{"id":"https://openalex.org/W4412795591","doi":"https://doi.org/10.1109/tmi.2025.3594364","title":"HoloDx: Knowledge- and Data-Driven Multimodal Diagnosis of Alzheimer\u2019s Disease","display_name":"HoloDx: Knowledge- and Data-Driven Multimodal Diagnosis of Alzheimer\u2019s Disease","publication_year":2025,"publication_date":"2025-07-31","ids":{"openalex":"https://openalex.org/W4412795591","doi":"https://doi.org/10.1109/tmi.2025.3594364","pmid":"https://pubmed.ncbi.nlm.nih.gov/40742839"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2025.3594364","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2025.3594364","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048890580","display_name":"Qiuhui Chen","orcid":"https://orcid.org/0000-0002-1210-1306"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiuhui Chen","raw_affiliation_strings":["School of Computer Science, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-1210-1306","affiliations":[{"raw_affiliation_string":"School of Computer Science, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100660244","display_name":"Jintao Wang","orcid":"https://orcid.org/0000-0003-4315-7545"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I2800570007","display_name":"Renji Hospital","ror":"https://ror.org/03ypbx660","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800570007"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jintao Wang","raw_affiliation_strings":["Department of Neurology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China","Department of Neurology, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China","institution_ids":["https://openalex.org/I2800570007","https://openalex.org/I183067930"]},{"raw_affiliation_string":"Department of Neurology, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China","institution_ids":["https://openalex.org/I2800570007","https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100367305","display_name":"Gang Wang","orcid":"https://orcid.org/0000-0001-6500-5863"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I2800570007","display_name":"Renji Hospital","ror":"https://ror.org/03ypbx660","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800570007"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Gang Wang","raw_affiliation_strings":["Department of Neurology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China","Department of Neurology, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0001-6500-5863","affiliations":[{"raw_affiliation_string":"Department of Neurology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China","institution_ids":["https://openalex.org/I2800570007","https://openalex.org/I183067930"]},{"raw_affiliation_string":"Department of Neurology, Renji Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China","institution_ids":["https://openalex.org/I2800570007","https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101931365","display_name":"Yi Hong","orcid":"https://orcid.org/0000-0002-9065-3691"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Hong","raw_affiliation_strings":["School of Computer Science, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-9065-3691","affiliations":[{"raw_affiliation_string":"School of Computer Science, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.4868,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.65080784,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"45","issue":"1","first_page":"206","last_page":"219"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8241000175476074,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8241000175476074,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5536549091339111},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4863005578517914},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41482362151145935},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2767886519432068},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1093437671661377}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5536549091339111},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4863005578517914},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41482362151145935},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2767886519432068},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1093437671661377}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064847","descriptor_name":"Multimodal Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D064847","descriptor_name":"Multimodal Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D064847","descriptor_name":"Multimodal Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tmi.2025.3594364","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2025.3594364","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:40742839","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40742839","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6825432458","display_name":null,"funder_award_id":"62203303","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7102059342","display_name":null,"funder_award_id":"2024YFC2511100/2024YFC2511105","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8250733612","display_name":null,"funder_award_id":"2021SHZDZX0102","funder_id":"https://openalex.org/F4320335480","funder_display_name":"Guangzhou Municipal Science and Technology Project"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335480","display_name":"Guangzhou Municipal Science and Technology Project","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W2106931873","https://openalex.org/W2115017507","https://openalex.org/W2115799070","https://openalex.org/W2122328291","https://openalex.org/W2123957845","https://openalex.org/W2150534249","https://openalex.org/W2194775991","https://openalex.org/W2563148755","https://openalex.org/W2798054687","https://openalex.org/W2896538705","https://openalex.org/W2964142373","https://openalex.org/W2965373594","https://openalex.org/W2968446587","https://openalex.org/W3029958263","https://openalex.org/W3197974218","https://openalex.org/W4206043398","https://openalex.org/W4206922973","https://openalex.org/W4225986196","https://openalex.org/W4307906300","https://openalex.org/W4310461604","https://openalex.org/W4312749457","https://openalex.org/W4313156423","https://openalex.org/W4380319195","https://openalex.org/W4382239691","https://openalex.org/W4384522480","https://openalex.org/W4387627515","https://openalex.org/W4390873264","https://openalex.org/W4390970660","https://openalex.org/W4390971129","https://openalex.org/W4390971243","https://openalex.org/W4390992059","https://openalex.org/W4390992090","https://openalex.org/W4395069899","https://openalex.org/W4396706069","https://openalex.org/W4401287360","https://openalex.org/W4403780805","https://openalex.org/W4404365294","https://openalex.org/W4406271589","https://openalex.org/W4409906357"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Accurate":[0],"diagnosis":[1,48],"of":[2,103],"Alzheimer's":[3],"disease":[4],"(AD)":[5],"requires":[6],"effectively":[7],"integrating":[8],"multimodal":[9,22,54],"data":[10],"and":[11,24,42,82,130],"clinical":[12,55,83],"expertise.":[13,84],"However,":[14],"existing":[15],"methods":[16],"often":[17],"struggle":[18],"to":[19,28,71],"fully":[20],"utilize":[21],"information":[23],"lack":[25],"structured":[26],"mechanisms":[27],"incorporate":[29],"dynamic":[30],"domain":[31,51],"knowledge.":[32],"To":[33],"address":[34],"these":[35,104],"limitations,":[36],"we":[37],"propose":[38],"HoloDx,":[39],"a":[40,59,64],"knowledge-":[41],"data-driven":[43],"framework":[44],"that":[45,121],"enhances":[46],"AD":[47,118],"by":[49],"aligning":[50],"knowledge":[52,60],"with":[53,63,89],"data.":[56],"HoloDx":[57,106,122],"incorporates":[58],"injection":[61,87],"module":[62,88],"knowledge-aware":[65],"gated":[66],"cross-attention,":[67],"allowing":[68],"the":[69],"model":[70],"dynamically":[72],"integrate":[73],"domain-specific":[74],"insights":[75],"from":[76],"both":[77],"large":[78],"language":[79],"models":[80],"(LLMs)":[81],"A":[85],"memory":[86,91],"prototypical":[90],"attention":[92],"further":[93],"enables":[94],"consistency":[95],"preservation":[96],"across":[97,133],"decision":[98],"trajectories.":[99],"Through":[100],"synergistic":[101],"operation":[102],"components,":[105],"achieves":[107],"enhanced":[108],"interpretability":[109],"while":[110],"maintaining":[111],"precise":[112],"knowledge-data":[113],"alignment.":[114],"Evaluations":[115],"on":[116],"five":[117],"datasets":[119],"demonstrate":[120],"outperforms":[123],"state-of-the-art":[124],"methods,":[125],"achieving":[126],"superior":[127],"diagnostic":[128],"accuracy":[129],"strong":[131],"generalization":[132],"diverse":[134],"cohorts.":[135],"The":[136],"source":[137],"code":[138],"is":[139],"released":[140],"at":[141],"https://github.com/Qybc/HoloDx.":[142]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-01-08T20:05:33.558190","created_date":"2025-10-10T00:00:00"}
