{"id":"https://openalex.org/W2966895632","doi":"https://doi.org/10.1109/tmi.2019.2933656","title":"Cytokeratin-Supervised Deep Learning for Automatic Recognition of Epithelial Cells in Breast Cancers Stained for ER, PR, and Ki-67","display_name":"Cytokeratin-Supervised Deep Learning for Automatic Recognition of Epithelial Cells in Breast Cancers Stained for ER, PR, and Ki-67","publication_year":2019,"publication_date":"2019-08-08","ids":{"openalex":"https://openalex.org/W2966895632","doi":"https://doi.org/10.1109/tmi.2019.2933656","mag":"2966895632","pmid":"https://pubmed.ncbi.nlm.nih.gov/31398111"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2019.2933656","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2019.2933656","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036723157","display_name":"Mira Valkonen","orcid":null},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Mira Valkonen","raw_affiliation_strings":["Faculty of Medicine and Health Technology, Tampere University, Finland"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health Technology, Tampere University, Finland","institution_ids":["https://openalex.org/I166825849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068108014","display_name":"Jorma Isola","orcid":"https://orcid.org/0000-0002-0849-5939"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jorma Isola","raw_affiliation_strings":["Faculty of Medicine and Health Technology, Tampere University, Finland","Jilab Inc"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health Technology, Tampere University, Finland","institution_ids":["https://openalex.org/I166825849"]},{"raw_affiliation_string":"Jilab Inc","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000198174","display_name":"Onni Ylinen","orcid":null},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Onni Ylinen","raw_affiliation_strings":["Faculty of Medicine and Health Technology, Tampere University, Finland","Jilab Inc"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health Technology, Tampere University, Finland","institution_ids":["https://openalex.org/I166825849"]},{"raw_affiliation_string":"Jilab Inc","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009520936","display_name":"Ville Muhonen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ville Muhonen","raw_affiliation_strings":["Jilab Inc., Tampere, Finland"],"affiliations":[{"raw_affiliation_string":"Jilab Inc., Tampere, Finland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110548977","display_name":"Anna Saxlin","orcid":null},"institutions":[{"id":"https://openalex.org/I4210133601","display_name":"Fimlab (Finland)","ror":"https://ror.org/031y6w871","country_code":"FI","type":"company","lineage":["https://openalex.org/I4210133601"]},{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I4210126318","display_name":"Tampere University Hospital","ror":"https://ror.org/02hvt5f17","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I4210126318"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Anna Saxlin","raw_affiliation_strings":["Department of Pathology, Fimlab Laboratories, Tampere University Hospital, Tampere, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Fimlab Laboratories, Tampere University Hospital, Tampere, Finland","institution_ids":["https://openalex.org/I4210133601","https://openalex.org/I4210133110","https://openalex.org/I4210126318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045650309","display_name":"Teemu Tolonen","orcid":"https://orcid.org/0000-0003-2029-6497"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]},{"id":"https://openalex.org/I4210126318","display_name":"Tampere University Hospital","ror":"https://ror.org/02hvt5f17","country_code":"FI","type":"healthcare","lineage":["https://openalex.org/I4210126318"]},{"id":"https://openalex.org/I4210133601","display_name":"Fimlab (Finland)","ror":"https://ror.org/031y6w871","country_code":"FI","type":"company","lineage":["https://openalex.org/I4210133601"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Teemu Tolonen","raw_affiliation_strings":["Department of Pathology, Fimlab Laboratories, Tampere University Hospital, Tampere, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Fimlab Laboratories, Tampere University Hospital, Tampere, Finland","institution_ids":["https://openalex.org/I4210133601","https://openalex.org/I4210133110","https://openalex.org/I4210126318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063194021","display_name":"Matti Nykter","orcid":"https://orcid.org/0000-0001-6956-2843"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Matti Nykter","raw_affiliation_strings":["Faculty of Medicine and Health Technology, Tampere University, Finland"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health Technology, Tampere University, Finland","institution_ids":["https://openalex.org/I166825849"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089033830","display_name":"Pekka Ruusuvuori","orcid":"https://orcid.org/0000-0001-9086-9591"},"institutions":[{"id":"https://openalex.org/I166825849","display_name":"Tampere University","ror":"https://ror.org/033003e23","country_code":"FI","type":"education","lineage":["https://openalex.org/I166825849"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Pekka Ruusuvuori","raw_affiliation_strings":["Faculty of Medicine and Health Technology, Tampere University, Finland"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine and Health Technology, Tampere University, Finland","institution_ids":["https://openalex.org/I166825849"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5036723157"],"corresponding_institution_ids":["https://openalex.org/I166825849"],"apc_list":null,"apc_paid":null,"fwci":4.6219,"has_fulltext":false,"cited_by_count":66,"citation_normalized_percentile":{"value":0.95818756,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"39","issue":"2","first_page":"534","last_page":"542"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12874","display_name":"Digital Imaging for Blood Diseases","score":0.9846000075340271,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cytokeratin","display_name":"Cytokeratin","score":0.7052647471427917},{"id":"https://openalex.org/keywords/immunohistochemistry","display_name":"Immunohistochemistry","score":0.595766544342041},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.584716796875},{"id":"https://openalex.org/keywords/ki-67","display_name":"Ki-67","score":0.5202654600143433},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.4782627820968628},{"id":"https://openalex.org/keywords/h-e-stain","display_name":"H&E stain","score":0.4474237561225891},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.4357483983039856},{"id":"https://openalex.org/keywords/proliferation-index","display_name":"Proliferation index","score":0.4213348627090454},{"id":"https://openalex.org/keywords/staining","display_name":"Staining","score":0.41729307174682617},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3891041874885559},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.33482539653778076},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3284333348274231},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.17695459723472595},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.1204630434513092}],"concepts":[{"id":"https://openalex.org/C2779012181","wikidata":"https://www.wikidata.org/wiki/Q2750567","display_name":"Cytokeratin","level":3,"score":0.7052647471427917},{"id":"https://openalex.org/C204232928","wikidata":"https://www.wikidata.org/wiki/Q899285","display_name":"Immunohistochemistry","level":2,"score":0.595766544342041},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.584716796875},{"id":"https://openalex.org/C2777751288","wikidata":"https://www.wikidata.org/wiki/Q409106","display_name":"Ki-67","level":3,"score":0.5202654600143433},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.4782627820968628},{"id":"https://openalex.org/C125473707","wikidata":"https://www.wikidata.org/wiki/Q9914","display_name":"H&E stain","level":3,"score":0.4474237561225891},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.4357483983039856},{"id":"https://openalex.org/C2910938049","wikidata":"https://www.wikidata.org/wiki/Q7249605","display_name":"Proliferation index","level":3,"score":0.4213348627090454},{"id":"https://openalex.org/C74864618","wikidata":"https://www.wikidata.org/wiki/Q2332446","display_name":"Staining","level":2,"score":0.41729307174682617},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3891041874885559},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.33482539653778076},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3284333348274231},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.17695459723472595},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1204630434513092}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004847","descriptor_name":"Epithelial Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004847","descriptor_name":"Epithelial Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004847","descriptor_name":"Epithelial Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007150","descriptor_name":"Immunohistochemistry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007633","descriptor_name":"Keratins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D007633","descriptor_name":"Keratins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D007633","descriptor_name":"Keratins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011980","descriptor_name":"Receptors, Progesterone","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011980","descriptor_name":"Receptors, Progesterone","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011980","descriptor_name":"Receptors, Progesterone","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D019394","descriptor_name":"Ki-67 Antigen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D019394","descriptor_name":"Ki-67 Antigen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D019394","descriptor_name":"Ki-67 Antigen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tmi.2019.2933656","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2019.2933656","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:31398111","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31398111","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.5699999928474426,"id":"https://metadata.un.org/sdg/16"}],"awards":[{"id":"https://openalex.org/G2701230536","display_name":null,"funder_award_id":"313921","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8704030575","display_name":null,"funder_award_id":"314558","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8763906283","display_name":null,"funder_award_id":"Dnro 269/31/2015","funder_id":"https://openalex.org/F4320328501","funder_display_name":"Business Finland"}],"funders":[{"id":"https://openalex.org/F4320311269","display_name":"KAUTE-S\u00e4\u00e4ti\u00f6","ror":"https://ror.org/00zwv5854"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320323337","display_name":"Tekniikan Edist\u00e4miss\u00e4\u00e4ti\u00f6","ror":"https://ror.org/03f420b93"},{"id":"https://openalex.org/F4320324148","display_name":"Orionin Tutkimuss\u00e4\u00e4ti\u00f6","ror":"https://ror.org/0296s4x19"},{"id":"https://openalex.org/F4320328501","display_name":"Business Finland","ror":"https://ror.org/05bgf9v38"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W1227759773","https://openalex.org/W1522301498","https://openalex.org/W1597336200","https://openalex.org/W1686810756","https://openalex.org/W2095705004","https://openalex.org/W2099540110","https://openalex.org/W2132893003","https://openalex.org/W2133554539","https://openalex.org/W2133665775","https://openalex.org/W2150134401","https://openalex.org/W2301358467","https://openalex.org/W2402144811","https://openalex.org/W2416490606","https://openalex.org/W2533800772","https://openalex.org/W2581082771","https://openalex.org/W2592929672","https://openalex.org/W2771828332","https://openalex.org/W2772723798","https://openalex.org/W2784905247","https://openalex.org/W2788633781","https://openalex.org/W2794803511","https://openalex.org/W2803571152","https://openalex.org/W2883567318","https://openalex.org/W2884988214","https://openalex.org/W2890039732","https://openalex.org/W2902140604","https://openalex.org/W2912717377","https://openalex.org/W2953384591","https://openalex.org/W2964121744","https://openalex.org/W6631190155","https://openalex.org/W6635816984","https://openalex.org/W6637373629","https://openalex.org/W6674330103","https://openalex.org/W6713134421","https://openalex.org/W6758698326"],"related_works":["https://openalex.org/W2065857975","https://openalex.org/W1989040839","https://openalex.org/W4386103331","https://openalex.org/W3012179402","https://openalex.org/W3214589972","https://openalex.org/W4214718886","https://openalex.org/W3174328103","https://openalex.org/W2042350842","https://openalex.org/W2617377136","https://openalex.org/W2400747471"],"abstract_inverted_index":{"Immunohistochemistry":[0],"(IHC)":[1],"of":[2,16,19,81,86,116,127,133,160,214],"ER,":[3],"PR,":[4],"and":[5,36,58,112,147,156,216],"Ki-67":[6,166],"are":[7],"routinely":[8],"used":[9],"assays":[10],"in":[11,149,230],"breast":[12,83,231],"cancer":[13,232],"diagnostics.":[14],"Determination":[15],"the":[17,87,105,117,140,165,196],"proportion":[18],"stained":[20,234],"cells":[21,129,229],"(labeling":[22],"index)":[23],"should":[24],"be":[25,224],"restricted":[26],"on":[27,164],"malignant":[28],"epithelial":[29,50,90,106,128,161,183,200,205],"cells,":[30],"carefully":[31],"avoiding":[32],"tumor":[33,172],"infiltrating":[34],"stroma":[35],"inflammatory":[37],"cells.":[38],"Here,":[39],"we":[40],"developed":[41],"a":[42],"deep":[43,68,197,221],"learning":[44,198,222],"based":[45,199],"digital":[46,89,204],"mask":[47],"for":[48],"automated":[49],"cell":[51,91,107,162,184,201,206],"detection":[52],"using":[53,74],"fluoro-chromogenic":[54],"cytokeratin-Ki-67":[55],"double":[56],"staining":[57,61],"sequential":[59],"hematoxylin-IHC":[60],"as":[62,139,176,188],"training":[63],"material.":[64],"A":[65,124],"partially":[66],"pre-trained":[67],"convolutional":[69],"neural":[70],"network":[71],"was":[72,93,130,169],"fine-tuned":[73],"image":[75],"batches":[76],"from":[77,99],"152":[78],"patient":[79],"samples":[80,233],"invasive":[82],"tumors.":[84],"Validity":[85],"trained":[88],"masks":[92,108,207],"studied":[94],"with":[95,151,235],"366":[96],"images":[97,111,119,173],"captured":[98],"98":[100],"unseen":[101],"samples,":[102],"by":[103,113,121],"comparing":[104],"to":[109,212,226],"cytokeratin":[110],"visual":[114,153],"evaluation":[115],"brightfield":[118,237],"performed":[120],"two":[122],"pathologists.":[123],"good":[125],"discrimination":[126],"achieved":[131],"(AUC":[132],"mean":[134,143],"ROC":[135],"=":[136],"0.93;":[137],"defined":[138],"area":[141],"under":[142],"receiver":[144],"operating":[145],"characteristics),":[146],"well":[148],"concordance":[150],"pathologists'":[152],"assessment":[154],"(4.01/5":[155],"4.67/5).":[157],"The":[158,203],"effect":[159],"masking":[163,185],"labeling":[167],"index":[168],"substantial.":[170],"52":[171],"initially":[174],"classified":[175],"low":[177],"proliferation":[178,190],"(Ki-67":[179,191],"<":[180],"14%)":[181,193],"without":[182],"were":[186,208],"re-classified":[187],"high":[189],"\u2265":[192],"after":[194],"applying":[195],"mask.":[202],"found":[209],"applicable":[210],"also":[211],"IHC":[213],"ER":[215],"PR.":[217],"We":[218],"conclude":[219],"that":[220],"can":[223],"applied":[225],"detect":[227],"carcinoma":[228],"conventional":[236],"IHC.":[238]},"counts_by_year":[{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":3}],"updated_date":"2026-03-05T09:29:38.588285","created_date":"2025-10-10T00:00:00"}
