{"id":"https://openalex.org/W4396877791","doi":"https://doi.org/10.1109/tmi.2024.3400276","title":"WASPSYN: A Challenge for Domain Adaptive Synapse Detection in Microwasp Brain Connectomes","display_name":"WASPSYN: A Challenge for Domain Adaptive Synapse Detection in Microwasp Brain Connectomes","publication_year":2024,"publication_date":"2024-05-13","ids":{"openalex":"https://openalex.org/W4396877791","doi":"https://doi.org/10.1109/tmi.2024.3400276","pmid":"https://pubmed.ncbi.nlm.nih.gov/38739506"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2024.3400276","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2024.3400276","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11585350/pdf/nihms-2033630.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059165070","display_name":"Yicong Li","orcid":"https://orcid.org/0000-0001-5108-4038"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yicong Li","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA"],"raw_orcid":"https://orcid.org/0000-0001-5108-4038","affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082419115","display_name":"Wanhua Li","orcid":"https://orcid.org/0000-0002-2730-0543"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wanhua Li","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100340166","display_name":"Qi Chen","orcid":"https://orcid.org/0000-0002-4978-1974"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Chen","raw_affiliation_strings":["Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100667042","display_name":"Wei Huang","orcid":"https://orcid.org/0000-0001-7513-3105"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Huang","raw_affiliation_strings":["Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China"],"raw_orcid":"https://orcid.org/0000-0001-7513-3105","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104213566","display_name":"Yuda Zou","orcid":null},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuda Zou","raw_affiliation_strings":["School of Computer Science, Wuhan University, Wuhan, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101539269","display_name":"Xin Xiao","orcid":"https://orcid.org/0000-0002-8434-0533"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Xiao","raw_affiliation_strings":["School of Computer Science, Wuhan University, Wuhan, Hubei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063144293","display_name":"Kazunori Shinomiya","orcid":"https://orcid.org/0000-0003-0262-6421"},"institutions":[{"id":"https://openalex.org/I4210153546","display_name":"Flatiron Health (United States)","ror":"https://ror.org/0508h6p74","country_code":"US","type":"company","lineage":["https://openalex.org/I4210153546"]},{"id":"https://openalex.org/I4387153999","display_name":"Flatiron Institute","ror":"https://ror.org/00sekdz59","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I4210107338","https://openalex.org/I4387153999"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kazunori Shinomiya","raw_affiliation_strings":["Flatiron Institute, New York, NY, USA"],"raw_orcid":"https://orcid.org/0000-0003-0262-6421","affiliations":[{"raw_affiliation_string":"Flatiron Institute, New York, NY, USA","institution_ids":["https://openalex.org/I4210153546","https://openalex.org/I4387153999"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016947398","display_name":"Pat Gunn","orcid":"https://orcid.org/0000-0003-1863-1081"},"institutions":[{"id":"https://openalex.org/I4210153546","display_name":"Flatiron Health (United States)","ror":"https://ror.org/0508h6p74","country_code":"US","type":"company","lineage":["https://openalex.org/I4210153546"]},{"id":"https://openalex.org/I4387153999","display_name":"Flatiron Institute","ror":"https://ror.org/00sekdz59","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I4210107338","https://openalex.org/I4387153999"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pat Gunn","raw_affiliation_strings":["Flatiron Institute, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Flatiron Institute, New York, NY, USA","institution_ids":["https://openalex.org/I4210153546","https://openalex.org/I4387153999"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050733459","display_name":"Nishika Gupta","orcid":null},"institutions":[{"id":"https://openalex.org/I74796645","display_name":"Birla Institute of Technology and Science, Pilani","ror":"https://ror.org/001p3jz28","country_code":"IN","type":"education","lineage":["https://openalex.org/I74796645"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nishika Gupta","raw_affiliation_strings":["Birla Institute of Technology and Science, Pilani, Vidya Vihar, Pilani, Rajasthan, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Birla Institute of Technology and Science, Pilani, Vidya Vihar, Pilani, Rajasthan, India","institution_ids":["https://openalex.org/I74796645"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018157873","display_name":"Alexey A. Polilov","orcid":"https://orcid.org/0000-0002-6214-3627"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Alexey Polilov","raw_affiliation_strings":["Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia"],"raw_orcid":"https://orcid.org/0000-0002-6214-3627","affiliations":[{"raw_affiliation_string":"Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082564408","display_name":"Yongchao Xu","orcid":"https://orcid.org/0000-0002-7253-3151"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongchao Xu","raw_affiliation_strings":["School of Computer Science, Wuhan University, Wuhan, Hubei, China"],"raw_orcid":"https://orcid.org/0000-0002-7253-3151","affiliations":[{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, Hubei, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103136560","display_name":"Yueyi Zhang","orcid":"https://orcid.org/0000-0003-0788-8826"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yueyi Zhang","raw_affiliation_strings":["Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China"],"raw_orcid":"https://orcid.org/0000-0003-0788-8826","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008612863","display_name":"Zhiwei Xiong","orcid":"https://orcid.org/0000-0002-9787-7460"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiwei Xiong","raw_affiliation_strings":["Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China"],"raw_orcid":"https://orcid.org/0000-0002-9787-7460","affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering and Information Science, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043151044","display_name":"Hanspeter Pfister","orcid":"https://orcid.org/0000-0002-3620-2582"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanspeter Pfister","raw_affiliation_strings":["Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA"],"raw_orcid":"https://orcid.org/0000-0002-3620-2582","affiliations":[{"raw_affiliation_string":"Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085365474","display_name":"Donglai Wei","orcid":"https://orcid.org/0000-0002-2329-5484"},"institutions":[{"id":"https://openalex.org/I103531236","display_name":"Boston College","ror":"https://ror.org/02n2fzt79","country_code":"US","type":"education","lineage":["https://openalex.org/I103531236"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donglai Wei","raw_affiliation_strings":["Computer Science Department, Boston College, Chestnut Hill, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, Boston College, Chestnut Hill, MA, USA","institution_ids":["https://openalex.org/I103531236"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047394906","display_name":"Jingpeng Wu","orcid":"https://orcid.org/0000-0003-1604-8802"},"institutions":[{"id":"https://openalex.org/I4210153546","display_name":"Flatiron Health (United States)","ror":"https://ror.org/0508h6p74","country_code":"US","type":"company","lineage":["https://openalex.org/I4210153546"]},{"id":"https://openalex.org/I4387153999","display_name":"Flatiron Institute","ror":"https://ror.org/00sekdz59","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I4210107338","https://openalex.org/I4387153999"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jingpeng Wu","raw_affiliation_strings":["Flatiron Institute, New York, NY, USA"],"raw_orcid":"https://orcid.org/0000-0003-1604-8802","affiliations":[{"raw_affiliation_string":"Flatiron Institute, New York, NY, USA","institution_ids":["https://openalex.org/I4210153546","https://openalex.org/I4387153999"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2407,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.47723386,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"43","issue":"11","first_page":"3719","last_page":"3730"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9707000255584717,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/connectomics","display_name":"Connectomics","score":0.9462915658950806},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7818536758422852},{"id":"https://openalex.org/keywords/connectome","display_name":"Connectome","score":0.708284854888916},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.6604803800582886},{"id":"https://openalex.org/keywords/adaptation","display_name":"Adaptation (eye)","score":0.49283432960510254},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48734888434410095},{"id":"https://openalex.org/keywords/terabyte","display_name":"Terabyte","score":0.46737828850746155},{"id":"https://openalex.org/keywords/synapse","display_name":"Synapse","score":0.43153366446495056},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3309127986431122},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.17925146222114563},{"id":"https://openalex.org/keywords/functional-connectivity","display_name":"Functional connectivity","score":0.15928494930267334},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10947594046592712}],"concepts":[{"id":"https://openalex.org/C2779097318","wikidata":"https://www.wikidata.org/wiki/Q2993446","display_name":"Connectomics","level":4,"score":0.9462915658950806},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7818536758422852},{"id":"https://openalex.org/C45715564","wikidata":"https://www.wikidata.org/wiki/Q1292103","display_name":"Connectome","level":3,"score":0.708284854888916},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.6604803800582886},{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.49283432960510254},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48734888434410095},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.46737828850746155},{"id":"https://openalex.org/C127445978","wikidata":"https://www.wikidata.org/wiki/Q187181","display_name":"Synapse","level":2,"score":0.43153366446495056},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3309127986431122},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.17925146222114563},{"id":"https://openalex.org/C3018011982","wikidata":"https://www.wikidata.org/wiki/Q7316120","display_name":"Functional connectivity","level":2,"score":0.15928494930267334},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10947594046592712},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D013569","descriptor_name":"Synapses","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D063132","descriptor_name":"Connectome","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1109/tmi.2024.3400276","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2024.3400276","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:38739506","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38739506","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11585350","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11585350/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11585350/pdf/nihms-2033630.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Med Imaging","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:11389314","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11585350","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11585350","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11585350/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11585350/pdf/nihms-2033630.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Med Imaging","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G394761262","display_name":null,"funder_award_id":"R01 HD104969","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G44149480","display_name":null,"funder_award_id":"22-14-00028","funder_id":"https://openalex.org/F4320324099","funder_display_name":"Russian Science Foundation"},{"id":"https://openalex.org/G540433316","display_name":null,"funder_award_id":"NCS-FO-2124179","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6052995987","display_name":null,"funder_award_id":"R01HD104969","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7703582785","display_name":null,"funder_award_id":"R01HD104969","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8193572665","display_name":"NCS-FO: Empowering Data-Driven Hypothesis Generation for Scalable Connectomics Analysis","funder_award_id":"2124179","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306164","display_name":"Simons Foundation","ror":"https://ror.org/01cmst727"},{"id":"https://openalex.org/F4320319356","display_name":"Flatiron Health","ror":"https://ror.org/0508h6p74"},{"id":"https://openalex.org/F4320324099","display_name":"Russian Science Foundation","ror":"https://ror.org/03y2gwe85"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4396877791.pdf"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W639708223","https://openalex.org/W1686810756","https://openalex.org/W1901129140","https://openalex.org/W1965637518","https://openalex.org/W1982696459","https://openalex.org/W2034184519","https://openalex.org/W2043847720","https://openalex.org/W2058547540","https://openalex.org/W2069702026","https://openalex.org/W2072350275","https://openalex.org/W2080878189","https://openalex.org/W2087523977","https://openalex.org/W2119278045","https://openalex.org/W2148913378","https://openalex.org/W2151003399","https://openalex.org/W2163314583","https://openalex.org/W2165698076","https://openalex.org/W2168072374","https://openalex.org/W2231099397","https://openalex.org/W2326626448","https://openalex.org/W2464708700","https://openalex.org/W2475287302","https://openalex.org/W2478454054","https://openalex.org/W2532914546","https://openalex.org/W2557169239","https://openalex.org/W2565639579","https://openalex.org/W2592023542","https://openalex.org/W2593768305","https://openalex.org/W2603777577","https://openalex.org/W2621042378","https://openalex.org/W2786808285","https://openalex.org/W2802399484","https://openalex.org/W2901860341","https://openalex.org/W2913989356","https://openalex.org/W2919115771","https://openalex.org/W2943001153","https://openalex.org/W2943035624","https://openalex.org/W2962948284","https://openalex.org/W2963150697","https://openalex.org/W2963659894","https://openalex.org/W2964285681","https://openalex.org/W3025869703","https://openalex.org/W3028116930","https://openalex.org/W3038470276","https://openalex.org/W3092609815","https://openalex.org/W3109531692","https://openalex.org/W3121420165","https://openalex.org/W3130613343","https://openalex.org/W3130794141","https://openalex.org/W3133640637","https://openalex.org/W3170914969","https://openalex.org/W3174415204","https://openalex.org/W3186956811","https://openalex.org/W3206391179","https://openalex.org/W4211114670","https://openalex.org/W4213328656","https://openalex.org/W4220861650","https://openalex.org/W4225410130","https://openalex.org/W4226310282","https://openalex.org/W4280631251","https://openalex.org/W4284664944","https://openalex.org/W4307227099","https://openalex.org/W4321608048","https://openalex.org/W4323066529","https://openalex.org/W4366162939","https://openalex.org/W4366330698","https://openalex.org/W4386047746","https://openalex.org/W4387142526","https://openalex.org/W4390874575","https://openalex.org/W4391756091","https://openalex.org/W4401750034","https://openalex.org/W6637373629","https://openalex.org/W6684191040","https://openalex.org/W6684774364","https://openalex.org/W6738486038","https://openalex.org/W6796777449","https://openalex.org/W6800172567","https://openalex.org/W6811280016","https://openalex.org/W6851422110"],"related_works":["https://openalex.org/W3210800206","https://openalex.org/W1744057168","https://openalex.org/W2124698428","https://openalex.org/W2091472861","https://openalex.org/W2945607120","https://openalex.org/W2086448982","https://openalex.org/W112425480","https://openalex.org/W2550381304","https://openalex.org/W2946138627","https://openalex.org/W3112117434"],"abstract_inverted_index":{"The":[0,152,202],"size":[1],"of":[2,19,30,52,93,105,113,133,156,186,190,236],"image":[3,38,55,90,126],"volumes":[4,39,56,127],"in":[5,35,57,73,87,160],"connectomics":[6,99,121,224],"studies":[7],"now":[8],"reaches":[9],"terabyte":[10],"and":[11,66,144,158,183,193,205,226,239],"often":[12,48],"petabyte":[13],"scales":[14],"with":[15,165],"a":[16,103,129],"great":[17],"diversity":[18],"appearance":[20],"due":[21,101],"to":[22,43,68,83,102,110,208,232],"different":[23,141],"sample":[24],"preparation":[25],"procedures.":[26],"However,":[27],"manual":[28],"annotation":[29],"neuronal":[31],"structures":[32],"(e.g.,":[33],"synapses)":[34],"these":[36],"huge":[37],"is":[40,204],"time-consuming,":[41],"leading":[42],"limited":[44],"labeled":[45,64],"training":[46],"data":[47,65,71,100],"smaller":[49],"than":[50],"0.001%":[51],"the":[53,88,146,161,173,175,177,180,184,187,191,194,228,234],"large-scale":[54,120],"application.":[58],"Methods":[59],"that":[60,215,230],"can":[61],"utilize":[62],"in-domain":[63],"generalize":[67],"out-of-domain":[69],"unlabeled":[70],"are":[72,81,199],"urgent":[74],"need.":[75],"Although":[76],"many":[77],"domain":[78,106,114],"adaptation":[79,107],"approaches":[80],"proposed":[82,178],"address":[84],"such":[85],"issues":[86],"natural":[89],"domain,":[91],"few":[92],"them":[94],"have":[95],"been":[96],"evaluated":[97],"on":[98,196],"lack":[104],"benchmarks.":[108],"Therefore,":[109],"enable":[111],"developments":[112],"adaptive":[115],"synapse":[116],"detection":[117],"methods":[118],"for":[119],"applications,":[122],"we":[123],"annotated":[124],"14":[125],"from":[128,139,217],"biologically":[130],"diverse":[131],"set":[132],"Megaphragma":[134],"viggianii":[135],"brain":[136,237],"regions":[137],"originating":[138],"three":[140],"whole-brain":[142],"datasets":[143],"organized":[145],"WASPSYN":[147],"challenge":[148,192,203,219],"at":[149,211],"ISBI":[150],"2023.":[151],"annotations":[153],"include":[154],"coordinates":[155],"pre-synapses":[157],"post-synapses":[159],"3D":[162],"space,":[163],"together":[164],"their":[166],"one-to-many":[167],"connectivity":[168],"information.":[169],"This":[170],"paper":[171],"describes":[172],"dataset,":[174],"tasks,":[176],"baseline,":[179],"evaluation":[181],"method,":[182],"results":[185],"challenge.":[188],"Limitations":[189],"impact":[195],"neuroscience":[197],"research":[198,225],"also":[200],"discussed.":[201],"will":[206],"continue":[207],"be":[209],"available":[210],"https://codalab.lisn.upsaclay.fr/competitions/9169.":[212],"Successful":[213],"algorithms":[214],"emerge":[216],"our":[218],"may":[220],"potentially":[221],"revolutionize":[222],"real-world":[223],"further":[227],"cause":[229],"aims":[231],"unravel":[233],"complexity":[235],"structure":[238],"function.":[240]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-19T07:52:34.831488","created_date":"2025-10-10T00:00:00"}
