{"id":"https://openalex.org/W4310461141","doi":"https://doi.org/10.1109/tmi.2022.3225667","title":"BowelNet: Joint Semantic-Geometric Ensemble Learning for Bowel Segmentation From Both Partially and Fully Labeled CT Images","display_name":"BowelNet: Joint Semantic-Geometric Ensemble Learning for Bowel Segmentation From Both Partially and Fully Labeled CT Images","publication_year":2022,"publication_date":"2022-12-01","ids":{"openalex":"https://openalex.org/W4310461141","doi":"https://doi.org/10.1109/tmi.2022.3225667","pmid":"https://pubmed.ncbi.nlm.nih.gov/36449590"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2022.3225667","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2022.3225667","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100329463","display_name":"Chong Wang","orcid":"https://orcid.org/0000-0003-0022-0217"},"institutions":[{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chong Wang","raw_affiliation_strings":["School of Biomedical Engineering, ShanghaiTech University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0003-0022-0217","affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering, ShanghaiTech University, Shanghai, China","institution_ids":["https://openalex.org/I30809798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100602191","display_name":"Zhiming Cui","orcid":"https://orcid.org/0000-0002-3798-4504"},"institutions":[{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiming Cui","raw_affiliation_strings":["School of Biomedical Engineering, ShanghaiTech University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering, ShanghaiTech University, Shanghai, China","institution_ids":["https://openalex.org/I30809798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101684374","display_name":"Junwei Yang","orcid":"https://orcid.org/0000-0002-1415-177X"},"institutions":[{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junwei Yang","raw_affiliation_strings":["School of Biomedical Engineering, ShanghaiTech University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-1415-177X","affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering, ShanghaiTech University, Shanghai, China","institution_ids":["https://openalex.org/I30809798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112512473","display_name":"Miaofei Han","orcid":null},"institutions":[{"id":"https://openalex.org/I4210135459","display_name":"United Imaging Healthcare (China)","ror":"https://ror.org/03qqw3m37","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210135459"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Miaofei Han","raw_affiliation_strings":["Shanghai United Imaging Intelligence Company Ltd., Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai United Imaging Intelligence Company Ltd., Shanghai, China","institution_ids":["https://openalex.org/I4210135459"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029215323","display_name":"Gustavo Carneiro","orcid":"https://orcid.org/0000-0002-5571-6220"},"institutions":[{"id":"https://openalex.org/I4210127558","display_name":"Australian Centre for Robotic Vision","ror":"https://ror.org/02zv9xv82","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210127558"]},{"id":"https://openalex.org/I5681781","display_name":"The University of Adelaide","ror":"https://ror.org/00892tw58","country_code":"AU","type":"education","lineage":["https://openalex.org/I5681781"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Gustavo Carneiro","raw_affiliation_strings":["Australian Institute for Machine Learning, University of Adelaide, Adelaide, SA, Australia"],"raw_orcid":"https://orcid.org/0000-0002-5571-6220","affiliations":[{"raw_affiliation_string":"Australian Institute for Machine Learning, University of Adelaide, Adelaide, SA, Australia","institution_ids":["https://openalex.org/I4210127558","https://openalex.org/I5681781"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000937401","display_name":"Dinggang Shen","orcid":"https://orcid.org/0000-0002-7934-5698"},"institutions":[{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dinggang Shen","raw_affiliation_strings":["School of Biomedical Engineering, ShanghaiTech University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-7934-5698","affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering, ShanghaiTech University, Shanghai, China","institution_ids":["https://openalex.org/I30809798"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.8744,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.91199315,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"42","issue":"4","first_page":"1225","last_page":"1236"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7531229853630066},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.650454044342041},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5830380320549011},{"id":"https://openalex.org/keywords/boundary","display_name":"Boundary (topology)","score":0.5103042125701904},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.47268420457839966},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.451617956161499},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.40757933259010315},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1876816749572754}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7531229853630066},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.650454044342041},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5830380320549011},{"id":"https://openalex.org/C62354387","wikidata":"https://www.wikidata.org/wiki/Q875399","display_name":"Boundary (topology)","level":2,"score":0.5103042125701904},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.47268420457839966},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.451617956161499},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.40757933259010315},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1876816749572754},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010388","descriptor_name":"Pelvis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010388","descriptor_name":"Pelvis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010388","descriptor_name":"Pelvis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tmi.2022.3225667","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2022.3225667","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:36449590","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36449590","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2690246104","display_name":null,"funder_award_id":"62131015","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5799702300","display_name":null,"funder_award_id":"21010502600","funder_id":"https://openalex.org/F4320321885","funder_display_name":"Science and Technology Commission of Shanghai Municipality"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321885","display_name":"Science and Technology Commission of Shanghai Municipality","ror":"https://ror.org/03kt66j61"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":67,"referenced_works":["https://openalex.org/W855272188","https://openalex.org/W1901129140","https://openalex.org/W1966633360","https://openalex.org/W1976670047","https://openalex.org/W2071574906","https://openalex.org/W2081457097","https://openalex.org/W2086255649","https://openalex.org/W2104795754","https://openalex.org/W2135535334","https://openalex.org/W2143931888","https://openalex.org/W2150410007","https://openalex.org/W2285190206","https://openalex.org/W2294370754","https://openalex.org/W2398213711","https://openalex.org/W2533800772","https://openalex.org/W2579357550","https://openalex.org/W2592929672","https://openalex.org/W2608353599","https://openalex.org/W2608854843","https://openalex.org/W2618237340","https://openalex.org/W2771252144","https://openalex.org/W2791680898","https://openalex.org/W2810111483","https://openalex.org/W2884436604","https://openalex.org/W2910094941","https://openalex.org/W2911982216","https://openalex.org/W2914016683","https://openalex.org/W2919115771","https://openalex.org/W2923425487","https://openalex.org/W2933796343","https://openalex.org/W2962914239","https://openalex.org/W2963959402","https://openalex.org/W2964184998","https://openalex.org/W2964950992","https://openalex.org/W2966434031","https://openalex.org/W2979796099","https://openalex.org/W2980204380","https://openalex.org/W2982043723","https://openalex.org/W2998663558","https://openalex.org/W3011247739","https://openalex.org/W3023289764","https://openalex.org/W3034438741","https://openalex.org/W3035367255","https://openalex.org/W3040717749","https://openalex.org/W3087574207","https://openalex.org/W3092411102","https://openalex.org/W3092540957","https://openalex.org/W3094669061","https://openalex.org/W3103214320","https://openalex.org/W3108860939","https://openalex.org/W3112667527","https://openalex.org/W3158290426","https://openalex.org/W3172681723","https://openalex.org/W3174708193","https://openalex.org/W3176031707","https://openalex.org/W3176603176","https://openalex.org/W3204255739","https://openalex.org/W4210882008","https://openalex.org/W4295915981","https://openalex.org/W6602259522","https://openalex.org/W6631190155","https://openalex.org/W6631943919","https://openalex.org/W6684191040","https://openalex.org/W6750469568","https://openalex.org/W6761292208","https://openalex.org/W6766978945","https://openalex.org/W6795495086"],"related_works":["https://openalex.org/W4379231730","https://openalex.org/W4389858081","https://openalex.org/W4324315429","https://openalex.org/W2501551404","https://openalex.org/W4385583601","https://openalex.org/W2113201962","https://openalex.org/W4298131179","https://openalex.org/W2799953226","https://openalex.org/W4366343436","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Accurate":[0],"bowel":[1,10,16,59,115,120,134,141,144,148,219],"segmentation":[2,60,135,149,163,170],"is":[3,20],"essential":[4],"for":[5,146],"diagnosis":[6],"and":[7,30,76,99,117,137,143,193,202],"treatment":[8],"of":[9,58,67,73,82,108,188,210],"cancers.":[11],"Unfortunately,":[12],"segmenting":[13,79,196,216],"the":[14,40,55,74,83,87,109,123,197,208,217],"entire":[15,218],"in":[17,61,86,122,150,195,215],"CT":[18,62,101,178,221],"images":[19,102],"quite":[21],"challenging":[22,56],"due":[23],"to":[24,53,103,128,159,168],"unclear":[25,114],"boundary,":[26],"large":[27,176],"shape,":[28],"size,":[29],"appearance":[31],"variations,":[32],"as":[33,35],"well":[34],"diverse":[36],"filling":[37],"status":[38],"within":[39],"bowel.":[41,84,110],"In":[42],"this":[43],"paper,":[44],"we":[45,90,126,156],"present":[46],"a":[47,92,151,161,175],"novel":[48],"two-stage":[49],"framework,":[50],"named":[51],"BowelNet,":[52],"handle":[54],"task":[57],"images,":[63],"with":[64],"two":[65],"stages":[66],"1)":[68],"jointly":[69,129],"localizing":[70],"all":[71,106],"types":[72,107],"bowel,":[75],"2)":[77],"finely":[78],"each":[80],"type":[81],"Specifically,":[85],"first":[88],"stage,":[89,125],"learn":[91,118,130,160],"unified":[93],"localization":[94],"network":[95,164],"from":[96,220],"both":[97],"partially-":[98],"fully-labeled":[100],"robustly":[104],"detect":[105],"To":[111],"better":[112],"capture":[113],"boundary":[116,142],"complex":[119],"shapes,":[121],"second":[124],"propose":[127,158],"semantic":[131],"information":[132],"(i.e.,":[133,140],"mask)":[136],"geometric":[138],"representations":[139],"skeleton)":[145],"fine":[147],"multi-task":[152],"learning":[153],"scheme.":[154],"Moreover,":[155],"further":[157],"meta":[162],"via":[165],"pseudo":[166],"labels":[167],"improve":[169],"accuracy.":[171],"By":[172],"evaluating":[173],"on":[174],"abdominal":[177],"dataset,":[179],"our":[180,211],"proposed":[181,212],"BowelNet":[182,213],"method":[183],"can":[184],"achieve":[185],"Dice":[186],"scores":[187],"0.764,":[189],"0.848,":[190],"0.835,":[191],"0.774,":[192],"0.824":[194],"duodenum,":[198],"jejunum-ileum,":[199],"colon,":[200],"sigmoid,":[201],"rectum,":[203],"respectively.":[204],"These":[205],"results":[206],"demonstrate":[207],"effectiveness":[209],"framework":[214],"images.":[222]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
