org/W2788919350","https://openalex.org/W2883596583","https://openalex.org/W2912636151","https://openalex.org/W2951976236","https://openalex.org/W2964123455","https://openalex.org/W2964280870","https://openalex.org/W2965380306","https://openalex.org/W3007586577","https://openalex.org/W3012833893","https://openalex.org/W3036446966","https://openalex.org/W3038427962","https://openalex.org/W3099152386","https://openalex.org/W3117854388","https://openalex.org/W3121648796","https://openalex.org/W3152893301","https://openalex.org/W3157999218","https://openalex.org/W3174490084","https://openalex.org/W6629956336","https://openalex.org/W6693397755","https://openalex.org/W6697214482","https://openalex.org/W6713582119","https://openalex.org/W6720006811","https://openalex.org/W6726873649","https://openalex.org/W6730323794","https://openalex.org/W6738964360","https://openalex.org/W6754929296","https://openalex.org/W6756221748","https://openalex.org/W6766892243","https://openalex.org/W6771621015","https://openalex.org/W6779977557","https://openalex.org/W6784694379","https://openalex.org/W6784998633","https://openalex.org/W6785039685","https://openalex.org/W6802298853","https://openalex.org/W6840001741"],"related_works":["https://openalex.org/W2062195135","https://openalex.org/W2795079307","https://openalex.org/W2793058541","https://openalex.org/W1983629434","https://openalex.org/W2055929693","https://openalex.org/W4324271173","https://openalex.org/W1967645776","https://openalex.org/W2352227742","https://openalex.org/W2033914206","https://openalex.org/W2042327336"],"abstract_inverted_index":{"The":[0,16,149],"analysis":[1],"of":[2,20,25,45,131,157],"neuronal":[3,11,32,62,96,107,164],"morphological":[4,33,97,108,165],"data":[5,27],"is":[6],"essential":[7],"to":[8,60,121,126],"investigate":[9],"the":[10,102,123,138,153],"properties":[12],"and":[13,22,40,50,155,160],"brain":[14],"mechanisms.":[15],"complex":[17],"morphologies,":[18],"absence":[19],"annotations,":[21],"sheer":[23],"volume":[24],"these":[26],"pose":[28],"significant":[29],"challenges":[30],"in":[31,105],"analysis,":[34],"such":[35],"as":[36],"identifying":[37],"neuron":[38,42],"types":[39],"large-scale":[41,106,163],"retrieval,":[43],"all":[44],"which":[46,142],"require":[47],"accurate":[48],"measuring":[49],"efficient":[51],"matching":[52],"algorithms.":[53],"Recently,":[54],"many":[55],"studies":[56],"have":[57],"been":[58],"conducted":[59],"describe":[61],"morphologies":[63],"quantitatively":[64],"using":[65],"predefined":[66],"measurements.":[67],"However,":[68],"hand-crafted":[69],"features":[70],"are":[71],"usually":[72],"inadequate":[73],"for":[74,94,162],"distinguishing":[75],"fine-grained":[76],"differences":[77],"among":[78],"massive":[79],"neurons.":[80,132,148],"In":[81],"this":[82],"article,":[83],"we":[84,110],"propose":[85,112],"a":[86],"novel":[87],"morphology-aware":[88],"contrastive":[89],"graph":[90],"neural":[91],"network":[92,124],"(MACGNN)":[93],"unsupervised":[95],"representation":[98],"learning.":[99],"To":[100],"improve":[101],"retrieval":[103],"efficiency":[104],"datasets,":[109],"further":[111],"Hash-MACGNN":[113,161],"by":[114],"introducing":[115],"an":[116],"improved":[117],"deep":[118],"hash":[119,129],"algorithm":[120],"train":[122],"end-to-end":[125],"learn":[127],"binary":[128],"representations":[130],"We":[133],"conduct":[134],"extensive":[135],"experiments":[136],"on":[137],"largest":[139],"dataset,":[140],"NeuroMorpho,":[141],"contains":[143],"more":[144],"than":[145],"100":[146],"000":[147],"experimental":[150],"results":[151],"demonstrate":[152],"effectiveness":[154],"superiority":[156],"our":[158],"MACGNN":[159],"analysis.":[166]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2025-10-10T00:00:00"}
